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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000310:295325..295994+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_011925-T1 ID=ATCC10864_011925-T1|Name=ATCC10864_011925-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=670bp|location=Sequence derived from alignment at MCQH01000310:295325..295994+ (Aspergillus niger ATCC 10864)
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGGTATGATATTCGCGATTAAT
ACCCCGCCAAACTTTCCCCGATACAGAGCACCGAAGCTAACATTGCGGTT
TTCCAACAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCG
CAAAGTCATTGGTATCCTGCGAGGCTATGATGTACGTCGCGCTTGTGCCC
CCTGGATTTCTACTTTCCTGCCTGCTGTGTTGCTGTTATACGGGTTGATA
TGCCTTGGATGGGGTCGAAGATTGAGATGTTCTTGGGTTCAATCCATCGA
GTGAAAGAGGGGGCGGGGAGAGTGTGTGTATGTGTGTATAGGTTACTGAC
GTCTGCGCTTGTCTATACAGGTGTTCATGAACATTGTCCTTGACGAGGCT
TTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGTATG
TGGCTAGTCCCATTCCCGGACGTCTACGTTTGGTCTGCAAACTGGGAGGG
GCAGGAAGCTAATGGCTATCTATTCGTCTTAATAGGTCATTCGCGGTAAC
TCGGTTGTTATGCTCGAGGTCAGTATCACCTGCCATAGGACTACGATTGA
TGGCGTGCCTTATCAAGAGACTAACCTTTTGTACTTAAAATAGGCCCTGG
AACGTATCAGCGACAAATAA back to topCoding sequence (CDS) from alignment at MCQH01000310:295325..295994+ >ATCC10864_011925-T1 ID=ATCC10864_011925-T1|Name=ATCC10864_011925-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1185bp|location=Sequence derived from alignment at MCQH01000310:295325..295994+ (Aspergillus niger ATCC 10864)
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATT
CTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATG
ATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGT
GGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGT
TATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAAATGCCTCAAGCCC
AGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAAC
GGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAA
CATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTG
CTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCC
CTGGAACGTATCAGCGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAA
GAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAG
TCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAACATTGTCCTTGAC
GAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGAT
TGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCA
GCGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAA
AAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCT
GCGAGGCTATGATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGG
AGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGT
AACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAAAT
GCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCT
GCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATGAT
GTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGG
TGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTA
TGCTCGAGGCCCTGGAACGTATCAGCGACAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000387 | spliceosomal snRNP assembly |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR034098 |
| InterPro | IPR010920 |
| InterPro | IPR001163 |
| PFAM | PF01423 |
| InterPro | IPR044641 |
Properties
| Property Name | Value |
|---|
| Product | Serine/threonine-protein kinase smg1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000310 | supercontig | MCQH01000310:295325..295994 + |
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