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ATCC10864_011701-T1, ATCC10864_011701-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011701-T1
Unique NameATCC10864_011701-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:194398..195443+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011701-T1 ID=ATCC10864_011701-T1|Name=ATCC10864_011701-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1046bp|location=Sequence derived from alignment at MCQH01000306:194398..195443+ (Aspergillus niger ATCC 10864)
ATGCCTGCTCCGTTGATTTTCATAACTGGCGCTACTGGCTTTATTGGCAG
TGCTACCGCTGTTGAAGCCCTCAAGTCCGGATATCGACTTCGAATTGGCG
TTCGCAAGAAGTCAGAGAAACTTGAATCATTGTTGGCAGACTATCGCGAC
CGAGTGGAATTCGTCATCATCCCAGATCTCACCGAGGAGGCTGCCTTCCG
AGGAAAGCTGGATGGAGTGGACTATGTCCTCCATCTTGCATCGCCGCTTG
CCAACGGCACAGACAAAGAAGCTTTCTTCCCCCCAGCGGTGAAAGGGACC
TTGGCTGTACTCAAAGAAGCAACCAAGGTGCCAAGCATCAAGAAGATTGT
GATCACTTCGTCTATCGCTGCCCTGATTCCTATCACCGGCATACCTGAAG
GCGGTGTCATAAAAGGTAGCGTGGATGCTTGATACGTCAAAGAGACTCAA
GATGCTGATCTCGGATTTTAGAGGACAATGATTGGGATTTCGGTGTCGAC
CCAGAGGCTGATTTCGTGGATCCTAGCAATCCCGGTGCAACACCCATGAC
TCTCTACCGTGCATCCAAATTGCTTGCAAATAATGCTACGTGGGACTTTT
GGAAGAAAGAGAACCCCCATTACTCACTGGTGACTCTTCATCCGGCATTT
GTCTTTGGGCACAATCTCATGCAAGCTGCTGCCAATGAAACTTTAGGATC
CAATGGAATTATCTGGGGTAGTGTGATGGGAGGCGTCCCACTTGGAGGCA
TCACGGGTGTGCATATTCAAGATGTTGCTGAGGCACATATCAAGTCGTTG
GATCCGAAGATTCAAAACGGTTCGAAATATCTGATCTCGGGGCCGCAAAC
GACATGGAAAGAGGTGGCCCGTATTGCACACAAGTTCTACCCCAATGTTG
GTGTGAAGCTTACAGAGAGCGCTGAGGGTGGTTCTATGCCTACTGATACC
ACCAAAGCCGAAGCTGAACTAGGAATGCAATGGCGGCCGTGGGAGGAGAT
GGTGCGGGGTGTAATGGACCAACAATTGGGCTTCCTTTCGGGTTGA
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Coding sequence (CDS) from alignment at MCQH01000306:194398..195443+

>ATCC10864_011701-T1 ID=ATCC10864_011701-T1|Name=ATCC10864_011701-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1980bp|location=Sequence derived from alignment at MCQH01000306:194398..195443+ (Aspergillus niger ATCC 10864)
ATGCCTGCTCCGTTGATTTTCATAACTGGCGCTACTGGCTTTATTGGCAG
TGCTACCGCTGTTGAAGCCCTCAAGTCCGGATATCGACTTCGAATTGGCG
TTCGCAAGAAGTCAGAGAAACTTGAATCATTGTTGGCAGACTATCGCGAC
CGAGTGGAATTCGTCATCATCCCAGATCTCACCGAGGAGGCTGCCTTCCG
AGGAAAGCTGGATGGAGTGGACTATGTCCTCCATCTTGCATCGCCGCTTG
CCAACGGCACAGACAAAGAAGCTTTCTTCCCCCCAGCGGTGAAAGGGACC
TTGGCTGTACTCAAAGAAGCAACCAAGGTGCCAAGCATCAAGAAGATTGT
GATCACTTCGTCTATCGCTGCCCTGATTCCTATCACCGGCATACCTGAAG
