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ATCC10864_011288-T1, ATCC10864_011288-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011288-T1
Unique NameATCC10864_011288-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000270:12989..15204-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011288-T1 ID=ATCC10864_011288-T1|Name=ATCC10864_011288-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2216bp|location=Sequence derived from alignment at MCQH01000270:12989..15204- (Aspergillus niger ATCC 10864)
ATGTCCAACCTCTTTTCTTTCGACTCGGCCCCTGGCGGCGCGAACAAGGG
GGGTCTTTTTGGATCTGGTGCCACGAACACTGGCTCTAGCGCTGGCTCGG
GCACACTCTTTGGAAACGTAGGTGCTCCGACGAGCGGCACTTCTTCGCCT
TCTTTGTTCGGGGGCGCAGCTGGCAGTGGAACTGGAGCGGGTACTGGTAC
TTCGTCGCCTTTCAGTTTCGGAGCTCAGAGCAAGCCGGGGGCCACCAGTC
AGACACCGTTGTTCGGCAACGCATCACAGACTCCCAACAAGTCGACCGAA
GCTGGTAGCTCAGGGCAAACAGCTACGAGCGGACTCTTTGGCAATGCCGC
AAAGCCTGCAGGGGGCCTCTTTGGCAACGCTACTTCTACGCCCGGTCAAA
CAGGAGGTTCTTTGTTCGGCAATGCCTCGTCCACAACGCCCGCCGGTCCT
CCTCCGCAGGGCGCGACTGGCCAGACGCAGACGCTCTTTGGACAGGCAGC
ACAAAAGCCTGGCGGTCTCTTCGGAAACGTGAACTCGACCACCTCGACTA
CCTCGACCACCTCATCGGCTGCCCCGTCGTCTACTACCGCTACAGCCCCC
GCCACCACTACCCCGTCGCTGTTCGGAAACGCCAACACAAACACCACAAC
CTCTACCTCCAACACTACGCAACAGCCATCAACTGGGGGTCTCTTCGGTG
GGGCGAACACAGCGCAGAAACCTCTCTTTGGTACCAATCCGGCGCCTTCT
ACGGGAAATAGCCTGTTCGGAAACGCCAAACCGGCCGCACCAAGCACCAA
TGACAGCACTCCAAACACCCTCTTTGGAAAGGCACCGGGGGCACCGTCAA
CGACGACAACCCCGGCCACAGGAGGAGGAGCTGGTGCGCAGACATCTTCT
CTCTTCAAAGCCCCAGCATCTGGAGCTGATGCCACCAAGCCAGTCTTCCC
CTCTCTGGGCACTCCGTCCTCGACCCCTCAAACCTCTACGACGCCAGCTG
CCTCGTCCGCTGCGCCACAGACTTCCTCTCTTTTCCCAGCCCTAGGTGGA
GCGTCCTCGTCCGCGACTCCATCATCAACACCCGCTCCCTCTGGAGGCTT
GTTTGGCGGTGCCCTCGGTGGCGCTAAGTCCACAGCAACCACCGCTCCCG
CCACTACAGCTACCGCAGCTCCCGCGACACAACCTGCGGCAGCCACCGGC
GGCCTGTTCGGTAAGCCCGCGGAGACCACCCCGTCCACACAGCCAGCCAG
CACTGCTGCTGGAGCCTCTGCTACGACGGCTGGCGACAAGCCCACCCTGA
CCGCTACCTCTGGCGCCACCTCTTCAGCTACCACCGGTACAGCAGGCGCA
ACAGGCACAACCACCGCCACTGGCGGAATTGGCCTTGGTGCCTCGACTGC
TGGACCGACTCCTCCGGCGCAGTCCCGCCTGAAGAACAAGACCATGGATG
AGATCATCACCCGGTGGGCGACTGATCTGACCAAGTACCAGAAGGACTTC
CGCGAGCAAGCCGAGAAGGTAGCAGAATGGGATCGGATGCTGGTTGAGAA
