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M747DRAFT_118187-T1, M747DRAFT_118187-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_118187-T1
Unique NameM747DRAFT_118187-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851902.1:1177704..1178754-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_118187-T1 ID=M747DRAFT_118187-T1|Name=M747DRAFT_118187-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1051bp|location=Sequence derived from alignment at KZ851902.1:1177704..1178754- (Aspergillus niger ATCC 13496)
ACTCAATTCAATCCTTTCATCGTCCACTTCCCAACTCAATGGACAAAAAC
ACAGAGATATCAGTGAATATACATGACAAACGTGAATTTGCTTGTTCACA
GTGTCCCCGCAGCTATTCTCGCATTGATCATCTTTCGCGCCATGCACGTT
CACGTATGTCTGTCCTAATCCACTGGAGATACCACCCACGCATCCCGCAC
CCACAACCCCAAGCCTCACTCTGCGATACTGACCGTCACACAATGGTAGA
TCTATTATCTAATCCATATCAATGTGACATATGCCATCGGGGATTTTCTA
GGCGGTGCGGCCGATTATCGCGCCCCTCAGTGCTAATACTGATACTAACA
TAACGTCGGTCGGCCGATTACTAGAGATCTTCTTCAGCGCCACAAAACCA
TTCATGAAGCCAGAGGAGGGCTTCCTAGGAAGTTAGACCGCCAAGGGCGG
ACATCGCGTGCATGTCTGGCTTGCGGTATGGCCAAGCTGAAGTGCAACGA
GAGCAAACCATGTAGTCGATGTCTTTCTCGGCAGATTCCCTGCAAATCCC
TTCCAGATCGACGACGTCAGCCGCGTCCAAAGAATACGACCTTGTCCCCT
TGCTTGTCCAACAGAACTGCAATACCTCTCAGGCGTTCAGCAGATGTGGC
ATGGGCTCAGTCAACTCGGGATCCATGTCTTACCAACCGACAGCTGGATG
ATTATCCTCCCTCGATTCCTGGGTTCCGAGAACAGGTGTCTCCTCTTACA
TCTCCAACCCGAAACATACTAGAATTTACTTCTGATTGGAGCATAGACCT
AAATGAGAGTGACTTAGTCCACCTTAGGGAACTAACGCAGTCCTTGACTG
CGGCTGCGACTGGTTTGGCTTCCAACTCCCCAGGAGCCTGTCTTCGTTCT
CAGGTAGCACATCGCAACGGTAGCGAGAGTCTAGATGTACCACAATCTTG
CCGAGGTAGACTCCTTGCCTTTCTATTCAACAAATTCAAACAACCTCAAA
CCAAAGAACTACTGGCAGCGTTCGTATATTCATCGGTGCTCAACAGGACG
A
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Coding sequence (CDS) from alignment at KZ851902.1:1177704..1178754-

>M747DRAFT_118187-T1 ID=M747DRAFT_118187-T1|Name=M747DRAFT_118187-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2148bp|location=Sequence derived from alignment at KZ851902.1:1177704..1178754- (Aspergillus niger ATCC 13496)
ACCTAAAGATCTTCTTCAGCGCCACAAAACCATTCATGAAGCCAGAGGAG
GGCTTCCTAGGAAGTTAGACCGCCAAGGGCGGACATCGCGTGCATGTCTG
GCTTGCGGTATGGCCAAGCTGAAGTGCAACGAGAGCAAACCATGTAGTCG
ATGTCTTTCTCGGCAGATTCCCTGCAAATCCCTTCCAGATCGACGACGTC
AGCCGCGTCCAAAGAATACGACCTTGTCCCCTTGCTTGTCCAACAGAACT
GCAATACCTCTCAGGCGTTCAGCAGATGTGGCATGGGCTCAGTCAACTCG
GGATCCATGTCTTACCAACCGACAGCTGGATGATTATCCTCCCTCGATTC
CTGGGTTCCGAGAACAGATCTATTATCTAATCCATATCAATGTGACATAT
GCCATCGGGGATTTTCTAGGCGATGGACAAAAACACAGAGATATCAGTGA
ATATACATGACAAACGTGAATTTGCTTGTTCACAGTGTCCCCGCAGCTAT
TCTCGCATTGATCATCTTTCGCGCCATGCACGTTCACACCTAAAGATCTT
CTTCAGCGCCACAAAACCATTCATGAAGCCAGAGGAGGGCTTCCTAGGAA
