You are here

Home

ATCC10864_011909-T1, ATCC10864_011909-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011909-T1
Unique NameATCC10864_011909-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000310:250256..251328+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011909-T1 ID=ATCC10864_011909-T1|Name=ATCC10864_011909-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1073bp|location=Sequence derived from alignment at MCQH01000310:250256..251328+ (Aspergillus niger ATCC 10864)
ATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCT
TCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTT
CCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGC
ACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAG
GGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGT
GTATGTGTCATCCATCACCACCACCAGCACCCTCTGGCAGTAGTTGGGCT
CTCGAGAACGGAAATAACAGCCGTATAACCAATCCACAGGGTATCCATCC
AAAGATGAACTTTCTATTCTTAGCGATGTCATAGATCAGATCAACGATAG
GCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTTG
GCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGACCGGTCGTGCTACGA
ACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAGTCTCAGCTGAAAGA
ATCGCAAATTCCAGCGTAAGTAGCTGACTTGTTTATTTGTTTCGGTCTTA
ATGTTTTTGTGATTGATCAATCCACCATGCTGACAAGCTATGCAAGGTTC
AACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGAAGACGCG
GTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGAAAATGCTTTGAACC
GTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACAGCCTCCG
CTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAAATGGTGG
TGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACCGGAGCTG
ACTACTCTCGCTGCTTTCATATCTCGTTGGCGTGGAGCTTGACAGGTCTG
TCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGAAGGTACG
TGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGAAACCATG
TTTCTAGTATACCGCTGCAGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000310:250256..251328+

>ATCC10864_011909-T1 ID=ATCC10864_011909-T1|Name=ATCC10864_011909-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2709bp|location=Sequence derived from alignment at MCQH01000310:250256..251328+ (Aspergillus niger ATCC 10864)
ATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGCT
TCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCTT
CCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAGC
ACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAAG
GGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAGT
GGTATCCATCCAAAGATGAACTTTCTATTCTTAGCGATGTCATAGATCAG
ATCAACGATAGGCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACA
TAGTGATCTTGGCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGACCGG
TCGTGCTACGAACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAGTCT
CAGCTGAAAGAATCGCAAATTCCAGCGTTCAACGTCACGACAAATAGCCT
CGACTGTGTCTCGAATTACGAGAAGACGCGGTGGTTTTATGTCTTACGTG
CTGAAAAGCCAGAGGAAAATGCTTTGAACCGTCTTCTTCGGCTGTCTAAT
CGAGCCCTGGCTCGGTTCGAACAGCCTCCGCTATACGAGTCGTCACAGGA
TGTGGCGGCTGTGCGGAAGTCAAATGGTGGTGGTACGACACTGCCACGGG
AATCGAGCGATTCTGGCCAAACCGGAGCTGACTACTCTCGCTGCTTTCAT
ATCTCGTTGGCGTGGAGCTTGACAGGTCTGTCGTCTGCAGAGAGTGAGCT
GATCGGAGGTGTGGATTTGCAGAAGGTACGTGAGTTGAGTGTGCGGTTTG
ATTGTGTCAAGGTGAAAGTTGGAAACCATGTTTCTAGTATACCGCTGCAG
TAGATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGA
GCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCAT
CTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCC
AGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAA
AAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGG
AGTGGTATCCATCCAAAGATGAACTTTCTATTCTTAGCGATGTCATAGAT
CAGATCAACGATAGGCTCGATGGGAGCACGATTCAGCTCCACAGCCTACT
ACATAGTGATCTTGGCGCGCAACTGCCCCTCCACATTAGTCTGTCTAGAC
CGGTCGTGCTACGAACAGAACAGCGGCAGTCATTTTTGGAGCTATTTCAG
TCTCAGCTGAAAGAATCGCAAATTCCAGCGTTCAACGTCACGACAAATAG
CCTCGACTGTGTCTCGAATTACGAGAAGACGCGGTGGTTTTATGTCTTAC
GTGCTGAAAAGCCAGAGGAAAATGCTTTGAACCGTCTTCTTCGGCTGTCT
AATCGAGCCCTGGCTCGGTTCGAACAGCCTCCGCTATACGAGTCGTCACA
GGATGTGGCGGCTGTGCGGAAGTCAAATGGTGGTGGTACGACACTGCCAC
GGGAATCGAGCGATTCTGGCCAAACCGGAGCTGACTACTCTCGCTGCTTT
CATATCTCGTTGGCGTGGAGCTTGACAGGTCTGTCGTCTGCAGAGAGTGA
GCTGATCGGAGGTGTGGATTTGCAGAAGGTACGTGAGTTGAGTGTGCGGT
TTGATTGTGTCAAGGTGAAAGTTGGAAACCATGTTTCTAGTATACCGCTG
CAGTAGATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAA
CGAGCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATC
CATCTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCC
TCCAGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCG
AAAAAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACT
TGGAGTGGTATCCATCCAAAGATGAACTTTCTATTCTTAGCGATGTCATA
GATCAGATCAACGATAGGCTCGATGGGAGCACGATTCAGCTCCACAGCCT
ACTACATAGTGATCTTGGCGCGCAACTGCCCCTCCACATTAGTCTGTCTA
GACCGGTCGTGCTACGAACAGAACAGCGGCAGTCATTTTTGGAGCTATTT
CAGTCTCAGCTGAAAGAATCGCAAATTCCAGCGTTCAACGTCACGACAAA
TAGCCTCGACTGTGTCTCGAATTACGAGAAGACGCGGTGGTTTTATGTCT
TACGTGCTGAAAAGCCAGAGGAAAATGCTTTGAACCGTCTTCTTCGGCTG
TCTAATCGAGCCCTGGCTCGGTTCGAACAGCCTCCGCTATACGAGTCGTC
ACAGGATGTGGCGGCTGTGCGGAAGTCAAATGGTGGTGGTACGACACTGC
CACGGGAATCGAGCGATTCTGGCCAAACCGGAGCTGACTACTCTCGCTGC
TTTCATATCTCGTTGGCGTGGAGCTTGACAGGTCTGTCGTCTGCAGAGAG
TGAGCTGATCGGAGGTGTGGATTTGCAGAAGGTACGTGAGTTGAGTGTGC
GGTTTGATTGTGTCAAGGTGAAAGTTGGAAACCATGTTTCTAGTATACCG
CTGCAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0034477U6 snRNA 3'-end processing
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011909ATCC10864_011909Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011909-T1.exon1ATCC10864_011909-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011909-T1.exon2ATCC10864_011909-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011909-T1.exon3ATCC10864_011909-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011909-T1.cdsATCC10864_011909-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011909-T1ATCC10864_011909-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF09749
InterProIPR027521
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000310supercontigMCQH01000310:250256..251328 +
Powered by Drupal