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ATCC10864_011730-T1, ATCC10864_011730-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011730-T1
Unique NameATCC10864_011730-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:277377..278427-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011730-T1 ID=ATCC10864_011730-T1|Name=ATCC10864_011730-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1051bp|location=Sequence derived from alignment at MCQH01000306:277377..278427- (Aspergillus niger ATCC 10864)
ATGCCTCCCCGGCTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGC
CACCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCC
ACCAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAG
GGCGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAA
GGGTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGG
TCCCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGT
GAGAGGGGGTTTAATAATGTGTATGTTTTCCCCCTTCCCCTCCGCCCTTG
TCATCTTTGACACGGAGAGAAAGATGATCTTGAATAAATTCTAACGAGAA
TCAATGGGATCGGATAGTCACTCCATCGACCTCGCCCCCGTGAACCTCGA
CCGGATCCAATCCTGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCA
TCACGGTCCGCGAACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAA
GGCGTGAAGCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCC
CGTCGACAGTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTT
CGGCGTCTGCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACG
AGGTTCTATACCAAGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCA
TCCGTTTGTGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGG
CGGTTGGTGAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAG
ATGGGGTTCGCGTATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGA
GTATTATAGGGACCCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGC
CGATGGAAGGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCT
GCTGCTGGTGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTG
A
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Coding sequence (CDS) from alignment at MCQH01000306:277377..278427-

>ATCC10864_011730-T1 ID=ATCC10864_011730-T1|Name=ATCC10864_011730-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1908bp|location=Sequence derived from alignment at MCQH01000306:277377..278427- (Aspergillus niger ATCC 10864)
TCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCCAATCCTGGA
TCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTCCGCGAACTC
GCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAAGCTTCTCGG
CCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACAGTGTGCTCA
AGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCTGCTATCGCG
GCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTATACCAAGTC
TGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTGTGTCGCTTG
CGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGTGAGGATGGA
GAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTTCGCGTATAG
ATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATAGGGACCCAG
CGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAAGGCCCGAGT
TTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGGTGTTAGGAA
GGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGCCTCCCCGGCTCC
AATTGCTGCCCTTCCAATGGCAGCGGCCAATGGCCACCACCACGACGAAC
CTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCACCAACAGAGTCGGAA
CGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGGCGCCTACAACAAGC
GCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGGGTAAAACCTCCGGA
AGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTCCCCGCTGCGTTTAA
TGGTGGTCAAACGCCGGATATTATTGTTCATGGTGAGAGGGGGTTTAATA
ATGTTCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCCAATCC
TGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTCCGCGA
ACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAAGCTTC
TCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACAGTGTG
CTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCTGCTAT
CGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTATACCA
AGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTGTGTCG
CTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGTGAGGA
TGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTTCGCGT
ATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATAGGGAC
CCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAAGGCCC
GAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGGTGTTA
GGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGCCTCCCCGG
CTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGCCACCACCACGAC
GAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCACCAACAGAGTC
GGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGGCGCCTACAAC
AAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGGGTAAAACCTC
CGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTCCCCGCTGCGT
TTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGTGAGAGGGGGTTT
AATAATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011730ATCC10864_011730Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011730-T1ATCC10864_011730-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011730-T1.cdsATCC10864_011730-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011730-T1.exon2ATCC10864_011730-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011730-T1.exon1ATCC10864_011730-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR030878
InterProIPR021131
InterProIPR036227
PFAMPF00828
InterProIPR005749
Properties
Property NameValue
NoteBUSCO:EOG09264A2D
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:277377..278427 -
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