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ATCC10864_011610-T1, ATCC10864_011610-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011610-T1
Unique NameATCC10864_011610-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000289:92800..93925+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011610-T1 ID=ATCC10864_011610-T1|Name=ATCC10864_011610-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1126bp|location=Sequence derived from alignment at MCQH01000289:92800..93925+ (Aspergillus niger ATCC 10864)
ATGTCCGCCATCGAGCCAGTCGTGCGTACCGCCCCATCCCGAAACTATCA
TCCACATACAATCTCCTTGAAATTGAATACACATGTGTCAAATGAGGGCG
TCACGGTCCTGGAGTCGGAAATTCATATACCAAAGTACATTTGTCGCTGA
CTTGAATTGTTGGGTTTTCGCAGGTCGTCATTGACGGCAAGGGACACCTC
TTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAA
GATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCC
GTGCGAAGCGTATGTTCTATCCGACCCGGTTTCTTTCGATTTCATTTTGC
AATATGGATTTTCTTTGGGATGAATGGGAGTGCGACGGTTTTCGACATAT
GGAGGAGGACATCGGCAATTGATTGGAATATTTATGGAGGAACAAGCAAC
ACATGTGTGCTGGTGGACAACGGGCTGACCTGGATTTCGCGATATAGTCA
AGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGA
GGTGAGACTACCCGATGACTTTCCCCCTTCGATGGGGAAAGACGACACTT
ATCTCTTTTGCGGGACTCCGTGCTGAATCGCTACAGGTCCCTTCCACTTC
CGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCA
CAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGG
GTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCT
CTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCG
TCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGGTACG
TTTATGCTGAAGTGGAGAGGATAAAATGGGAGATGTTGGAATATTGGGTG
CAGAAGGCTAACGGATTCGTTTTTTCTACTCGTACAGACTTGAGGAGCGC
AGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCG
CCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGA
GCCAGCTCGCTCAGTACGGATACTAG
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Coding sequence (CDS) from alignment at MCQH01000289:92800..93925+

>ATCC10864_011610-T1 ID=ATCC10864_011610-T1|Name=ATCC10864_011610-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3045bp|location=Sequence derived from alignment at MCQH01000289:92800..93925+ (Aspergillus niger ATCC 10864)
ATGTCCGCCATCGAGCCAGTCGTCGTCATTGACGGCAAGGGACACCTCTT
GGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGA
TCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGT
GCGAAGCTCAAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCC
CACCCGCGGAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACA
AGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCT
ATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAA
GAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCG
GCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAG
TACCAGGACGTTGTTGCCAGACTTGAGGAGCGCAGAAAGGTTAAGAGCAG
TGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCC
AGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTAC
GGATACTAGATGTCCGCCATCGAGCCAGTCGTCGTCATTGACGGCAAGGG
ACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACG
GTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAG
TTCTTCCGTGCGAAGCTCAAGTACCACGCCTACCTTCGCAAGATGACTCG
TTTCAACCCCACCCGCGGAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCA
TCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGT
GCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTA
CGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCC
TGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTT
GGCTGGAAGTACCAGGACGTTGTTGCCAGACTTGAGGAGCGCAGAAAGGT
TAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCG
TCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTC
GCTCAGTACGGATACTAGATGTCCGCCATCGAGCCAGTCGTCGTCATTGA
CGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGC
TGCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATC
TCCGGCGAGTTCTTCCGTGCGAAGCTCAAGTACCACGCCTACCTTCGCAA
GATGACTCGTTTCAACCCCACCCGCGGAGGTCCCTTCCACTTCCGTGCCC
CCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACC
GCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCC
TCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTG
TTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGC
CACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGACTTGAGGAGCG
CAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCC
GCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAG
AGCCAGCTCGCTCAGTACGGATACTAGATGTCCGCCATCGAGCCAGTCGT
CGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTG
CTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCC
CTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCTCAAGTACCACGCCTA
CCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTCCCTTCCACT
TCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCC
CACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGA
GGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGG
CTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGT
CGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGACT
TGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGG
CCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAG
CAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGATGTCCGCCATCGA
GCCAGTCGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCA
GCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGA
TGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCTCAAGTA
CCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTC
CCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGC
ATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAA
GGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCG
TTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGC
ACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGT
TGCCAGACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGC
GCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGT
GTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP46ATCC10864_011610Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011610-T1ATCC10864_011610-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011610-T1.exon1ATCC10864_011610-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011610-T1.exon2ATCC10864_011610-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011610-T1.exon3ATCC10864_011610-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011610-T1.exon4ATCC10864_011610-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011610-T1.exon5ATCC10864_011610-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011610-T1.cdsATCC10864_011610-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00572
InterProIPR023563
InterProIPR005755
InterProIPR036899
InterProIPR005822
Properties
Property NameValue
Product60S ribosomal protein L16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000289supercontigMCQH01000289:92800..93925 +
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