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ATCC10864_011310-T1, ATCC10864_011310-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011310-T1
Unique NameATCC10864_011310-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000271:23565..24868+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011310-T1 ID=ATCC10864_011310-T1|Name=ATCC10864_011310-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1304bp|location=Sequence derived from alignment at MCQH01000271:23565..24868+ (Aspergillus niger ATCC 10864)
ATGGCTCCCATCAAGTCCATCGAGTACTTTCGCGTCAAGCCGCGCTGGCT
TTTCGTCAAGGTGACGGATAGCGAAGATAAATTTGGGTGGGGTGAGGCTA
CACTTGAGGGGCATACGCAGGCTGTGGAGGGTGCGTTGGATGAGATTATA
GGGAGGATTGTTGGTTATGAGGCTGAGTATGTTTTTTCTATTCCCATGAA
TTCCGGCTGCCTTGGTGCTAATGGCGCAGTGACATCGAGCACGTCTGGCA
GACAATTTGGAGACTTAGCTTCTATCGCGGCGGTCCGGTTTTCATGTCCG
CCTTGTCGGGCATTGATATCGCGTTGTGGGACTTGAAAGGTCGGAGGTTG
AACGTACCCGTCTACCAGCTTCTCGGCGGCAAGGTACGCAACAAGGTTCA
AGTTTATGCTTGGATTGGAGGTGACCGGCCAAGTGATGTTGAAGTAGCTG
CGTAAGTCACTTCCCATCTGCTTCTCTTTCATTCATCTAACAGTACCCAG
CAAGGCCCGTATCGCGCAGGGCCTCAAGTGCGTTAAGATGAATGCTACAG
AGGATATGAACTGGCTGGACTCGCCATCTGTACTAGACTCTTGCATCGAG
CGCATCAAACAGGTCAAGGCTCTTGGTCTTGATGCTGGCCTTGATTTCCA
CGGCCGTCTACATCGCCCCATGGCAAAGCAGCTTGCGAAAGCACTTGAAC
CTTACCGTCCTTTGTTTATTGAGGAGCCTTTGCTCGTTGAACACCCCGAA
GCTATCAAGCAGCTTTCTCAACACACGACTATTCCAATCGCATTTGGTGA
ACGTTTATATACTAGATGGGATGTTAAGCGGTTCCTCGAAGATGCGTCGG
TCGATGTGCTGCAGCCGGATATCGCGCATGCTGGTGGAATCTCAGAAACA
AAGCGCATTGCGACGATGGCGGAGACATATGACGTGGCGATTGCGCCGCA
CTGTCCCCTCGGTGAGTTCCTCCTGTTCTTTGTGTGTGATCCATGCTAAT
CAAATGCTCAGGTCCAATTGCCCTTGCAGCTTCAATGCAAGTTGCTCTTT
CAACCCCGAACTTCGTCATCCAAGAAATGTCGCTTGGAATGCATTATAAT
GTTGAAGCCGGAGATATTGATCTCACAAGCTACCTGACGAATCCAACGGT
GTTCAACATCGAAGAGGGGTATGTGCCAGCGCCCACAGGAGCGGGGCTGG
GAGTGGAGATTGATGAGGAGTTGGTGAGAAGAATCAGTCGGGAAACGGAG
CCATGGCTACCGAAGGAATTCTATGGCGTCGATGGGGGAATCCGAGAGTG
GTAG
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Coding sequence (CDS) from alignment at MCQH01000271:23565..24868+

>ATCC10864_011310-T1 ID=ATCC10864_011310-T1|Name=ATCC10864_011310-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4608bp|location=Sequence derived from alignment at MCQH01000271:23565..24868+ (Aspergillus niger ATCC 10864)
ATGGCTCCCATCAAGTCCATCGAGTACTTTCGCGTCAAGCCGCGCTGGCT
TTTCGTCAAGGTGACGGATAGCGAAGATAAATTTGGGTGGGGTGAGGCTA
CACTTGAGGGGCATACGCAGGCTGTGGAGGGTGCGTTGGATGAGATTATA
GGGAGGATTGTTGGTTATGAGGCTGATGACATCGAGCACGTCTGGCAGAC
AATTTGGAGACTTAGCTTCTATCGCGGCGGTCCGGTTTTCATGTCCGCCT
TGTCGGGCATTGATATCGCGTTGTGGGACTTGAAAGGTCGGAGGTTGAAC
GTACCCGTCTACCAGCTTCTCGGCGGCAAGGTACGCAACAAGGTTCAAGT
TTATGCTTGGATTGGAGGTGACCGGCCAAGTGATGTTGAAGTAGCTGCCA
AGGCCCGTATCGCGCAGGGCCTCAAGTGCGTTAAGATGAATGCTACAGAG
