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ATCC10864_011712-T1, ATCC10864_011712-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011712-T1
Unique NameATCC10864_011712-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:221005..221387+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011712-T1 ID=ATCC10864_011712-T1|Name=ATCC10864_011712-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=383bp|location=Sequence derived from alignment at MCQH01000306:221005..221387+ (Aspergillus niger ATCC 10864)
ATGTCGCTTCACTCTTATATTAACAGTAAGTTTGGTCTCAAGAGATCCAT
TTCATGTCTGGGATTTAGTCTCATGGTCAGTGCTAACGTATGTGGTTTTA
CCCCGATATAGAGAAAGTATGCATCCTGACGGTTGACGGACGGACACTCC
TGGGGACATTACTCTCGACCGACCAGCTCACGAACCTGGTTCTCCTGGAC
ACGATCGAGCGAATCATCCGGACCCCCGACGACCCGGAACCCAGTTCCCA
GATTGAACATGGGCTGTATCTGATCCGAGGCGACAACGTTGTATTATGCG
GAGAGGTGGACGAAGCCATTGACAACGACATCGACTGGACGAAGGTCAGG
GGAGAAGTGGTCAAAGGTACCAAGAACGCATGA
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Coding sequence (CDS) from alignment at MCQH01000306:221005..221387+

>ATCC10864_011712-T1 ID=ATCC10864_011712-T1|Name=ATCC10864_011712-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=594bp|location=Sequence derived from alignment at MCQH01000306:221005..221387+ (Aspergillus niger ATCC 10864)
ATGTCGCTTCACTCTTATATTAACAAGAAAGTATGCATCCTGACGGTTGA
CGGACGGACACTCCTGGGGACATTACTCTCGACCGACCAGCTCACGAACC
TGGTTCTCCTGGACACGATCGAGCGAATCATCCGGACCCCCGACGACCCG
GAACCCAGTTCCCAGATTGAACATGGGCTGTATCTGATCCGAGGCGACAA
CGTTGTATTATGCGGAGAGGTGGACGAAGCCATTGACAACGACATCGACT
GGACGAAGGTCAGGGGAGAAGTGGTCAAAGGTACCAAGAACGCATGAATG
TCGCTTCACTCTTATATTAACAAGAAAGTATGCATCCTGACGGTTGACGG
ACGGACACTCCTGGGGACATTACTCTCGACCGACCAGCTCACGAACCTGG
TTCTCCTGGACACGATCGAGCGAATCATCCGGACCCCCGACGACCCGGAA
CCCAGTTCCCAGATTGAACATGGGCTGTATCTGATCCGAGGCGACAACGT
TGTATTATGCGGAGAGGTGGACGAAGCCATTGACAACGACATCGACTGGA
CGAAGGTCAGGGGAGAAGTGGTCAAAGGTACCAAGAACGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005688U6 snRNP
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011712ATCC10864_011712Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011712-T1.exon1ATCC10864_011712-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011712-T1.exon2ATCC10864_011712-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011712-T1.cdsATCC10864_011712-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011712-T1ATCC10864_011712-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR010920
InterProIPR001163
InterProIPR034103
InterProIPR044642
PFAMPF01423
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:221005..221387 +
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