You are here

ATCC10864_011816-T1, ATCC10864_011816-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011816-T1
Unique NameATCC10864_011816-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000306:557143..558611-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011816-T1 ID=ATCC10864_011816-T1|Name=ATCC10864_011816-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1469bp|location=Sequence derived from alignment at MCQH01000306:557143..558611- (Aspergillus niger ATCC 10864)
ATGCAAGGCATAAACAAAGGGCGGCCTCGATACGACCGACGGAAAAAACC CAGTCCGATACAGCAGGATCAGCTTCCATCGCCACAATTAACGAAAATGT ATCAGGACTCCGACATCATCCAGTCGAATAAACTAGTCGTGGGGCCTGAT CCGTCTTTCGCTCAATTCGCCGTTCAAGTGGACTCCCGCACCTTCGCTGA TATACTACGATGTAAGTAGGTTCTCCCGTATCCTAACCCATCGTTCGTTT GCGTAGCTAACGCGAATACCATTTAGTCGCCAAATTATCAATGCAAATGT TCTTCCCATTGGGTTTCTTGATTGATTTCGACTGTAGGGATAAATCCTGG TTCCACGACTCTATACGCTCCGATGCAGCGTATCTGCATCTCACCGTGTC CGCATCAGAGGTGTTCATGGGCTCGGTTCACGGTCGACAGAATGCCGATG AACTACTTGCTAATCGCAGGACCATGCTCCATTTTGCAAAGGGCGTGCAG ATCCTCCGCGAGAGACTGACGGGCGTCGATCTCCAGACAAAAATATCCGA CTTCACTGTACGAACTGTACTAATGCTAGCCATGACAGCGCATCTGATGG GCGAATCGGAGGTCGCGCAGAAACACATGGAGGGCATTCGAACAATCATG GATCTTCGAGGAGGTCTGCGCTTATTTGAAAGCCAGAAGATTCTCATCGA GCTGTTCAGGTAAGCCACCTACTTCCCCATAACAGCCAACCTACTACAAT AATTGACCACCATTAGATGGGACCTAGGCCTCGCCCTCCAAAACAACACC ACGCCCATGTTCTTCAGAGACAAATTCCTCGAGCCACTCACTCCATTCCC CACCATCTTCAACCCCACCTTGAACCAAATTAACAATCCCATCCTCCCCC AACTCCATTTAGACCCAACCCTAAAGACAACCTTTCACGTCCTCCAAAAC TTCTGCACCCTAATCAACACAAGCATCACCGAGACCCCCCAACGCCGCCT CTCCCCAGACATCATCCCTTCCACGCTCTCCTCCGTAATGTATCGTCTTC TCCAAATGCCTTTCCCCATGAACAGCAACAACGAAGCCTTCCGTCTAGGT CTCCTCACCTTCTGCCATCATACCTTTCTTCAGTGGCAGGATAAGACACT GCCTTTCGTATATTTCCCTGCCTCGTATCAATCATGCCTTTTATCGTTGA TGGAACAATGCCAACGTCGTCAAGATGAAGAGGAGGATTCCTCGGAGCTT ATTCTCTGGCTATTGATGGTCGGAATCCTTGCATTGCCGCCGCTGCCGTC GTTTCTGGGGACGGATCTCTGGATGAGGGGGTATTTGCGGGAGTCGTTGG AGAAGTTGGAGATCAGGACGTGGGGGGAGTTGCGGGGGATTATGAAGAGG TGGGTGTGGGTGGATTTGATGCATGATCTTGCTGGGGAGGGAGTGTTGGG TGATGTGCTGAAAGTATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000306:557143..558611-

>ATCC10864_011816-T1 ID=ATCC10864_011816-T1|Name=ATCC10864_011816-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4041bp|location=Sequence derived from alignment at MCQH01000306:557143..558611- (Aspergillus niger ATCC 10864)
ATGGGACCTAGGCCTCGCCCTCCAAAACAACACCACGCCCATGTTCTTCA
GAGACAAATTCCTCGAGCCACTCACTCCATTCCCCACCATCTTCAACCCC
ACCTTGAACCAAATTAACAATCCCATCCTCCCCCAACTCCATTTAGACCC
AACCCTAAAGACAACCTTTCACGTCCTCCAAAACTTCTGCACCCTAATCA
ACACAAGCATCACCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCATC
CCTTCCACGCTCTCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTCCC
CATGAACAGCAACAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTGCC
ATCATACCTTTCTTCAGTGGCAGGATAAGACACTGCCTTTCGTATATTTC
CCTGCCTCGTATCAATCATGCCTTTTATCGTTGATGGAACAATGCCAACG
TCGTCAAGATGAAGAGGAGGATTCCTCGGAGCTTATTCTCTGGCTATTGA
TGGTCGGAATCCTTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGGAT
CTCTGGATGAGGGGGTATTTGCGGGAGTCGTTGGAGAAGTTGGAGATCAG
GACGTGGGGGGAGTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGATT
TGATGCATGATCTTGCTGGGGAGGGAGTGTTGGGTGATGTGCTGAAAGTA
TAATCGCCAAATTATCAATGCAAATGTTCTTCCCATTGGGTTTCTTGATT
GATTTCGACTGTAGGGATAAATCCTGGTTCCACGACTCTATACGCTCCGA
TGCAGCGTATCTGCATCTCACCGTGTCCGCATCAGAGGTGTTCATGGGCT
CGGTTCACGGTCGACAGAATGCCGATGAACTACTTGCTAATCGCAGGACC
ATGCTCCATTTTGCAAAGGGCGTGCAGATCCTCCGCGAGAGACTGACGGG
CGTCGATCTCCAGACAAAAATATCCGACTTCACTGTACGAACTGTACTAA
TGCTAGCCATGACAGCGCATCTGATGGGCGAATCGGAGGTCGCGCAGAAA
CACATGGAGGGCATTCGAACAATCATGGATCTTCGAGGAGGTCTGCGCTT
ATTTGAAAGCCAGAAGATTCTCATCGAGCTGTTCAGATGCAAGGCATAAA
CAAAGGGCGGCCTCGATACGACCGACGGAAAAAACCCAGTCCGATACAGC
AGGATCAGCTTCCATCGCCACAATTAACGAAAATGTATCAGGACTCCGAC
ATCATCCAGTCGAATAAACTAGTCGTGGGGCCTGATCCGTCTTTCGCTCA
ATTCGCCGTTCAAGTGGACTCCCGCACCTTCGCTGATATACTACGATATG
GGACCTAGGCCTCGCCCTCCAAAACAACACCACGCCCATGTTCTTCAGAG
ACAAATTCCTCGAGCCACTCACTCCATTCCCCACCATCTTCAACCCCACC
TTGAACCAAATTAACAATCCCATCCTCCCCCAACTCCATTTAGACCCAAC
CCTAAAGACAACCTTTCACGTCCTCCAAAACTTCTGCACCCTAATCAACA
CAAGCATCACCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCATCCCT
TCCACGCTCTCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTCCCCAT
GAACAGCAACAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTGCCATC
ATACCTTTCTTCAGTGGCAGGATAAGACACTGCCTTTCGTATATTTCCCT
GCCTCGTATCAATCATGCCTTTTATCGTTGATGGAACAATGCCAACGTCG
TCAAGATGAAGAGGAGGATTCCTCGGAGCTTATTCTCTGGCTATTGATGG
TCGGAATCCTTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGGATCTC
TGGATGAGGGGGTATTTGCGGGAGTCGTTGGAGAAGTTGGAGATCAGGAC
GTGGGGGGAGTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGATTTGA
TGCATGATCTTGCTGGGGAGGGAGTGTTGGGTGATGTGCTGAAAGTATAA
TCGCCAAATTATCAATGCAAATGTTCTTCCCATTGGGTTTCTTGATTGAT
TTCGACTGTAGGGATAAATCCTGGTTCCACGACTCTATACGCTCCGATGC
AGCGTATCTGCATCTCACCGTGTCCGCATCAGAGGTGTTCATGGGCTCGG
TTCACGGTCGACAGAATGCCGATGAACTACTTGCTAATCGCAGGACCATG
CTCCATTTTGCAAAGGGCGTGCAGATCCTCCGCGAGAGACTGACGGGCGT
CGATCTCCAGACAAAAATATCCGACTTCACTGTACGAACTGTACTAATGC
TAGCCATGACAGCGCATCTGATGGGCGAATCGGAGGTCGCGCAGAAACAC
