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M747DRAFT_111204-T1, M747DRAFT_111204-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_111204-T1
Unique NameM747DRAFT_111204-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851937.1:141021..142368-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_111204-T1 ID=M747DRAFT_111204-T1|Name=M747DRAFT_111204-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1348bp|location=Sequence derived from alignment at KZ851937.1:141021..142368- (Aspergillus niger ATCC 13496)
CGGTCTGCGTCGCGCGCGCGCCTTCCCATCCCTTTCCAACACACTTAGCT
TTCTCATTTCGTCTTTTCGGTTTCCGTCATTATGGCTACAGAGTACGATA
ACGAGAACGGTCGCTACGACGGTATGTCAACCGGTTATCTTGCCTCGCCA
GCCCAGCTGATTTCCCCGGTAACATCATCACAACAATGCTGACTCGCTGC
TCAGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGA
GCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATG
ACCGGTATGTTTACGTGCAGATCTAGCTAGCTAGCTAGCCAACCCCCAGA
CGTCAGCCAGACTGACTGGAGCTCCTCATAACTAGCGCCCCCATTGATCC
CCGCAAGTCTCTCGATGACGAAGAGGGTGCTATCAACACTGGATCCAACC
TGTTCGTCACTGGTATCCACCCCCGTCTGACCGAGTCGGATATTTCGCGT
CTGTTCGAGAAGTACGGTGATGTCGAAAACTGCTCGATCATGGTCGACCC
CCACACCAAGGAGTCTCGTGGATTCGGCTTCGTCAAGATGGTCACTGCCG
AGCAGGCCGATGCCGCTAAGGAGGGTCTCCAGGGCGAGGTCATCGAAGGT
CGCACCCTGAGCATTGAGAAGGCTCGTCGTAGCCGTCCCAGAACCCCGAC
CCCCGGAAAGTACTTCGGTCCTCCCAAGCGTGGTTAGTTATCCAGACTCC
CTCTGTATATTGATATGTGGCTTACGCGTGTCCAATATCGTCAGATTTCC
GTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCGTGGT
CCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCCGTTA
TGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGACTACG
GTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGGCAGC
AGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTTACAG
CCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCGGCAGCG
GTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGCTCCGCA
GCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGGTGGCGG
CGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACAGCACTA
GGTAGGTGAAGTTTTGACTGATCTGGACGGTCGGAACAGGACCCAGAGCA
CGTAACCTCGTCCAGTGATGGGTCCGTTTAGCCACCGCGCTTCTTTCA
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Coding sequence (CDS) from alignment at KZ851937.1:141021..142368-

>M747DRAFT_111204-T1 ID=M747DRAFT_111204-T1|Name=M747DRAFT_111204-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3792bp|location=Sequence derived from alignment at KZ851937.1:141021..142368- (Aspergillus niger ATCC 13496)
ATTTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGT
CGTGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGG
CCGTTATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTG
ACTACGGTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGT
GGCAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCG
TTACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCG
GCAGCGGTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGC
TCCGCAGCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGG
TGGCGGCGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACA
GCACTAGGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGA
GGGTGCTATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCC
GTCTGACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTC
GAAAACTGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATT
CGGCTTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGG
GTCTCCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCT
CGTCGTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCC
CAAGCGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCG
ATGAGCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTC
GATGACCGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGAT
TTCCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCG
TGGTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCC
GTTATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGAC
TACGGTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGG
CAGCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTT
ACAGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCGGC
AGCGGTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGCTC
CGCAGCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGGTG
GCGGCGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACAGC
ACTAGGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGG
GTGCTATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGT
CTGACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGA
AAACTGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCG
GCTTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGT
CTCCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCG
TCGTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCA
AGCGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGAT
GAGCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGA
TGACCGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGATTT
CCGTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCGTG
GTCCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCCGT
TATGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGACTA
CGGTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGGCA
GCAGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTTAC
AGCCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCGGCAG
CGGTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGCTCCG
CAGCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGGTGGC
GGCGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACAGCAC
TAGGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGT
GCTATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCT
GACCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAA
ACTGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGC
TTCGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCT
CCAGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTC
GTAGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAG
CGTGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGA
GCCTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATG
ACCGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACGATTTCC
GTGGAGGTCACCGTGGCGGCCGTGGCGATCGCTATGACGATCGTCGTGGT
CCTTATGGTGGTAGCTGGCGCCGTGGCGACGACTACCGCTATGGCCGTTA
TGACTCCTACAGCGACCGCCGCGACTATGGTCGTGACTACCGTGACTACG
GTGGCCGCCGTGACTACCGTGATGACTATGGATACCGCGGTGGTGGCAGC
AGCGGTGGCATTGATCGCTATGCTTCCGGTGGCCGCGAGGACCGTTACAG
CCGCGAGGACCGTCGTGACGATCGCCGTGAAGAGCGTCGTGGCGGCAGCG
GTGGTGGCTACTATGACCGCGATGCTAACCCGCCCAGCTACGGCTCCGCA
GCTCCTGCTCGTGATGCCTACGCCGGCGGCGGTGGCAGCAGCGGTGGCGG
CGGCGGCGGCGGCCGTTCCTATGATCCCCGTGACGACCGTTACAGCACTA
GGTAGCGCCCCCATTGATCCCCGCAAGTCTCTCGATGACGAAGAGGGTGC
TATCAACACTGGATCCAACCTGTTCGTCACTGGTATCCACCCCCGTCTGA
CCGAGTCGGATATTTCGCGTCTGTTCGAGAAGTACGGTGATGTCGAAAAC
TGCTCGATCATGGTCGACCCCCACACCAAGGAGTCTCGTGGATTCGGCTT
CGTCAAGATGGTCACTGCCGAGCAGGCCGATGCCGCTAAGGAGGGTCTCC
AGGGCGAGGTCATCGAAGGTCGCACCCTGAGCATTGAGAAGGCTCGTCGT
AGCCGTCCCAGAACCCCGACCCCCGGAAAGTACTTCGGTCCTCCCAAGCG
TGACGAGCCCCGTTTCGCTCGCGACCGCAGCGCATCTCCTCGCGATGAGC
CTCGTGCTGATCGCACCCGTAGCCGTTCTCCCAACGGTCGCGTCGATGAC
CGATGGCTACAGAGTACGATAACGAGAACGGTCGCTACGACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_111204M747DRAFT_111204Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_111204-T1M747DRAFT_111204-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_111204-T1.cdsM747DRAFT_111204-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_111204-T1.utr3p1M747DRAFT_111204-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_111204-T1.exon4M747DRAFT_111204-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_111204-T1.exon3M747DRAFT_111204-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_111204-T1.exon2M747DRAFT_111204-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_111204-T1.exon1M747DRAFT_111204-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_111204-T1.utr5p1M747DRAFT_111204-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA-binding domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851937.1supercontigKZ851937.1:141021..142368 -
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