CGGCACCAAGGTGCAGAAACTGTACGGCAGCACGGTGGATGCTGAGCGCG
CGACTCAAGAAGTCGAGCGTCAGCTGGCGTCCGTCGAGGGCCAGCAGGAA
GAGCTCAGCTCCTGGCTCGACCGGTACGAGCGTGAAGTGGACGAGATGAT
TTCCAAGCAAGTCGGACCGGGTGAAACTCTGCAGGGACCTGACCAGGAGC
GTGAACGGACGTATGTTATTCCCATCCAACAATTATCCTTTGATCTCTCG
GTATGCTAACAGGATTACTAAAACAGATACAAAATGGCCGAGAAGCTCTC
CGAGCGCCTGGACGAAATGGGCAAGGATCTGACAAGCATGATTGAGGAAG
TCAACGGCGCGTCCTCGACTCTCAGCAAGACGAACAAGGCTGACGAGCCG
GTACGTATCCCCTTCTCCCCAAGATCCTTAAAGCTTATGCTAATGTATAC
CATGAATAGATCTCGCAAATCGTCCGCATCCTCAACTCCCACCTCGCGCA
ACTGCAGGTCATCGACCAAGGCACCACGGAGCTCCAGGCCAAGGTCGACG
CCGCACAGAAGGCCGGCCAGTCCCTCTCTTCGCGGTTCGGGTATGGTCTG
GGTAGCTCTAGTGTGGGCGGTAGTGCCGCAGATGATTTCTATCGCTCTTA
CATGGGACGTCGCTAG
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Coding sequence (CDS) from alignment at MCQH01000270:12989..15204-

>ATCC10864_011288-T1 ID=ATCC10864_011288-T1|Name=ATCC10864_011288-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6273bp|location=Sequence derived from alignment at MCQH01000270:12989..15204- (Aspergillus niger ATCC 10864)
ATCTCGCAAATCGTCCGCATCCTCAACTCCCACCTCGCGCAACTGCAGGT
CATCGACCAAGGCACCACGGAGCTCCAGGCCAAGGTCGACGCCGCACAGA
AGGCCGGCCAGTCCCTCTCTTCGCGGTTCGGGTATGGTCTGGGTAGCTCT
AGTGTGGGCGGTAGTGCCGCAGATGATTTCTATCGCTCTTACATGGGACG
TCGCTAGATACAAAATGGCCGAGAAGCTCTCCGAGCGCCTGGACGAAATG
GGCAAGGATCTGACAAGCATGATTGAGGAAGTCAACGGCGCGTCCTCGAC
TCTCAGCAAGACGAACAAGGCTGACGAGCCGATGTCCAACCTCTTTTCTT
TCGACTCGGCCCCTGGCGGCGCGAACAAGGGGGGTCTTTTTGGATCTGGT
GCCACGAACACTGGCTCTAGCGCTGGCTCGGGCACACTCTTTGGAAACGT
AGGTGCTCCGACGAGCGGCACTTCTTCGCCTTCTTTGTTCGGGGGCGCAG
CTGGCAGTGGAACTGGAGCGGGTACTGGTACTTCGTCGCCTTTCAGTTTC
GGAGCTCAGAGCAAGCCGGGGGCCACCAGTCAGACACCGTTGTTCGGCAA
CGCATCACAGACTCCCAACAAGTCGACCGAAGCTGGTAGCTCAGGGCAAA
CAGCTACGAGCGGACTCTTTGGCAATGCCGCAAAGCCTGCAGGGGGCCTC
TTTGGCAACGCTACTTCTACGCCCGGTCAAACAGGAGGTTCTTTGTTCGG
CAATGCCTCGTCCACAACGCCCGCCGGTCCTCCTCCGCAGGGCGCGACTG
GCCAGACGCAGACGCTCTTTGGACAGGCAGCACAAAAGCCTGGCGGTCTC
TTCGGAAACGTGAACTCGACCACCTCGACTACCTCGACCACCTCATCGGC
TGCCCCGTCGTCTACTACCGCTACAGCCCCCGCCACCACTACCCCGTCGC
TGTTCGGAAACGCCAACACAAACACCACAACCTCTACCTCCAACACTACG
CAACAGCCATCAACTGGGGGTCTCTTCGGTGGGGCGAACACAGCGCAGAA
