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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851938.1:114389..116422- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_118514-T1 ID=M747DRAFT_118514-T1|Name=M747DRAFT_118514-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2034bp|location=Sequence derived from alignment at KZ851938.1:114389..116422- (Aspergillus niger ATCC 13496)
CGTTGTGATTAGGCTCTGAGTGGGGGCCGAATGACAGCCTTGTCTGGTCG
GACCTCCTATTTAATCCATTTATTGATGAAGGATTGCAGATACCCATCCT
GTCGCAACACCATCGCTGCTTTTGGCACCCCCCCACTCTCAATATGGTCA
ATCGCGGACCCTCTGGAGGATGTGTTACATGCAAAACACGACGTGTCAAA
TGTGACGAGGCGAAGCCCGAATGCCACGCGTGTCAACGCCTCAACCTTCG
TTGCGGGGGCTACAAGCCAAAGCCTGTCAAGATTAGGTTCAGGGATCAAA
CCGCCAAGGTTTGCAACGACCTTGTTTCGAAGCAAGCCGCTCAGAATCAA
CAATGGGTGCCTTGCTTGCGATCGCTAGCCGAACCCGACCCTGCTGTCCC
ATTCTTCATTCGACATTACGGCGTCATGGGTCGCAATGCGAAGTCTGCCC
GTGGGTTTTTCGAGATATTAGCTCCAGTATACGCTACTCAGCAGCAGAAC
TCGCCTCTCTCGCTCGCGGTGACTGCCGTGGCTTCGGAAATCCTGTCGCG
TTGGCGGCACGAGAGTAGCTCCCGAGCATCTTGGGAGACCTATACCCAGG
CCATCAAGCGTCTTCGGGAGACTCTCCAGGATCGCAATGAATTGACAAAC
CCGGCAACAATGTTAGCCGTGTTGGCGCTGCAATTTTATGAAAATTTCGC
TGTTATATACGGCAGTCACCAAGCCACGGGAGTACACCACGAGGGAGCCG
TCTCCTTGCTCCCACTCACAGATCAGGATCATGCCAGTGGGTCGCTGATC
GCACACATTCGGCGATGTATCCTTCACAATGAGATTTTATCAGCGATACG
TCATAAACGGCTTCTGCATAGCACGGCCCACTCGCGTCTTGGGTGCATAG
AGCCGACAATTGCGCCAGGTAATTTAGGCCCCGCACTCGATGCAATAGGC
GTATCCGTGGCCGAGTTGAATGCAAGTTATTGGCAGCAAGCAGCCCACGT
AGGTTCCATGTCTTCGACAAAAATCTGCAGAGACTGGAGAGCCGAGGCAA
AGTGTATTGACGAACGACTCCTTGCTTGGGCACAAAACGTCCCGCAACAT
TTGCAGCCGGTGAGACTCCCGGATGGAATCGCTCTCGACCCTTCGATCCC
AACTTACAATTCTATGTGCGACGTCTACATTTCGTGCCAGATTGGATCAC
TGTGGAACGAATGGCGCGCTCAACGCCTCTTGCTCGTCAAGATAATCCTC
AGCTCGCTTAGTACCATTCCCACCGCTGGCCATCTTGCGCAATCAAATGC
TGAAACCGAAGAGTTCGCCGAGTATAAGCACCTTCTTCAAGAGCTGGTCG
ATTCGGTCTGTTACAGCGTGCCCTATTATCTTGGGAACCAAGGCGGATGG
TTAAGTATTCCCGACTTAACCGATCCAGCAATTGTGTTTCCTAGCCATCG
CTTACTAGACAATGTCAACCAGCAAAAGTCTGCGCAGAAGTCAGAAGACG
AGCACAGTAGTCATATTATCGCCCAAGGGCCGTGGCACGTCATGAGTGTG
TTGAGTCGCGTGGTGGCATTCTTCATCGAGGACCATGGTCAGGGGATGGT
GTCTTTTCTCCGACCTGGACAGCTCGAGTGGATCCGGGAGCAGTTCCTGC
GTGTCACGCAGCTACTCCGTATTCCGTTGGAGGAGGCCAGTGATGGTAAA
GCGAGATTCTATCCGTTGGACCGGTCTTTACAAGCAGATCTAGATGCCAA
AATTGACAATCTCGCAAAGCGGATCAGGAAGGGCGCGTTTATATGACTGT
TCTTCTTTGGGACTTGGTCTGACAATTCATATCTCCAATGTTAGTTGGGG
GATGCAAGATTGGGAGAGGACGGAAATGAGGTTTATGATGATGCTAATAG
