You are here

Home

ATCC10864_011536-T1, ATCC10864_011536-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011536-T1
Unique NameATCC10864_011536-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000288:65009..66688-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011536-T1 ID=ATCC10864_011536-T1|Name=ATCC10864_011536-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1680bp|location=Sequence derived from alignment at MCQH01000288:65009..66688- (Aspergillus niger ATCC 10864)
ATGGTTCACATTCAAGACCTCCCTCGGGAGCTGCTTCTGCATATTTTCTC
CTCTGTTGCCCACAGCGATCCTTCCAACCCACTGGATCAGAACACCAAGT
CTTCCGATGAAAACGTCAAGACTCAAACCCAACAACCTCCTGCCGATAGA
CTGTTCCCACGCCCTCCTTGGGTCGCTGAGGATAAAGATGATGAGACCGA
TGAGGAGAATCCCGAGGATGATTGGGAGGGAGGGAGCACACAGATCCAGG
ACGTGATCGACGTGTACAATCTGTGTCGGGTGTGCCGCTTATTCCGCGAC
CTCGCCCAGCCCCTGCTGTTCGAGCATGTTGATCTGTCTGGCTTCCCTGG
TGACATGCGGAACCTCGTTCTTCTTACCCGCACCGTCCTTTGCCGTCCCA
GCCTAGGCGAACATATCCGCAGCCTCTCCGTCCTTCCAGACCACGATCAT
CACGTCTTTGGTAAAAGCCCAAAGCCCCTGACCGCCGACGACCGAAAGCT
CTTTAGCTCCTCCATACGCGATATCGGCTTAGCCAAGGAGGACGAGCGCG
ACTGGATGAGTGCTTTGAAGAAGGAGGAACTCGACTACAGTCTTATGGTC
CTCTTGCTCATCTTGAAAGCTCCAAATCTCCGCTTGTTGACAGTGGCGGG
AGGTTACTTTGCCATGAAGCCACTCGAACAACTCTGGAAGCGCCATCCCG
CCGTATTGTCAAAACTCGAGGACCTGTGGTTTGAGGGTGACGATCTCCTC
AAGGGCTATCCGCTTACTATTTACGAGGAGATGATCAGTCGGCCTCAGCT
ACGCTCGTTAAATATTGAAGAAGCCCACCTCAGTGACGACCTATTTCCCG
CCTGTTGGACTCCACAATCGTTAACCACGAGCCGGATCAGCCTACGCCTC
TGCCACATCGATGCCCCCTCTGTCACCAAGTTACTTCGCGCATGCCGCAC
AGTGACTCACTTCATCTACGACAACTTTACCATCGACCCTGAGGACCAGC
CTCATAACCTCCGCCCCGTTCGCGAAGCCACCGCTCCCGAGTTATGCGCC
GCGCTCCTCCCCCACAAGGACACCCTAGAATGCCTGACAGTGACCTTCAA
CCGCGAACCCCAGGAACGAGAGAACATCGATGATTACGTGGCCCGCCAGG
CGAAGATCGGCCCGCTGCGCGACTTCTCCGTGCTCCGGCGACTCACCGTT
CAGCAAGCGTTCCTGCCGCTGCAGCCCCAGTTCCCTCCCACCCTCGAACA
GCTCACTGTCGACGACTGCAACGTCTCCGTCCGTGGGTTGGCCGAGCATC
TGGCTAAGGAACATCGACAGGGACGCCTTCCCGCACTCAAGCGCGTCGAA
ATGCTCGCCGTGGATATTACCGACCCCATCAAACTTCCGGGTCAGCAGAT
CCCATTTGGCCAGACGCCGGAGCAGTCTTACACAAGCATTAAGGATCTGT
TCAAGGACACGTCCGTCGATTTCACCATCACTCCTTATCCGGATTGTCCG
CAGAACCTCGCGGGCGACTCCGACCTCGACGACTACTCTGATGATGACCC
TTACGATATGACAGATGAATATGGCTTACTGGGTCTCCGCGAAGGGGGTA
ACAGCCTCTTCCAGGCGATGCTCATGCAAGCGATGCGGGCACAGGAGGAC
CATTACATGGATGATGAGTTCGACGAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000288:65009..66688-