ACCTCTCTTTGGTACCAATCCGGCGCCTTCTACGGGAAATAGCCTGTTCG
GAAACGCCAAACCGGCCGCACCAAGCACCAATGACAGCACTCCAAACACC
CTCTTTGGAAAGGCACCGGGGGCACCGTCAACGACGACAACCCCGGCCAC
AGGAGGAGGAGCTGGTGCGCAGACATCTTCTCTCTTCAAAGCCCCAGCAT
CTGGAGCTGATGCCACCAAGCCAGTCTTCCCCTCTCTGGGCACTCCGTCC
TCGACCCCTCAAACCTCTACGACGCCAGCTGCCTCGTCCGCTGCGCCACA
GACTTCCTCTCTTTTCCCAGCCCTAGGTGGAGCGTCCTCGTCCGCGACTC
CATCATCAACACCCGCTCCCTCTGGAGGCTTGTTTGGCGGTGCCCTCGGT
GGCGCTAAGTCCACAGCAACCACCGCTCCCGCCACTACAGCTACCGCAGC
TCCCGCGACACAACCTGCGGCAGCCACCGGCGGCCTGTTCGGTAAGCCCG
CGGAGACCACCCCGTCCACACAGCCAGCCAGCACTGCTGCTGGAGCCTCT
GCTACGACGGCTGGCGACAAGCCCACCCTGACCGCTACCTCTGGCGCCAC
CTCTTCAGCTACCACCGGTACAGCAGGCGCAACAGGCACAACCACCGCCA
CTGGCGGAATTGGCCTTGGTGCCTCGACTGCTGGACCGACTCCTCCGGCG
CAGTCCCGCCTGAAGAACAAGACCATGGATGAGATCATCACCCGGTGGGC
GACTGATCTGACCAAGTACCAGAAGGACTTCCGCGAGCAAGCCGAGAAGG
TAGCAGAATGGGATCGGATGCTGGTTGAGAACGGCACCAAGGTGCAGAAA
CTGTACGGCAGCACGGTGGATGCTGAGCGCGCGACTCAAGAAGTCGAGCG
TCAGCTGGCGTCCGTCGAGGGCCAGCAGGAAGAGCTCAGCTCCTGGCTCG
ACCGGTACGAGCGTGAAGTGGACGAGATGATTTCCAAGCAAGTCGGACCG
GGTGAAACTCTGCAGGGACCTGACCAGGAGCGTGAACGGACATCTCGCAA
ATCGTCCGCATCCTCAACTCCCACCTCGCGCAACTGCAGGTCATCGACCA
AGGCACCACGGAGCTCCAGGCCAAGGTCGACGCCGCACAGAAGGCCGGCC
AGTCCCTCTCTTCGCGGTTCGGGTATGGTCTGGGTAGCTCTAGTGTGGGC
GGTAGTGCCGCAGATGATTTCTATCGCTCTTACATGGGACGTCGCTAGAT
ACAAAATGGCCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAGGAT
CTGACAAGCATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAGCAA
GACGAACAAGGCTGACGAGCCGATGTCCAACCTCTTTTCTTTCGACTCGG
CCCCTGGCGGCGCGAACAAGGGGGGTCTTTTTGGATCTGGTGCCACGAAC
ACTGGCTCTAGCGCTGGCTCGGGCACACTCTTTGGAAACGTAGGTGCTCC
GACGAGCGGCACTTCTTCGCCTTCTTTGTTCGGGGGCGCAGCTGGCAGTG
GAACTGGAGCGGGTACTGGTACTTCGTCGCCTTTCAGTTTCGGAGCTCAG
AGCAAGCCGGGGGCCACCAGTCAGACACCGTTGTTCGGCAACGCATCACA
GACTCCCAACAAGTCGACCGAAGCTGGTAGCTCAGGGCAAACAGCTACGA
GCGGACTCTTTGGCAATGCCGCAAAGCCTGCAGGGGGCCTCTTTGGCAAC
GCTACTTCTACGCCCGGTCAAACAGGAGGTTCTTTGTTCGGCAATGCCTC
GTCCACAACGCCCGCCGGTCCTCCTCCGCAGGGCGCGACTGGCCAGACGC
AGACGCTCTTTGGACAGGCAGCACAAAAGCCTGGCGGTCTCTTCGGAAAC
GTGAACTCGACCACCTCGACTACCTCGACCACCTCATCGGCTGCCCCGTC
GTCTACTACCGCTACAGCCCCCGCCACCACTACCCCGTCGCTGTTCGGAA
ACGCCAACACAAACACCACAACCTCTACCTCCAACACTACGCAACAGCCA
