You are here

Home

ATCC10864_011285-T1, ATCC10864_011285-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011285-T1
Unique NameATCC10864_011285-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000270:3523..4136+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011285-T1 ID=ATCC10864_011285-T1|Name=ATCC10864_011285-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=614bp|location=Sequence derived from alignment at MCQH01000270:3523..4136+ (Aspergillus niger ATCC 10864)
ATGGCGTCAACATCAGATGTGCACGGTTCTTCTCCTGTGCCAACCCTGCC
CCAGCCCAACGACAACGGTCGTTCGCACATGTCCTCCCTCTCATCATCCT
CCTCCATCTCCGACGCCGAAACCGAACGTAGAGGTCGTTCAGAGAGACCT
CGCATGGCCAGTCGGAAACCGAGTGCCTCAATACTAGTTCCACGGGATCA
TCCTGAAATCGAAATCGAGGAAGAAGAATTCCCCCCTGACGACGCACGCG
CCATGAGTCCTCGACGCAACTCGGCTGATTTGGAGCGACTGGGCAAGGAA
GCCAGGCAAACACTACAAGAGTGAGTAGTTGAATGACAAACTTTCCCCGA
AACCTCTGGCCAAGTGACGCCAGAGACAAAAGAAAAGAGGGAAGAAGCGA
TGCTAATGTGTTACGTGTTCACGGCAGACAAGCCAAGGCTCTCCAGTCGT
CCCTTCAGGCGCTCGCCGAACGTATCGAAGCCGTCAAATCCGACCATGAT
AAGCTCGAAAGCGAGAACCGGTTCCTTCAAGACTACATCGGTGGATTAAC
CCGCAACATGACCAAGAGCGAAATGACAAGGAGTAGCACCAAGGTCAAAA
AGTCGCAGAAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000270:3523..4136+

>ATCC10864_011285-T1 ID=ATCC10864_011285-T1|Name=ATCC10864_011285-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1014bp|location=Sequence derived from alignment at MCQH01000270:3523..4136+ (Aspergillus niger ATCC 10864)
ATGGCGTCAACATCAGATGTGCACGGTTCTTCTCCTGTGCCAACCCTGCC
CCAGCCCAACGACAACGGTCGTTCGCACATGTCCTCCCTCTCATCATCCT
CCTCCATCTCCGACGCCGAAACCGAACGTAGAGGTCGTTCAGAGAGACCT
CGCATGGCCAGTCGGAAACCGAGTGCCTCAATACTAGTTCCACGGGATCA
TCCTGAAATCGAAATCGAGGAAGAAGAATTCCCCCCTGACGACGCACGCG
CCATGAGTCCTCGACGCAACTCGGCTGATTTGGAGCGACTGGGCAAGGAA
GCCAGGCAAACACTACAAGAACAAGCCAAGGCTCTCCAGTCGTCCCTTCA
GGCGCTCGCCGAACGTATCGAAGCCGTCAAATCCGACCATGATAAGCTCG
AAAGCGAGAACCGGTTCCTTCAAGACTACATCGGTGGATTAACCCGCAAC
ATGACCAAGAGCGAAATGACAAGGAGTAGCACCAAGGTCAAAAAGTCGCA
GAAATAGATGGCGTCAACATCAGATGTGCACGGTTCTTCTCCTGTGCCAA
CCCTGCCCCAGCCCAACGACAACGGTCGTTCGCACATGTCCTCCCTCTCA
TCATCCTCCTCCATCTCCGACGCCGAAACCGAACGTAGAGGTCGTTCAGA
GAGACCTCGCATGGCCAGTCGGAAACCGAGTGCCTCAATACTAGTTCCAC
GGGATCATCCTGAAATCGAAATCGAGGAAGAAGAATTCCCCCCTGACGAC
GCACGCGCCATGAGTCCTCGACGCAACTCGGCTGATTTGGAGCGACTGGG
CAAGGAAGCCAGGCAAACACTACAAGAACAAGCCAAGGCTCTCCAGTCGT
CCCTTCAGGCGCTCGCCGAACGTATCGAAGCCGTCAAATCCGACCATGAT
AAGCTCGAAAGCGAGAACCGGTTCCTTCAAGACTACATCGGTGGATTAAC
CCGCAACATGACCAAGAGCGAAATGACAAGGAGTAGCACCAAGGTCAAAA
AGTCGCAGAAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011285ATCC10864_011285Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011285-T1.exon1ATCC10864_011285-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011285-T1.exon2ATCC10864_011285-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011285-T1.cdsATCC10864_011285-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011285-T1ATCC10864_011285-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF10224
InterProIPR019357
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000270supercontigMCQH01000270:3523..4136 +
Powered by Drupal