GTTAGACCGCCAAGGGCGGACATCGCGTGCATGTCTGGCTTGCGGTATGG
CCAAGCTGAAGTGCAACGAGAGCAAACCATGTAGTCGATGTCTTTCTCGG
CAGATTCCCTGCAAATCCCTTCCAGATCGACGACGTCAGCCGCGTCCAAA
GAATACGACCTTGTCCCCTTGCTTGTCCAACAGAACTGCAATACCTCTCA
GGCGTTCAGCAGATGTGGCATGGGCTCAGTCAACTCGGGATCCATGTCTT
ACCAACCGACAGCTGGATGATTATCCTCCCTCGATTCCTGGGTTCCGAGA
ACAGATCTATTATCTAATCCATATCAATGTGACATATGCCATCGGGGATT
TTCTAGGCGATGGACAAAAACACAGAGATATCAGTGAATATACATGACAA
ACGTGAATTTGCTTGTTCACAGTGTCCCCGCAGCTATTCTCGCATTGATC
ATCTTTCGCGCCATGCACGTTCACACCTAAAGATCTTCTTCAGCGCCACA
AAACCATTCATGAAGCCAGAGGAGGGCTTCCTAGGAAGTTAGACCGCCAA
GGGCGGACATCGCGTGCATGTCTGGCTTGCGGTATGGCCAAGCTGAAGTG
CAACGAGAGCAAACCATGTAGTCGATGTCTTTCTCGGCAGATTCCCTGCA
AATCCCTTCCAGATCGACGACGTCAGCCGCGTCCAAAGAATACGACCTTG
TCCCCTTGCTTGTCCAACAGAACTGCAATACCTCTCAGGCGTTCAGCAGA
TGTGGCATGGGCTCAGTCAACTCGGGATCCATGTCTTACCAACCGACAGC
TGGATGATTATCCTCCCTCGATTCCTGGGTTCCGAGAACAGATCTATTAT
CTAATCCATATCAATGTGACATATGCCATCGGGGATTTTCTAGGCGATGG
ACAAAAACACAGAGATATCAGTGAATATACATGACAAACGTGAATTTGCT
TGTTCACAGTGTCCCCGCAGCTATTCTCGCATTGATCATCTTTCGCGCCA
TGCACGTTCACACCTAAAGATCTTCTTCAGCGCCACAAAACCATTCATGA
AGCCAGAGGAGGGCTTCCTAGGAAGTTAGACCGCCAAGGGCGGACATCGC
GTGCATGTCTGGCTTGCGGTATGGCCAAGCTGAAGTGCAACGAGAGCAAA
CCATGTAGTCGATGTCTTTCTCGGCAGATTCCCTGCAAATCCCTTCCAGA
TCGACGACGTCAGCCGCGTCCAAAGAATACGACCTTGTCCCCTTGCTTGT
CCAACAGAACTGCAATACCTCTCAGGCGTTCAGCAGATGTGGCATGGGCT
CAGTCAACTCGGGATCCATGTCTTACCAACCGACAGCTGGATGATTATCC
TCCCTCGATTCCTGGGTTCCGAGAACAGATCTATTATCTAATCCATATCA
ATGTGACATATGCCATCGGGGATTTTCTAGGCGATGGACAAAAACACAGA
GATATCAGTGAATATACATGACAAACGTGAATTTGCTTGTTCACAGTGTC
CCCGCAGCTATTCTCGCATTGATCATCTTTCGCGCCATGCACGTTCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_118187M747DRAFT_118187Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_118187-T1M747DRAFT_118187-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_118187-T1.cdsM747DRAFT_118187-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_118187-T1.utr3p1M747DRAFT_118187-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_118187-T1.exon4M747DRAFT_118187-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_118187-T1.exon3M747DRAFT_118187-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_118187-T1.exon2M747DRAFT_118187-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_118187-T1.exon1M747DRAFT_118187-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_118187-T1.utr5p1M747DRAFT_118187-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF13894
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851902.1supercontigKZ851902.1:1177704..1178754 -
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