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ATCC10864_011805-T1, ATCC10864_011805-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011805-T1
Unique NameATCC10864_011805-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:519189..520997+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011805-T1 ID=ATCC10864_011805-T1|Name=ATCC10864_011805-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1809bp|location=Sequence derived from alignment at MCQH01000306:519189..520997+ (Aspergillus niger ATCC 10864)
ATGGATCTTTTGTCGGTCCTTCCGGACTTCCCTACCAAGCCATATGCTCA
TATTCTCCCACCTCTTGAGCGGAGCCATATCAGCACGGTCGACTTGATCA
CTCTCGACACTCTCGAAGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGAT
GTCCGCCGATTGTCCGCTCAGATCATAAGAGCACTCCACAATGATGTCGG
TTTCAAGGAGAACAGAGATCCCGATGCTGATGAGCCGAGCTCCAGCCTCA
GTGTTGATGTTCCTGTCTTCCCAGGCCCGACGACCAAGCTAGATCTATTC
CAGTGGAGTGCGATTAGTACACTCGACCCCACGTTAGACGCACTGCTTGA
TGGCGGCATACCGACGGGTTATGTGACCGAGGTGACTGGTGAGAGGTGCG
TATACTCGCTCCCCAGAGTGAGTCCGTCCGTATTCGAGGCGTCCTGACCT
AATGGGCTAATCGGTCACAGTGGGAGTGGCAAGACGCAATTCCTTCTCAC
CCTTCTCCTGGCCGCCCAACTTCCTGCACCCCGTGGTCTGGACAAGTGTG
CCATATACATTTCCACAGAAGCTCCGTTATCGACGCCACGGCTTTCGCAG
CTCATTGAATTCCATCCTTATCTATCTTCCTTGTCGCAAGCTCACACGCC
CTCGCTGGAGAAGATATTGTCTATCAATGCCATGGATCTCGAGGCACAAG
ATCACATCCTCAACTACCAACTCCCTGTTGCAATCAAGCGATATAATGTC
GGATTGGTCGTCATTGACTCCATAACTGCAAATTACCGGGCAGAACATTC
GTCCCATAATCTGTCGGGCTTGTCCACACGGTCTGGCGAGCTTTCCAGAT
TAGGCCACATGCTGAGGAACCTGGCTGTGGAGGAAAATGTCGCAGTTGTA
GTAGCGAACCAAGTTTCTGATCGCATTGAAGCTGCTGGCAGGCACCCAAC
ACTAATACGTTCGAATGGCGGTGTCATCTCATCTATTCCTTCAACGCAAC
AGCAAGTGCCGTCGTCACGTCACGAGTTAGAAGCTGTTACACCGTTGCCA
CGAAATCGACCTCTTGAGTCCCGGAATGTCGAACTGACTCCTCATAACCC
GATCCTTCAATCCTCTCCGTCTAGTCTTCCCTCGTCACCGTACACCACAG
GGGATGACCCGCAGCAGCAGCAGTTCGACGGGTCATACCTGATTGGCAAC
CCTGTACGAAACGAGATCTTGAGTCTTCTACACCAGCAGCGGTTCTTCAC
CGGGTGGGGTGACACGCTACAACCTACTATCTCAAGCCTGTACCCAGCTT
TTCAACAAGCTGCACAGAAGACCCCTGCTCTAGGCTTGGTTTGGTCTACC
CAGATTGCATGTCGCATTGCACTGAAAAAGGAGACCCGCTTTGTGGATTG
GGAGGCCATTCTAGAGGACACGTTTGTCTCCAGCGAGCAGCATTTGCTGC
CTACAGCAAGAGAGCAGGCCAATGAGCCCCCGGATTCACGAGTAGCAATG
GAGAATGAAGAACAATCTAGGGCACACCACCCTGCAGTCTGTGCACCACC
GGACGAGACCGATGCAGTAGACGATAAGACGAATCTCGATGTCCCGAATA
CTGTCCGTGATGATCATGCAGCAACCGGGCAATCCTCACCATTGTCATCA
CAGGCAGTTACACAAGGCGTTCGAAGAACCATGAAACTTGTATTTGCCCC
CTGGACTGCCGGCCCAGTCACAGAGCAAGGCGAGATCCAACACGAGGCGG