TACATTGATGATAGCTACGTTAATCTTCTGCAGTTGGAGGTAAATGTACC
ACATCCCCTGAAAGTAAGCAGCAACCTGAGGCCGAAACCATCAGCCTCGC
CGCCAAGCCCGAATCTGCCTGCAGCACAGCCTCG back to topCoding sequence (CDS) from alignment at KZ851938.1:114389..116422- >M747DRAFT_118514-T1 ID=M747DRAFT_118514-T1|Name=M747DRAFT_118514-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1653bp|location=Sequence derived from alignment at KZ851938.1:114389..116422- (Aspergillus niger ATCC 13496)
ATGGTCAATCGCGGACCCTCTGGAGGATGTGTTACATGCAAAACACGACG
TGTCAAATGTGACGAGGCGAAGCCCGAATGCCACGCGTGTCAACGCCTCA
ACCTTCGTTGCGGGGGCTACAAGCCAAAGCCTGTCAAGATTAGGTTCAGG
GATCAAACCGCCAAGGTTTGCAACGACCTTGTTTCGAAGCAAGCCGCTCA
GAATCAACAATGGGTGCCTTGCTTGCGATCGCTAGCCGAACCCGACCCTG
CTGTCCCATTCTTCATTCGACATTACGGCGTCATGGGTCGCAATGCGAAG
TCTGCCCGTGGGTTTTTCGAGATATTAGCTCCAGTATACGCTACTCAGCA
GCAGAACTCGCCTCTCTCGCTCGCGGTGACTGCCGTGGCTTCGGAAATCC
TGTCGCGTTGGCGGCACGAGAGTAGCTCCCGAGCATCTTGGGAGACCTAT
ACCCAGGCCATCAAGCGTCTTCGGGAGACTCTCCAGGATCGCAATGAATT
GACAAACCCGGCAACAATGTTAGCCGTGTTGGCGCTGCAATTTTATGAAA
ATTTCGCTGTTATATACGGCAGTCACCAAGCCACGGGAGTACACCACGAG
GGAGCCGTCTCCTTGCTCCCACTCACAGATCAGGATCATGCCAGTGGGTC
GCTGATCGCACACATTCGGCGATGTATCCTTCACAATGAGATTTTATCAG
CGATACGTCATAAACGGCTTCTGCATAGCACGGCCCACTCGCGTCTTGGG
TGCATAGAGCCGACAATTGCGCCAGGTAATTTAGGCCCCGCACTCGATGC
AATAGGCGTATCCGTGGCCGAGTTGAATGCAAGTTATTGGCAGCAAGCAG
CCCACGTAGGTTCCATGTCTTCGACAAAAATCTGCAGAGACTGGAGAGCC
GAGGCAAAGTGTATTGACGAACGACTCCTTGCTTGGGCACAAAACGTCCC
GCAACATTTGCAGCCGGTGAGACTCCCGGATGGAATCGCTCTCGACCCTT
CGATCCCAACTTACAATTCTATGTGCGACGTCTACATTTCGTGCCAGATT
GGATCACTGTGGAACGAATGGCGCGCTCAACGCCTCTTGCTCGTCAAGAT
AATCCTCAGCTCGCTTAGTACCATTCCCACCGCTGGCCATCTTGCGCAAT
CAAATGCTGAAACCGAAGAGTTCGCCGAGTATAAGCACCTTCTTCAAGAG
CTGGTCGATTCGGTCTGTTACAGCGTGCCCTATTATCTTGGGAACCAAGG
CGGATGGTTAAGTATTCCCGACTTAACCGATCCAGCAATTGTGTTTCCTA
GCCATCGCTTACTAGACAATGTCAACCAGCAAAAGTCTGCGCAGAAGTCA
GAAGACGAGCACAGTAGTCATATTATCGCCCAAGGGCCGTGGCACGTCAT
GAGTGTGTTGAGTCGCGTGGTGGCATTCTTCATCGAGGACCATGGTCAGG
GGATGGTGTCTTTTCTCCGACCTGGACAGCTCGAGTGGATCCGGGAGCAG
TTCCTGCGTGTCACGCAGCTACTCCGTATTCCGTTGGAGGAGGCCAGTGA
TGGTAAAGCGAGATTCTATCCGTTGGACCGGTCTTTACAAGCAGATCTAG
ATGCCAAAATTGACAATCTCGCAAAGCGGATCAGGAAGGGCGCGTTTATA
TGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851938.1 | supercontig | KZ851938.1:114389..116422 - |
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