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ATCC10864_011348-T1, ATCC10864_011348-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011348-T1
Unique NameATCC10864_011348-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:58949..59827+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011348-T1 ID=ATCC10864_011348-T1|Name=ATCC10864_011348-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=879bp|location=Sequence derived from alignment at MCQH01000282:58949..59827+ (Aspergillus niger ATCC 10864)
ATGCGCTTCGCAATCACCGCCGCCTCGCTGAGCCTCGTCTCTTCGGCTTT GGCCATCACCATCACCCAGCCCACCTCAGGCACCGAGTGGGATTTCTCCA CTCCGAAGACTATCAAGTTCACCAGCGATGCGAATGATCCGTCAGTGATC AGCATCATCTTGCGCACTCAGGATGGATCCTTCCAGACCAAGCTGGCGGA CAACGTAAAGACTTCCACGGGGGAATACACTACCCAGCCCAACCCTAGCA TTTCCAACGGGTACGTACCCTAGATCTTAGTGGACTCACCGATAGTTGAA AGGGGGAACGCTACTAACTTTGTGTTTCTGATCCTAGGTCTGACTATGAA ATCGAGATCATCGACTCTTCGGGCGAGCTCGCTGTGAGCCCGACTTTTAC TGTCGAAAAGGGTGCTTCGACCGATGGTACTACTTCCTCCTCATCAGCTT CTTCCACATCCACTACATCTTCTTCCTCTTCCTCTTCTTCTTCCTCCACC ACCACTTCCTCCTCTTCGACATCCAGTGAGACCGAATCCACCACAGTCAC CTCTACGACTGCGGTGTCTTCGACATCTACCTCGTCGAGCAGTCCTCTGT CTTCATCTTCAGGCAAGATGTCATTTCGTCATTGTGGCACGGCGACCTCA CTGACCGAAGCTTGATTTTTCTACAGGATCGGCCACCTCTACCTCCACGT CTTCGTCGTCTTCTACGGGCACTACGCTCGCCACATCTGCGTCTTCTACC TCGAGCTCAAACAGCACTGCCACCACATCCACCGCTCAGCTATCCACCGG CGCGGCTTCGTCTACATTTAATGCTCCCCAGGGAGTCGTGGCTCTGCTTG GTGCTGCTTTGGCGCTTCTCTACGTCTGA
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Coding sequence (CDS) from alignment at MCQH01000282:58949..59827+

>ATCC10864_011348-T1 ID=ATCC10864_011348-T1|Name=ATCC10864_011348-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1656bp|location=Sequence derived from alignment at MCQH01000282:58949..59827+ (Aspergillus niger ATCC 10864)
ATGCGCTTCGCAATCACCGCCGCCTCGCTGAGCCTCGTCTCTTCGGCTTT
GGCCATCACCATCACCCAGCCCACCTCAGGCACCGAGTGGGATTTCTCCA
CTCCGAAGACTATCAAGTTCACCAGCGATGCGAATGATCCGTCAGTGATC
AGCATCATCTTGCGCACTCAGGATGGATCCTTCCAGACCAAGCTGGCGGA
CAACGTAAAGACTTCCACGGGGGAATACACTACCCAGCCCAACCCTAGCA
TTTCCAACGGGTCTGACTATGAAATCGAGATCATCGACTCTTCGGGCGAG
CTCGCTGTGAGCCCGACTTTTACTGTCGAAAAGGGTGCTTCGACCGATGG
ATCGGCCACCTCTACCTCCACGTCTTCGTCGTCTTCTACGGGCACTACGC
TCGCCACATCTGCGTCTTCTACCTCGAGCTCAAACAGCACTGCCACCACA
TCCACCGCTCAGCTATCCACCGGCGCGGCTTCGTCTACATTTAATGCTCC
CCAGGGAGTCGTGGCTCTGCTTGGTGCTGCTTTGGCGCTTCTCTACGTCT
GAATGCGCTTCGCAATCACCGCCGCCTCGCTGAGCCTCGTCTCTTCGGCT
TTGGCCATCACCATCACCCAGCCCACCTCAGGCACCGAGTGGGATTTCTC
CACTCCGAAGACTATCAAGTTCACCAGCGATGCGAATGATCCGTCAGTGA
TCAGCATCATCTTGCGCACTCAGGATGGATCCTTCCAGACCAAGCTGGCG
GACAACGTAAAGACTTCCACGGGGGAATACACTACCCAGCCCAACCCTAG
CATTTCCAACGGGTCTGACTATGAAATCGAGATCATCGACTCTTCGGGCG
AGCTCGCTGTGAGCCCGACTTTTACTGTCGAAAAGGGTGCTTCGACCGAT
GGATCGGCCACCTCTACCTCCACGTCTTCGTCGTCTTCTACGGGCACTAC
GCTCGCCACATCTGCGTCTTCTACCTCGAGCTCAAACAGCACTGCCACCA
CATCCACCGCTCAGCTATCCACCGGCGCGGCTTCGTCTACATTTAATGCT
CCCCAGGGAGTCGTGGCTCTGCTTGGTGCTGCTTTGGCGCTTCTCTACGT
CTGAATGCGCTTCGCAATCACCGCCGCCTCGCTGAGCCTCGTCTCTTCGG
CTTTGGCCATCACCATCACCCAGCCCACCTCAGGCACCGAGTGGGATTTC
TCCACTCCGAAGACTATCAAGTTCACCAGCGATGCGAATGATCCGTCAGT
GATCAGCATCATCTTGCGCACTCAGGATGGATCCTTCCAGACCAAGCTGG
CGGACAACGTAAAGACTTCCACGGGGGAATACACTACCCAGCCCAACCCT
AGCATTTCCAACGGGTCTGACTATGAAATCGAGATCATCGACTCTTCGGG
CGAGCTCGCTGTGAGCCCGACTTTTACTGTCGAAAAGGGTGCTTCGACCG
ATGGATCGGCCACCTCTACCTCCACGTCTTCGTCGTCTTCTACGGGCACT
ACGCTCGCCACATCTGCGTCTTCTACCTCGAGCTCAAACAGCACTGCCAC
CACATCCACCGCTCAGCTATCCACCGGCGCGGCTTCGTCTACATTTAATG
CTCCCCAGGGAGTCGTGGCTCTGCTTGGTGCTGCTTTGGCGCTTCTCTAC
GTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011348ATCC10864_011348Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011348-T1.exon1ATCC10864_011348-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011348-T1.exon2ATCC10864_011348-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011348-T1.exon3ATCC10864_011348-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011348-T1.cdsATCC10864_011348-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011348-T1ATCC10864_011348-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF10342
InterProIPR018466
Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:58949..59827 +