GATATGAACTGGCTGGACTCGCCATCTGTACTAGACTCTTGCATCGAGCG
CATCAAACAGGTCAAGGCTCTTGGTCTTGATGCTGGCCTTGATTTCCACG
GCCGTCTACATCGCCCCATGGCAAAGCAGCTTGCGAAAGCACTTGAACCT
TACCGTCCTTTGTTTATTGAGGAGCCTTTGCTCGTTGAACACCCCGAAGC
TATCAAGCAGCTTTCTCAACACACGACTATTCCAATCGCATTTGGTGAAC
GTTTATATACTAGATGGGATGTTAAGCGGTTCCTCGAAGATGCGTCGGTC
GATGTGCTGCAGCCGGATATCGCGCATGCTGGTGGAATCTCAGAAACAAA
GCGCATTGCGACGATGGCGGAGACATATGACGTGGCGATTGCGCCGCACT
GTCCCCTCGGTCCAATTGCCCTTGCAGCTTCAATGCAAGTTGCTCTTTCA
ACCCCGAACTTCGTCATCCAAGAAATGTCGCTTGGAATGCATTATAATGT
TGAAGCCGGAGATATTGATCTCACAAGCTACCTGACGAATCCAACGGTGT
TCAACATCGAAGAGGGGTATGTGCCAGCGCCCACAGGAGCGGGGCTGGGA
GTGGAGATTGATGAGGAGTTGGTGAGAAGAATCAGTCGGGAAACGGAGCC
ATGGCTACCGAAGGAATTCTATGGCGTCGATGGGGGAATCCGAGAGTGGT
AGATGGCTCCCATCAAGTCCATCGAGTACTTTCGCGTCAAGCCGCGCTGG
CTTTTCGTCAAGGTGACGGATAGCGAAGATAAATTTGGGTGGGGTGAGGC
TACACTTGAGGGGCATACGCAGGCTGTGGAGGGTGCGTTGGATGAGATTA
TAGGGAGGATTGTTGGTTATGAGGCTGATGACATCGAGCACGTCTGGCAG
ACAATTTGGAGACTTAGCTTCTATCGCGGCGGTCCGGTTTTCATGTCCGC
CTTGTCGGGCATTGATATCGCGTTGTGGGACTTGAAAGGTCGGAGGTTGA
ACGTACCCGTCTACCAGCTTCTCGGCGGCAAGGTACGCAACAAGGTTCAA
GTTTATGCTTGGATTGGAGGTGACCGGCCAAGTGATGTTGAAGTAGCTGC
CAAGGCCCGTATCGCGCAGGGCCTCAAGTGCGTTAAGATGAATGCTACAG
AGGATATGAACTGGCTGGACTCGCCATCTGTACTAGACTCTTGCATCGAG
CGCATCAAACAGGTCAAGGCTCTTGGTCTTGATGCTGGCCTTGATTTCCA
CGGCCGTCTACATCGCCCCATGGCAAAGCAGCTTGCGAAAGCACTTGAAC
CTTACCGTCCTTTGTTTATTGAGGAGCCTTTGCTCGTTGAACACCCCGAA
GCTATCAAGCAGCTTTCTCAACACACGACTATTCCAATCGCATTTGGTGA
ACGTTTATATACTAGATGGGATGTTAAGCGGTTCCTCGAAGATGCGTCGG
TCGATGTGCTGCAGCCGGATATCGCGCATGCTGGTGGAATCTCAGAAACA
AAGCGCATTGCGACGATGGCGGAGACATATGACGTGGCGATTGCGCCGCA
CTGTCCCCTCGGTCCAATTGCCCTTGCAGCTTCAATGCAAGTTGCTCTTT
CAACCCCGAACTTCGTCATCCAAGAAATGTCGCTTGGAATGCATTATAAT
GTTGAAGCCGGAGATATTGATCTCACAAGCTACCTGACGAATCCAACGGT
GTTCAACATCGAAGAGGGGTATGTGCCAGCGCCCACAGGAGCGGGGCTGG
GAGTGGAGATTGATGAGGAGTTGGTGAGAAGAATCAGTCGGGAAACGGAG
CCATGGCTACCGAAGGAATTCTATGGCGTCGATGGGGGAATCCGAGAGTG
GTAGATGGCTCCCATCAAGTCCATCGAGTACTTTCGCGTCAAGCCGCGCT
GGCTTTTCGTCAAGGTGACGGATAGCGAAGATAAATTTGGGTGGGGTGAG
GCTACACTTGAGGGGCATACGCAGGCTGTGGAGGGTGCGTTGGATGAGAT
TATAGGGAGGATTGTTGGTTATGAGGCTGATGACATCGAGCACGTCTGGC
AGACAATTTGGAGACTTAGCTTCTATCGCGGCGGTCCGGTTTTCATGTCC
GCCTTGTCGGGCATTGATATCGCGTTGTGGGACTTGAAAGGTCGGAGGTT
GAACGTACCCGTCTACCAGCTTCTCGGCGGCAAGGTACGCAACAAGGTTC
AAGTTTATGCTTGGATTGGAGGTGACCGGCCAAGTGATGTTGAAGTAGCT
GCCAAGGCCCGTATCGCGCAGGGCCTCAAGTGCGTTAAGATGAATGCTAC
AGAGGATATGAACTGGCTGGACTCGCCATCTGTACTAGACTCTTGCATCG
AGCGCATCAAACAGGTCAAGGCTCTTGGTCTTGATGCTGGCCTTGATTTC
CACGGCCGTCTACATCGCCCCATGGCAAAGCAGCTTGCGAAAGCACTTGA
ACCTTACCGTCCTTTGTTTATTGAGGAGCCTTTGCTCGTTGAACACCCCG
AAGCTATCAAGCAGCTTTCTCAACACACGACTATTCCAATCGCATTTGGT
GAACGTTTATATACTAGATGGGATGTTAAGCGGTTCCTCGAAGATGCGTC
GGTCGATGTGCTGCAGCCGGATATCGCGCATGCTGGTGGAATCTCAGAAA