GCGGTGTCATAAAAGAGGACAATGATTGGGATTTCGGTGTCGACCCAGAG
GCTGATTTCGTGGATCCTAGCAATCCCGGTGCAACACCCATGACTCTCTA
CCGTGCATCCAAATTGCTTGCAAATAATGCTACGTGGGACTTTTGGAAGA
AAGAGAACCCCCATTACTCACTGGTGACTCTTCATCCGGCATTTGTCTTT
GGGCACAATCTCATGCAAGCTGCTGCCAATGAAACTTTAGGATCCAATGG
AATTATCTGGGGTAGTGTGATGGGAGGCGTCCCACTTGGAGGCATCACGG
GTGTGCATATTCAAGATGTTGCTGAGGCACATATCAAGTCGTTGGATCCG
AAGATTCAAAACGGTTCGAAATATCTGATCTCGGGGCCGCAAACGACATG
GAAAGAGGTGGCCCGTATTGCACACAAGTTCTACCCCAATGTTGGTGTGA
AGCTTACAGAGAGCGCTGAGGGTGGTTCTATGCCTACTGATACCACCAAA
GCCGAAGCTGAACTAGGAATGCAATGGCGGCCGTGGGAGGAGATGGTGCG
GGGTGTAATGGACCAACAATTGGGCTTCCTTTCGGGTTGAATGCCTGCTC
CGTTGATTTTCATAACTGGCGCTACTGGCTTTATTGGCAGTGCTACCGCT
GTTGAAGCCCTCAAGTCCGGATATCGACTTCGAATTGGCGTTCGCAAGAA
GTCAGAGAAACTTGAATCATTGTTGGCAGACTATCGCGACCGAGTGGAAT
TCGTCATCATCCCAGATCTCACCGAGGAGGCTGCCTTCCGAGGAAAGCTG
GATGGAGTGGACTATGTCCTCCATCTTGCATCGCCGCTTGCCAACGGCAC
AGACAAAGAAGCTTTCTTCCCCCCAGCGGTGAAAGGGACCTTGGCTGTAC
TCAAAGAAGCAACCAAGGTGCCAAGCATCAAGAAGATTGTGATCACTTCG
TCTATCGCTGCCCTGATTCCTATCACCGGCATACCTGAAGGCGGTGTCAT
AAAAGAGGACAATGATTGGGATTTCGGTGTCGACCCAGAGGCTGATTTCG
TGGATCCTAGCAATCCCGGTGCAACACCCATGACTCTCTACCGTGCATCC
AAATTGCTTGCAAATAATGCTACGTGGGACTTTTGGAAGAAAGAGAACCC
CCATTACTCACTGGTGACTCTTCATCCGGCATTTGTCTTTGGGCACAATC
TCATGCAAGCTGCTGCCAATGAAACTTTAGGATCCAATGGAATTATCTGG
GGTAGTGTGATGGGAGGCGTCCCACTTGGAGGCATCACGGGTGTGCATAT
TCAAGATGTTGCTGAGGCACATATCAAGTCGTTGGATCCGAAGATTCAAA
ACGGTTCGAAATATCTGATCTCGGGGCCGCAAACGACATGGAAAGAGGTG
GCCCGTATTGCACACAAGTTCTACCCCAATGTTGGTGTGAAGCTTACAGA
GAGCGCTGAGGGTGGTTCTATGCCTACTGATACCACCAAAGCCGAAGCTG
AACTAGGAATGCAATGGCGGCCGTGGGAGGAGATGGTGCGGGGTGTAATG
GACCAACAATTGGGCTTCCTTTCGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011701ATCC10864_011701Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011701-T1.exon1ATCC10864_011701-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011701-T1.exon2ATCC10864_011701-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011701-T1.cdsATCC10864_011701-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011701-T1ATCC10864_011701-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036291
PFAMPF01370
InterProIPR001509
PFAMPF13460
Properties
Property NameValue
NoteantiSMASH:Cluster_1000306.2
NoteSMCOG1010:NAD-dependent epimerase/dehydratase
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:194398..195443 +
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