You are here

Home

ATCC10864_011274-T1, ATCC10864_011274-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011274-T1
Unique NameATCC10864_011274-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000265:112481..113226+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011274-T1 ID=ATCC10864_011274-T1|Name=ATCC10864_011274-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=746bp|location=Sequence derived from alignment at MCQH01000265:112481..113226+ (Aspergillus niger ATCC 10864)
ATGCTCACCAAGAACCTTCTCCTCTGCTTTGCCGCGGCTAAGGCTGCTCT
GGCTGTTCCCCACGACTCTGTCGCCCAGCGTTCGGATGCCTTGCACATGC
TCTCTGAGCGCTCGACCCCGAGCTCGACCGGCGAGAACAACGGCTTCTAC
TACTCCTTCTGGACCGACGGCGGTGGCGACGTGACCTACACCAACGGAGA
TGCTGGTGCCTACACTGTTGAGTGGTCCAACGTGGGCAACTTTGTCGGTG
GAAAGGGCTGGAACCCCGGAAGTGCGCAGTAAGTTAATCATCCTCACACT
ATCTCTTTAAAGGATCCAATAAAACGATTACTCACATCATCTCCAGGGAC
ATCACCTACAGCGGCACCTTCACCCCTAGCGGCAACGGCTATCTCTCCGT
CTATGGCTGGACCACTGACCCCCTGATCGAGTACTACATCGTCGAGTCCT
ACGGCGACTACAACCCCGGCAGTGGAGGCACATACAAGGGCACCGTCACC
TCGGACGGATCCGTTTACGATATCTACACGGCTACCCGTACCAATGCTGC
TTCCATTCAGGGAACCGCTACCTTCACTCAGTACTGGTCCGTCCGCCAGA
ACAAGAGAGTTGGCGGAACTGTTACCACCTCCAACCACTTCAATGCTTGG
GCTAAGCTGGGAATGAACCTGGGTACTCACAACTACCAGATCGTGGCTAC
CGAGGGTTACCAGAGCAGTGGATCTTCGTCCATCACTGTTCAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000265:112481..113226+

>ATCC10864_011274-T1 ID=ATCC10864_011274-T1|Name=ATCC10864_011274-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1356bp|location=Sequence derived from alignment at MCQH01000265:112481..113226+ (Aspergillus niger ATCC 10864)
ATGCTCACCAAGAACCTTCTCCTCTGCTTTGCCGCGGCTAAGGCTGCTCT
GGCTGTTCCCCACGACTCTGTCGCCCAGCGTTCGGATGCCTTGCACATGC
TCTCTGAGCGCTCGACCCCGAGCTCGACCGGCGAGAACAACGGCTTCTAC
TACTCCTTCTGGACCGACGGCGGTGGCGACGTGACCTACACCAACGGAGA
TGCTGGTGCCTACACTGTTGAGTGGTCCAACGTGGGCAACTTTGTCGGTG
GAAAGGGCTGGAACCCCGGAAGTGCGCAGGACATCACCTACAGCGGCACC
TTCACCCCTAGCGGCAACGGCTATCTCTCCGTCTATGGCTGGACCACTGA
CCCCCTGATCGAGTACTACATCGTCGAGTCCTACGGCGACTACAACCCCG
GCAGTGGAGGCACATACAAGGGCACCGTCACCTCGGACGGATCCGTTTAC
GATATCTACACGGCTACCCGTACCAATGCTGCTTCCATTCAGGGAACCGC
TACCTTCACTCAGTACTGGTCCGTCCGCCAGAACAAGAGAGTTGGCGGAA
CTGTTACCACCTCCAACCACTTCAATGCTTGGGCTAAGCTGGGAATGAAC
CTGGGTACTCACAACTACCAGATCGTGGCTACCGAGGGTTACCAGAGCAG
TGGATCTTCGTCCATCACTGTTCAGTAAATGCTCACCAAGAACCTTCTCC
TCTGCTTTGCCGCGGCTAAGGCTGCTCTGGCTGTTCCCCACGACTCTGTC
GCCCAGCGTTCGGATGCCTTGCACATGCTCTCTGAGCGCTCGACCCCGAG
CTCGACCGGCGAGAACAACGGCTTCTACTACTCCTTCTGGACCGACGGCG
GTGGCGACGTGACCTACACCAACGGAGATGCTGGTGCCTACACTGTTGAG
TGGTCCAACGTGGGCAACTTTGTCGGTGGAAAGGGCTGGAACCCCGGAAG
TGCGCAGGACATCACCTACAGCGGCACCTTCACCCCTAGCGGCAACGGCT
ATCTCTCCGTCTATGGCTGGACCACTGACCCCCTGATCGAGTACTACATC
GTCGAGTCCTACGGCGACTACAACCCCGGCAGTGGAGGCACATACAAGGG
CACCGTCACCTCGGACGGATCCGTTTACGATATCTACACGGCTACCCGTA
CCAATGCTGCTTCCATTCAGGGAACCGCTACCTTCACTCAGTACTGGTCC
GTCCGCCAGAACAAGAGAGTTGGCGGAACTGTTACCACCTCCAACCACTT
CAATGCTTGGGCTAAGCTGGGAATGAACCTGGGTACTCACAACTACCAGA
TCGTGGCTACCGAGGGTTACCAGAGCAGTGGATCTTCGTCCATCACTGTT
CAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011274ATCC10864_011274Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011274-T1.exon1ATCC10864_011274-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011274-T1.exon2ATCC10864_011274-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011274-T1.cdsATCC10864_011274-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011274-T1ATCC10864_011274-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013319
PFAMPF00457
InterProIPR033119
InterProIPR013320
InterProIPR018208
InterProIPR033123
InterProIPR001137
Properties
Property NameValue
NoteCAZy:GH11
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000265supercontigMCQH01000265:112481..113226 +
Powered by Drupal