ATGGAGGGCATTCGAACAATCATGGATCTTCGAGGAGGTCTGCGCTTATT
TGAAAGCCAGAAGATTCTCATCGAGCTGTTCAGATGCAAGGCATAAACAA
AGGGCGGCCTCGATACGACCGACGGAAAAAACCCAGTCCGATACAGCAGG
ATCAGCTTCCATCGCCACAATTAACGAAAATGTATCAGGACTCCGACATC
ATCCAGTCGAATAAACTAGTCGTGGGGCCTGATCCGTCTTTCGCTCAATT
CGCCGTTCAAGTGGACTCCCGCACCTTCGCTGATATACTACGATATGGGA
CCTAGGCCTCGCCCTCCAAAACAACACCACGCCCATGTTCTTCAGAGACA
AATTCCTCGAGCCACTCACTCCATTCCCCACCATCTTCAACCCCACCTTG
AACCAAATTAACAATCCCATCCTCCCCCAACTCCATTTAGACCCAACCCT
AAAGACAACCTTTCACGTCCTCCAAAACTTCTGCACCCTAATCAACACAA
GCATCACCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCATCCCTTCC
ACGCTCTCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTCCCCATGAA
CAGCAACAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTGCCATCATA
CCTTTCTTCAGTGGCAGGATAAGACACTGCCTTTCGTATATTTCCCTGCC
TCGTATCAATCATGCCTTTTATCGTTGATGGAACAATGCCAACGTCGTCA
AGATGAAGAGGAGGATTCCTCGGAGCTTATTCTCTGGCTATTGATGGTCG
GAATCCTTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGGATCTCTGG
ATGAGGGGGTATTTGCGGGAGTCGTTGGAGAAGTTGGAGATCAGGACGTG
GGGGGAGTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGATTTGATGC
ATGATCTTGCTGGGGAGGGAGTGTTGGGTGATGTGCTGAAAGTATAATCG
CCAAATTATCAATGCAAATGTTCTTCCCATTGGGTTTCTTGATTGATTTC
GACTGTAGGGATAAATCCTGGTTCCACGACTCTATACGCTCCGATGCAGC
GTATCTGCATCTCACCGTGTCCGCATCAGAGGTGTTCATGGGCTCGGTTC
ACGGTCGACAGAATGCCGATGAACTACTTGCTAATCGCAGGACCATGCTC
CATTTTGCAAAGGGCGTGCAGATCCTCCGCGAGAGACTGACGGGCGTCGA
TCTCCAGACAAAAATATCCGACTTCACTGTACGAACTGTACTAATGCTAG
CCATGACAGCGCATCTGATGGGCGAATCGGAGGTCGCGCAGAAACACATG
GAGGGCATTCGAACAATCATGGATCTTCGAGGAGGTCTGCGCTTATTTGA
AAGCCAGAAGATTCTCATCGAGCTGTTCAGATGCAAGGCATAAACAAAGG
GCGGCCTCGATACGACCGACGGAAAAAACCCAGTCCGATACAGCAGGATC
AGCTTCCATCGCCACAATTAACGAAAATGTATCAGGACTCCGACATCATC
CAGTCGAATAAACTAGTCGTGGGGCCTGATCCGTCTTTCGCTCAATTCGC
CGTTCAAGTGGACTCCCGCACCTTCGCTGATATACTACGAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011816ATCC10864_011816Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011816-T1ATCC10864_011816-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011816-T1.cdsATCC10864_011816-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011816-T1.exon3ATCC10864_011816-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011816-T1.exon2ATCC10864_011816-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011816-T1.exon1ATCC10864_011816-T1.exon1Aspergillus niger ATCC 10864exon


Properties
Property NameValue
NoteantiSMASH:Cluster_1000306.4
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000306supercontigMCQH01000306:557143..558611 -