>ATCC10864_011536-T1 ID=ATCC10864_011536-T1|Name=ATCC10864_011536-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1680bp|location=Sequence derived from alignment at MCQH01000288:65009..66688- (Aspergillus niger ATCC 10864)
ATGGTTCACATTCAAGACCTCCCTCGGGAGCTGCTTCTGCATATTTTCTC
CTCTGTTGCCCACAGCGATCCTTCCAACCCACTGGATCAGAACACCAAGT
CTTCCGATGAAAACGTCAAGACTCAAACCCAACAACCTCCTGCCGATAGA
CTGTTCCCACGCCCTCCTTGGGTCGCTGAGGATAAAGATGATGAGACCGA
TGAGGAGAATCCCGAGGATGATTGGGAGGGAGGGAGCACACAGATCCAGG
ACGTGATCGACGTGTACAATCTGTGTCGGGTGTGCCGCTTATTCCGCGAC
CTCGCCCAGCCCCTGCTGTTCGAGCATGTTGATCTGTCTGGCTTCCCTGG
TGACATGCGGAACCTCGTTCTTCTTACCCGCACCGTCCTTTGCCGTCCCA
GCCTAGGCGAACATATCCGCAGCCTCTCCGTCCTTCCAGACCACGATCAT
CACGTCTTTGGTAAAAGCCCAAAGCCCCTGACCGCCGACGACCGAAAGCT
CTTTAGCTCCTCCATACGCGATATCGGCTTAGCCAAGGAGGACGAGCGCG
ACTGGATGAGTGCTTTGAAGAAGGAGGAACTCGACTACAGTCTTATGGTC
CTCTTGCTCATCTTGAAAGCTCCAAATCTCCGCTTGTTGACAGTGGCGGG
AGGTTACTTTGCCATGAAGCCACTCGAACAACTCTGGAAGCGCCATCCCG
CCGTATTGTCAAAACTCGAGGACCTGTGGTTTGAGGGTGACGATCTCCTC
AAGGGCTATCCGCTTACTATTTACGAGGAGATGATCAGTCGGCCTCAGCT
ACGCTCGTTAAATATTGAAGAAGCCCACCTCAGTGACGACCTATTTCCCG
CCTGTTGGACTCCACAATCGTTAACCACGAGCCGGATCAGCCTACGCCTC
TGCCACATCGATGCCCCCTCTGTCACCAAGTTACTTCGCGCATGCCGCAC
AGTGACTCACTTCATCTACGACAACTTTACCATCGACCCTGAGGACCAGC
CTCATAACCTCCGCCCCGTTCGCGAAGCCACCGCTCCCGAGTTATGCGCC
GCGCTCCTCCCCCACAAGGACACCCTAGAATGCCTGACAGTGACCTTCAA
CCGCGAACCCCAGGAACGAGAGAACATCGATGATTACGTGGCCCGCCAGG
CGAAGATCGGCCCGCTGCGCGACTTCTCCGTGCTCCGGCGACTCACCGTT
CAGCAAGCGTTCCTGCCGCTGCAGCCCCAGTTCCCTCCCACCCTCGAACA
GCTCACTGTCGACGACTGCAACGTCTCCGTCCGTGGGTTGGCCGAGCATC
TGGCTAAGGAACATCGACAGGGACGCCTTCCCGCACTCAAGCGCGTCGAA
ATGCTCGCCGTGGATATTACCGACCCCATCAAACTTCCGGGTCAGCAGAT
CCCATTTGGCCAGACGCCGGAGCAGTCTTACACAAGCATTAAGGATCTGT
TCAAGGACACGTCCGTCGATTTCACCATCACTCCTTATCCGGATTGTCCG
CAGAACCTCGCGGGCGACTCCGACCTCGACGACTACTCTGATGATGACCC
TTACGATATGACAGATGAATATGGCTTACTGGGTCTCCGCGAAGGGGGTA
ACAGCCTCTTCCAGGCGATGCTCATGCAAGCGATGCGGGCACAGGAGGAC
CATTACATGGATGATGAGTTCGACGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011536ATCC10864_011536Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011536-T1.cdsATCC10864_011536-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011536-T1.exon1ATCC10864_011536-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011536-T1ATCC10864_011536-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12937
InterProIPR001810
InterProIPR032675
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000288supercontigMCQH01000288:65009..66688 -
Powered by Drupal