TCAACTGGGGGTCTCTTCGGTGGGGCGAACACAGCGCAGAAACCTCTCTT
TGGTACCAATCCGGCGCCTTCTACGGGAAATAGCCTGTTCGGAAACGCCA
AACCGGCCGCACCAAGCACCAATGACAGCACTCCAAACACCCTCTTTGGA
AAGGCACCGGGGGCACCGTCAACGACGACAACCCCGGCCACAGGAGGAGG
AGCTGGTGCGCAGACATCTTCTCTCTTCAAAGCCCCAGCATCTGGAGCTG
ATGCCACCAAGCCAGTCTTCCCCTCTCTGGGCACTCCGTCCTCGACCCCT
CAAACCTCTACGACGCCAGCTGCCTCGTCCGCTGCGCCACAGACTTCCTC
TCTTTTCCCAGCCCTAGGTGGAGCGTCCTCGTCCGCGACTCCATCATCAA
CACCCGCTCCCTCTGGAGGCTTGTTTGGCGGTGCCCTCGGTGGCGCTAAG
TCCACAGCAACCACCGCTCCCGCCACTACAGCTACCGCAGCTCCCGCGAC
ACAACCTGCGGCAGCCACCGGCGGCCTGTTCGGTAAGCCCGCGGAGACCA
CCCCGTCCACACAGCCAGCCAGCACTGCTGCTGGAGCCTCTGCTACGACG
GCTGGCGACAAGCCCACCCTGACCGCTACCTCTGGCGCCACCTCTTCAGC
TACCACCGGTACAGCAGGCGCAACAGGCACAACCACCGCCACTGGCGGAA
TTGGCCTTGGTGCCTCGACTGCTGGACCGACTCCTCCGGCGCAGTCCCGC
CTGAAGAACAAGACCATGGATGAGATCATCACCCGGTGGGCGACTGATCT
GACCAAGTACCAGAAGGACTTCCGCGAGCAAGCCGAGAAGGTAGCAGAAT
GGGATCGGATGCTGGTTGAGAACGGCACCAAGGTGCAGAAACTGTACGGC
AGCACGGTGGATGCTGAGCGCGCGACTCAAGAAGTCGAGCGTCAGCTGGC
GTCCGTCGAGGGCCAGCAGGAAGAGCTCAGCTCCTGGCTCGACCGGTACG
AGCGTGAAGTGGACGAGATGATTTCCAAGCAAGTCGGACCGGGTGAAACT
CTGCAGGGACCTGACCAGGAGCGTGAACGGACATCTCGCAAATCGTCCGC
ATCCTCAACTCCCACCTCGCGCAACTGCAGGTCATCGACCAAGGCACCAC
GGAGCTCCAGGCCAAGGTCGACGCCGCACAGAAGGCCGGCCAGTCCCTCT
CTTCGCGGTTCGGGTATGGTCTGGGTAGCTCTAGTGTGGGCGGTAGTGCC
GCAGATGATTTCTATCGCTCTTACATGGGACGTCGCTAGATACAAAATGG
CCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAGGATCTGACAAGC
ATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAGCAAGACGAACAA
GGCTGACGAGCCGATGTCCAACCTCTTTTCTTTCGACTCGGCCCCTGGCG
GCGCGAACAAGGGGGGTCTTTTTGGATCTGGTGCCACGAACACTGGCTCT
AGCGCTGGCTCGGGCACACTCTTTGGAAACGTAGGTGCTCCGACGAGCGG
CACTTCTTCGCCTTCTTTGTTCGGGGGCGCAGCTGGCAGTGGAACTGGAG
CGGGTACTGGTACTTCGTCGCCTTTCAGTTTCGGAGCTCAGAGCAAGCCG
GGGGCCACCAGTCAGACACCGTTGTTCGGCAACGCATCACAGACTCCCAA
CAAGTCGACCGAAGCTGGTAGCTCAGGGCAAACAGCTACGAGCGGACTCT
TTGGCAATGCCGCAAAGCCTGCAGGGGGCCTCTTTGGCAACGCTACTTCT
ACGCCCGGTCAAACAGGAGGTTCTTTGTTCGGCAATGCCTCGTCCACAAC
GCCCGCCGGTCCTCCTCCGCAGGGCGCGACTGGCCAGACGCAGACGCTCT
TTGGACAGGCAGCACAAAAGCCTGGCGGTCTCTTCGGAAACGTGAACTCG
ACCACCTCGACTACCTCGACCACCTCATCGGCTGCCCCGTCGTCTACTAC
