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ATCC10864_011565-T1, ATCC10864_011565-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011565-T1
Unique NameATCC10864_011565-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000288:132705..133932+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011565-T1 ID=ATCC10864_011565-T1|Name=ATCC10864_011565-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1228bp|location=Sequence derived from alignment at MCQH01000288:132705..133932+ (Aspergillus niger ATCC 10864)
ATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCACAGCCCCAGCAGCC
AATTCTACAATGCCAGAAGGTCTCGGACATCATTCGTAGTTTCCGTCCTA
CCAAGGTTAGTTCAATGGCCCTTATGGACCGGGCCAGCCATCTAATCGTC
TGTTTCTCCAACCATAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAAT
TATGTGACGTCGCTGGACTTTGATGACCAAGGAGATTACTTGGTGGCATC
GGGTGATGATGAGACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCTA
CAAAGTCGGTTCCGAGCAAAAAGTACGGCGCCCATCTAGCCAGGTTCACC
CACCACAGTCGTCAGGTCCTCCATGCGAGCACCAAGGTTGACGGTATGTC
TGCTCCACCGCGCCTCCATCCTTCCCCTCTGTTCTGACCGGCCTAGATTC
ATTGCGCTTGTTGGACCTTCACAACGAAGGCTACATTCGCTACTTCCAGG
GTCACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTGGCAGTGACTCC
TTCATCTCATGCTCCAAAGACGATACCGTTGCACTCTGGGATCTCGGCTC
TAGAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATACCTCGTGGCCT
TCGACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGTCAACCGCGTCA
GTCCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCGTTCTCCAGTTT
CGACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTACACGAGGCAGGG
GGTGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACTTGCTTGTCGGG
ACAGACTACCATGGGCATTTCATTCTCGATGCCTTCGAGGGCACCGTTAA
GGCGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGCTGCACCGGTAT
CAACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCTTCTCACCCGAC
GGGCGATACGTGGTTGGTGGTTCGGGAGATCATTCCGACATGCTAGTGTG
GGATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATTGCAGCCAATGA
CTAGACTATCACATCGAGGACGGACTGCCATCGTTGAATACAATCCGAGG
TACAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTCTGGCTTCCAGA
GGACCCTTCCAGATCTTCTGAAAAGTAG
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Coding sequence (CDS) from alignment at MCQH01000288:132705..133932+

>ATCC10864_011565-T1 ID=ATCC10864_011565-T1|Name=ATCC10864_011565-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3339bp|location=Sequence derived from alignment at MCQH01000288:132705..133932+ (Aspergillus niger ATCC 10864)
ATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCACAGCCCCAGCAGCC
AATTCTACAATGCCAGAAGGTCTCGGACATCATTCGTAGTTTCCGTCCTA
CCAAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAATTATGTGACGTCG
CTGGACTTTGATGACCAAGGAGATTACTTGGTGGCATCGGGTGATGATGA
GACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCTACAAAGTCGGTTC
CGAGCAAAAAGTACGGCGCCCATCTAGCCAGGTTCACCCACCACAGTCGT
CAGGTCCTCCATGCGAGCACCAAGGTTGACGATTCATTGCGCTTGTTGGA
CCTTCACAACGAAGGCTACATTCGCTACTTCCAGGGTCACACCGACAAAG
TCACCTGTTTAGCTCTATCTCCTGGCAGTGACTCCTTCATCTCATGCTCC
AAAGACGATACCGTTGCACTCTGGGATCTCGGCTCTAGAAACGCGCAAGG
GAAATTGAAACTTGCGACTCCATACCTCGTGGCCTTCGACCCTTCTGCTT
CTGTCATTGCCATTGCATCCCAGTCAACCGCGTCAGTCCTTCTTTACGAC
CTCCGCAACTACGACAAAGCTCCGTTCTCCAGTTTCGACCTTGCGCCGTA
CGAGGAACGGTATACGCCTTCTACACGAGGCAGGGGGTGGACTCGCCTGG
AATTCTCCAATGATGGCAAGCACTTGCTTGTCGGGACAGACTACCATGGG
CATTTCATTCTCGATGCCTTCGAGGGCACCGTTAAGGCGTTCTTGGTGGG
CAAGGCCGGATCACCCGGAAGGGCTGCACCGGTATCAACAACCGGGAAGC
CTCTCGGTCAGGGAGATGCGTGCTTCTCACCCGACGGGCGATACGTGGTT
GGTGGTTCGGGAGATCATTCCGACATGCTAGTGTGGGATCTACAACAATC