AGTTTGAAATCTGGAAGGGTGGGCTGAGGGGCTGTACAGAGGATTTTGAC
ACCATCTAG
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Coding sequence (CDS) from alignment at MCQH01000306:519189..520997+

>ATCC10864_011805-T1 ID=ATCC10864_011805-T1|Name=ATCC10864_011805-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3468bp|location=Sequence derived from alignment at MCQH01000306:519189..520997+ (Aspergillus niger ATCC 10864)
ATGGATCTTTTGTCGGTCCTTCCGGACTTCCCTACCAAGCCATATGCTCA
TATTCTCCCACCTCTTGAGCGGAGCCATATCAGCACGGTCGACTTGATCA
CTCTCGACACTCTCGAAGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGAT
GTCCGCCGATTGTCCGCTCAGATCATAAGAGCACTCCACAATGATGTCGG
TTTCAAGGAGAACAGAGATCCCGATGCTGATGAGCCGAGCTCCAGCCTCA
GTGTTGATGTTCCTGTCTTCCCAGGCCCGACGACCAAGCTAGATCTATTC
CAGTGGAGTGCGATTAGTACACTCGACCCCACGTTAGACGCACTGCTTGA
TGGCGGCATACCGACGGGTTATGTGACCGAGGTGACTGGTGAGAGTGGGA
GTGGCAAGACGCAATTCCTTCTCACCCTTCTCCTGGCCGCCCAACTTCCT
GCACCCCGTGGTCTGGACAAGTGTGCCATATACATTTCCACAGAAGCTCC
GTTATCGACGCCACGGCTTTCGCAGCTCATTGAATTCCATCCTTATCTAT
CTTCCTTGTCGCAAGCTCACACGCCCTCGCTGGAGAAGATATTGTCTATC
AATGCCATGGATCTCGAGGCACAAGATCACATCCTCAACTACCAACTCCC
TGTTGCAATCAAGCGATATAATGTCGGATTGGTCGTCATTGACTCCATAA
CTGCAAATTACCGGGCAGAACATTCGTCCCATAATCTGTCGGGCTTGTCC
ACACGGTCTGGCGAGCTTTCCAGATTAGGCCACATGCTGAGGAACCTGGC
TGTGGAGGAAAATGTCGCAGTTGTAGTAGCGAACCAAGTTTCTGATCGCA
TTGAAGCTGCTGGCAGGCACCCAACACTAATACGTTCGAATGGCGGTGTC
ATCTCATCTATTCCTTCAACGCAACAGCAAGTGCCGTCGTCACGTCACGA
GTTAGAAGCTGTTACACCGTTGCCACGAAATCGACCTCTTGAGTCCCGGA
ATGTCGAACTGACTCCTCATAACCCGATCCTTCAATCCTCTCCGTCTAGT
CTTCCCTCGTCACCGTACACCACAGGGGATGACCCGCAGCAGCAGCAGTT
CGACGGGTCATACCTGATTGGCAACCCTGTACGAAACGAGATCTTGAGTC
TTCTACACCAGCAGCGGTTCTTCACCGGGTGGGGTGACACGCTACAACCT
ACTATCTCAAGCCTGTACCCAGCTTTTCAACAAGCTGCACAGAAGACCCC
TGCTCTAGGCTTGGTTTGGTCTACCCAGATTGCATGTCGCATTGCACTGA
AAAAGGAGACCCGCTTTGTGGATTGGGAGGCCATTCTAGAGGACACGTTT
GTCTCCAGCGAGCAGCATTTGCTGCCTACAGCAAGAGAGCAGGCCAATGA
GCCCCCGGATTCACGAGTAGCAATGGAGAATGAAGAACAATCTAGGGCAC
ACCACCCTGCAGTCTGTGCACCACCGGACGAGACCGATGCAGTAGACGAT
AAGACGAATCTCGATGTCCCGAATACTGTCCGTGATGATCATGCAGCAAC
CGGGCAATCCTCACCATTGTCATCACAGGCAGTTACACAAGGCGTTCGAA
GAACCATGAAACTTGTATTTGCCCCCTGGACTGCCGGCCCAGTCACAGAG
CAAGGCGAGATCCAACACGAGGCGGAGTTTGAAATCTGGAAGGGTGGGCT
GAGGGGCTGTACAGAGGATTTTGACACCATCTAGATGGATCTTTTGTCGG
TCCTTCCGGACTTCCCTACCAAGCCATATGCTCATATTCTCCCACCTCTT
GAGCGGAGCCATATCAGCACGGTCGACTTGATCACTCTCGACACTCTCGA
AGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGATGTCCGCCGATTGTCCG
CTCAGATCATAAGAGCACTCCACAATGATGTCGGTTTCAAGGAGAACAGA
GATCCCGATGCTGATGAGCCGAGCTCCAGCCTCAGTGTTGATGTTCCTGT
CTTCCCAGGCCCGACGACCAAGCTAGATCTATTCCAGTGGAGTGCGATTA
GTACACTCGACCCCACGTTAGACGCACTGCTTGATGGCGGCATACCGACG
GGTTATGTGACCGAGGTGACTGGTGAGAGTGGGAGTGGCAAGACGCAATT
CCTTCTCACCCTTCTCCTGGCCGCCCAACTTCCTGCACCCCGTGGTCTGG
ACAAGTGTGCCATATACATTTCCACAGAAGCTCCGTTATCGACGCCACGG
CTTTCGCAGCTCATTGAATTCCATCCTTATCTATCTTCCTTGTCGCAAGC
TCACACGCCCTCGCTGGAGAAGATATTGTCTATCAATGCCATGGATCTCG
AGGCACAAGATCACATCCTCAACTACCAACTCCCTGTTGCAATCAAGCGA
TATAATGTCGGATTGGTCGTCATTGACTCCATAACTGCAAATTACCGGGC
AGAACATTCGTCCCATAATCTGTCGGGCTTGTCCACACGGTCTGGCGAGC
TTTCCAGATTAGGCCACATGCTGAGGAACCTGGCTGTGGAGGAAAATGTC
GCAGTTGTAGTAGCGAACCAAGTTTCTGATCGCATTGAAGCTGCTGGCAG
GCACCCAACACTAATACGTTCGAATGGCGGTGTCATCTCATCTATTCCTT
CAACGCAACAGCAAGTGCCGTCGTCACGTCACGAGTTAGAAGCTGTTACA
CCGTTGCCACGAAATCGACCTCTTGAGTCCCGGAATGTCGAACTGACTCC
TCATAACCCGATCCTTCAATCCTCTCCGTCTAGTCTTCCCTCGTCACCGT
ACACCACAGGGGATGACCCGCAGCAGCAGCAGTTCGACGGGTCATACCTG
ATTGGCAACCCTGTACGAAACGAGATCTTGAGTCTTCTACACCAGCAGCG
GTTCTTCACCGGGTGGGGTGACACGCTACAACCTACTATCTCAAGCCTGT
ACCCAGCTTTTCAACAAGCTGCACAGAAGACCCCTGCTCTAGGCTTGGTT
TGGTCTACCCAGATTGCATGTCGCATTGCACTGAAAAAGGAGACCCGCTT
TGTGGATTGGGAGGCCATTCTAGAGGACACGTTTGTCTCCAGCGAGCAGC
ATTTGCTGCCTACAGCAAGAGAGCAGGCCAATGAGCCCCCGGATTCACGA
GTAGCAATGGAGAATGAAGAACAATCTAGGGCACACCACCCTGCAGTCTG
TGCACCACCGGACGAGACCGATGCAGTAGACGATAAGACGAATCTCGATG
TCCCGAATACTGTCCGTGATGATCATGCAGCAACCGGGCAATCCTCACCA
TTGTCATCACAGGCAGTTACACAAGGCGTTCGAAGAACCATGAAACTTGT
ATTTGCCCCCTGGACTGCCGGCCCAGTCACAGAGCAAGGCGAGATCCAAC
ACGAGGCGGAGTTTGAAATCTGGAAGGGTGGGCTGAGGGGCTGTACAGAG
GATTTTGACACCATCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011805ATCC10864_011805Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011805-T1.exon1ATCC10864_011805-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011805-T1.exon2ATCC10864_011805-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011805-T1.cdsATCC10864_011805-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011805-T1ATCC10864_011805-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR020588
InterProIPR027417
PFAMPF13481
InterProIPR013632
InterProIPR003593
PFAMPF08423
PFAMPF06745
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:519189..520997 +
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