CGCTACAGCCCCCGCCACCACTACCCCGTCGCTGTTCGGAAACGCCAACA
CAAACACCACAACCTCTACCTCCAACACTACGCAACAGCCATCAACTGGG
GGTCTCTTCGGTGGGGCGAACACAGCGCAGAAACCTCTCTTTGGTACCAA
TCCGGCGCCTTCTACGGGAAATAGCCTGTTCGGAAACGCCAAACCGGCCG
CACCAAGCACCAATGACAGCACTCCAAACACCCTCTTTGGAAAGGCACCG
GGGGCACCGTCAACGACGACAACCCCGGCCACAGGAGGAGGAGCTGGTGC
GCAGACATCTTCTCTCTTCAAAGCCCCAGCATCTGGAGCTGATGCCACCA
AGCCAGTCTTCCCCTCTCTGGGCACTCCGTCCTCGACCCCTCAAACCTCT
ACGACGCCAGCTGCCTCGTCCGCTGCGCCACAGACTTCCTCTCTTTTCCC
AGCCCTAGGTGGAGCGTCCTCGTCCGCGACTCCATCATCAACACCCGCTC
CCTCTGGAGGCTTGTTTGGCGGTGCCCTCGGTGGCGCTAAGTCCACAGCA
ACCACCGCTCCCGCCACTACAGCTACCGCAGCTCCCGCGACACAACCTGC
GGCAGCCACCGGCGGCCTGTTCGGTAAGCCCGCGGAGACCACCCCGTCCA
CACAGCCAGCCAGCACTGCTGCTGGAGCCTCTGCTACGACGGCTGGCGAC
AAGCCCACCCTGACCGCTACCTCTGGCGCCACCTCTTCAGCTACCACCGG
TACAGCAGGCGCAACAGGCACAACCACCGCCACTGGCGGAATTGGCCTTG
GTGCCTCGACTGCTGGACCGACTCCTCCGGCGCAGTCCCGCCTGAAGAAC
AAGACCATGGATGAGATCATCACCCGGTGGGCGACTGATCTGACCAAGTA
CCAGAAGGACTTCCGCGAGCAAGCCGAGAAGGTAGCAGAATGGGATCGGA
TGCTGGTTGAGAACGGCACCAAGGTGCAGAAACTGTACGGCAGCACGGTG
GATGCTGAGCGCGCGACTCAAGAAGTCGAGCGTCAGCTGGCGTCCGTCGA
GGGCCAGCAGGAAGAGCTCAGCTCCTGGCTCGACCGGTACGAGCGTGAAG
TGGACGAGATGATTTCCAAGCAAGTCGGACCGGGTGAAACTCTGCAGGGA
CCTGACCAGGAGCGTGAACGGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005643nuclear pore
Vocabulary: Molecular Function
TermDefinition
GO:0017056structural constituent of nuclear pore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011288ATCC10864_011288Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011288-T1ATCC10864_011288-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011288-T1.cdsATCC10864_011288-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011288-T1.exon3ATCC10864_011288-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011288-T1.exon2ATCC10864_011288-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011288-T1.exon1ATCC10864_011288-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007758
InterProIPR026010
PFAMPF13634
PFAMPF05064
InterProIPR025574
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000270supercontigMCQH01000270:12989..15204 -
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