CAAAGCGCATTGCGACGATGGCGGAGACATATGACGTGGCGATTGCGCCG
CACTGTCCCCTCGGTCCAATTGCCCTTGCAGCTTCAATGCAAGTTGCTCT
TTCAACCCCGAACTTCGTCATCCAAGAAATGTCGCTTGGAATGCATTATA
ATGTTGAAGCCGGAGATATTGATCTCACAAGCTACCTGACGAATCCAACG
GTGTTCAACATCGAAGAGGGGTATGTGCCAGCGCCCACAGGAGCGGGGCT
GGGAGTGGAGATTGATGAGGAGTTGGTGAGAAGAATCAGTCGGGAAACGG
AGCCATGGCTACCGAAGGAATTCTATGGCGTCGATGGGGGAATCCGAGAG
TGGTAGATGGCTCCCATCAAGTCCATCGAGTACTTTCGCGTCAAGCCGCG
CTGGCTTTTCGTCAAGGTGACGGATAGCGAAGATAAATTTGGGTGGGGTG
AGGCTACACTTGAGGGGCATACGCAGGCTGTGGAGGGTGCGTTGGATGAG
ATTATAGGGAGGATTGTTGGTTATGAGGCTGATGACATCGAGCACGTCTG
GCAGACAATTTGGAGACTTAGCTTCTATCGCGGCGGTCCGGTTTTCATGT
CCGCCTTGTCGGGCATTGATATCGCGTTGTGGGACTTGAAAGGTCGGAGG
TTGAACGTACCCGTCTACCAGCTTCTCGGCGGCAAGGTACGCAACAAGGT
TCAAGTTTATGCTTGGATTGGAGGTGACCGGCCAAGTGATGTTGAAGTAG
CTGCCAAGGCCCGTATCGCGCAGGGCCTCAAGTGCGTTAAGATGAATGCT
ACAGAGGATATGAACTGGCTGGACTCGCCATCTGTACTAGACTCTTGCAT
CGAGCGCATCAAACAGGTCAAGGCTCTTGGTCTTGATGCTGGCCTTGATT
TCCACGGCCGTCTACATCGCCCCATGGCAAAGCAGCTTGCGAAAGCACTT
GAACCTTACCGTCCTTTGTTTATTGAGGAGCCTTTGCTCGTTGAACACCC
CGAAGCTATCAAGCAGCTTTCTCAACACACGACTATTCCAATCGCATTTG
GTGAACGTTTATATACTAGATGGGATGTTAAGCGGTTCCTCGAAGATGCG
TCGGTCGATGTGCTGCAGCCGGATATCGCGCATGCTGGTGGAATCTCAGA
AACAAAGCGCATTGCGACGATGGCGGAGACATATGACGTGGCGATTGCGC
CGCACTGTCCCCTCGGTCCAATTGCCCTTGCAGCTTCAATGCAAGTTGCT
CTTTCAACCCCGAACTTCGTCATCCAAGAAATGTCGCTTGGAATGCATTA
TAATGTTGAAGCCGGAGATATTGATCTCACAAGCTACCTGACGAATCCAA
CGGTGTTCAACATCGAAGAGGGGTATGTGCCAGCGCCCACAGGAGCGGGG
CTGGGAGTGGAGATTGATGAGGAGTTGGTGAGAAGAATCAGTCGGGAAAC
GGAGCCATGGCTACCGAAGGAATTCTATGGCGTCGATGGGGGAATCCGAG
AGTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008869galactonate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0034194D-galactonate catabolic process
GO:0009063cellular amino acid catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011310ATCC10864_011310Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011310-T1.exon1ATCC10864_011310-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011310-T1.exon2ATCC10864_011310-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011310-T1.exon3ATCC10864_011310-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011310-T1.exon4ATCC10864_011310-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011310-T1.cdsATCC10864_011310-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011310-T1ATCC10864_011310-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029017
InterProIPR018110
InterProIPR013341
InterProIPR036849
InterProIPR034593
PFAMPF13378
InterProIPR013342
InterProIPR029065
InterProIPR023592
PFAMPF02746
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000271supercontigMCQH01000271:23565..24868 +
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