TCCTCCAGAGCCAAACGGTCTATTGCAGCCAATGACTAGACTATCACATC
GAGGACGGACTGCCATCGTTGAATACAATCCGAGGTACAACATGATTGCG
TCTGCCGACAAAGAGACAGTTTTCTGGCTTCCAGAGGACCCTTCCAGATC
TTCTGAAAAGTAGATGGCTGAAGGTCAACCGCAACCGACGGCGCAACCAC
AGCCCCAGCAGCCAATTCTACAATGCCAGAAGGTCTCGGACATCATTCGT
AGTTTCCGTCCTACCAAGGCATTCCGAGGCCCAAAGCAGGATACCTCTAA
TTATGTGACGTCGCTGGACTTTGATGACCAAGGAGATTACTTGGTGGCAT
CGGGTGATGATGAGACTATCCAGGTTTTCGATATCAAGGAGGGCAAGTCT
ACAAAGTCGGTTCCGAGCAAAAAGTACGGCGCCCATCTAGCCAGGTTCAC
CCACCACAGTCGTCAGGTCCTCCATGCGAGCACCAAGGTTGACGATTCAT
TGCGCTTGTTGGACCTTCACAACGAAGGCTACATTCGCTACTTCCAGGGT
CACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTGGCAGTGACTCCTT
CATCTCATGCTCCAAAGACGATACCGTTGCACTCTGGGATCTCGGCTCTA
GAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATACCTCGTGGCCTTC
GACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGTCAACCGCGTCAGT
CCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCGTTCTCCAGTTTCG
ACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTACACGAGGCAGGGGG
TGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACTTGCTTGTCGGGAC
AGACTACCATGGGCATTTCATTCTCGATGCCTTCGAGGGCACCGTTAAGG
CGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGCTGCACCGGTATCA
ACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCTTCTCACCCGACGG
GCGATACGTGGTTGGTGGTTCGGGAGATCATTCCGACATGCTAGTGTGGG
ATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATTGCAGCCAATGACT
AGACTATCACATCGAGGACGGACTGCCATCGTTGAATACAATCCGAGGTA
CAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTCTGGCTTCCAGAGG
ACCCTTCCAGATCTTCTGAAAAGTAGATGGCTGAAGGTCAACCGCAACCG
ACGGCGCAACCACAGCCCCAGCAGCCAATTCTACAATGCCAGAAGGTCTC
GGACATCATTCGTAGTTTCCGTCCTACCAAGGCATTCCGAGGCCCAAAGC
AGGATACCTCTAATTATGTGACGTCGCTGGACTTTGATGACCAAGGAGAT
TACTTGGTGGCATCGGGTGATGATGAGACTATCCAGGTTTTCGATATCAA
GGAGGGCAAGTCTACAAAGTCGGTTCCGAGCAAAAAGTACGGCGCCCATC
TAGCCAGGTTCACCCACCACAGTCGTCAGGTCCTCCATGCGAGCACCAAG
GTTGACGATTCATTGCGCTTGTTGGACCTTCACAACGAAGGCTACATTCG
CTACTTCCAGGGTCACACCGACAAAGTCACCTGTTTAGCTCTATCTCCTG
GCAGTGACTCCTTCATCTCATGCTCCAAAGACGATACCGTTGCACTCTGG
GATCTCGGCTCTAGAAACGCGCAAGGGAAATTGAAACTTGCGACTCCATA
CCTCGTGGCCTTCGACCCTTCTGCTTCTGTCATTGCCATTGCATCCCAGT
CAACCGCGTCAGTCCTTCTTTACGACCTCCGCAACTACGACAAAGCTCCG
TTCTCCAGTTTCGACCTTGCGCCGTACGAGGAACGGTATACGCCTTCTAC
ACGAGGCAGGGGGTGGACTCGCCTGGAATTCTCCAATGATGGCAAGCACT
TGCTTGTCGGGACAGACTACCATGGGCATTTCATTCTCGATGCCTTCGAG
GGCACCGTTAAGGCGTTCTTGGTGGGCAAGGCCGGATCACCCGGAAGGGC
TGCACCGGTATCAACAACCGGGAAGCCTCTCGGTCAGGGAGATGCGTGCT
TCTCACCCGACGGGCGATACGTGGTTGGTGGTTCGGGAGATCATTCCGAC
ATGCTAGTGTGGGATCTACAACAATCTCCTCCAGAGCCAAACGGTCTATT
GCAGCCAATGACTAGACTATCACATCGAGGACGGACTGCCATCGTTGAAT
ACAATCCGAGGTACAACATGATTGCGTCTGCCGACAAAGAGACAGTTTTC
TGGCTTCCAGAGGACCCTTCCAGATCTTCTGAAAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048188Set1C/COMPASS complex
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011565ATCC10864_011565Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011565-T1.exon1ATCC10864_011565-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011565-T1.exon2ATCC10864_011565-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011565-T1.exon3ATCC10864_011565-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011565-T1.cdsATCC10864_011565-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011565-T1ATCC10864_011565-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR001680
InterProIPR036322
InterProIPR037867
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000288supercontigMCQH01000288:132705..133932 +
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