|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851944.1:8049..10606- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_125747-T1 ID=M747DRAFT_125747-T1|Name=M747DRAFT_125747-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2558bp|location=Sequence derived from alignment at KZ851944.1:8049..10606- (Aspergillus niger ATCC 13496)
GTTCTTCCCATCAAATTAATCCATCCATCCTCCTCCGACCACTTCCCCCA
CTCAATAATTCCTCCCCCCGGTATGGCCTGCGGTTCGAGCCGCCTTCCCT
GGCCTCTTTCTCCGTCCCTTCCACCACCATGACCAACCGTGACCCCGAAT
TTCGGCATCAGCTGGGCAAATTCCGACTCGATCCCCTACCGATTCCTTCC
CATCCTGCATCTCTGCCTCCTCCGCCGCGTCCTGCTCACCCCAGTTCCGT
CCCTTCTCCGCAGTCGCTGCCGCCGCCCTCCGTGCCGCTTCAGCAGCAAC
AGCCACTCCCAACAGCACCACCGTCGCTCCAACAGTCTCAGCAGCAGCCT
CAACCAACCCCTGCCTCATCGCGATCCTCCCCATCACATACCCCTCACCC
TCGCAGTAAACGAGTATCCACAGCGTGCGATTTCTGTCGGAAACGGAAAA
AGAAATGTGACTTTCGATACCCCAACTGCTCCGCGTGTACTCGCGCCGGT
GTCCGCTGTACCATCCCTCCGCCGGGTCCCCAGGTCGCCGCGGCGTCTGT
TCCTCGAGATCAGTTAGAAAATCTACAAAACCGGGTGAAATGGCTGGAGG
ATCTTTTGCGCCGCAAGACAGGCATCTCTGTTGGCGACCGGCCCACGGGG
ACTGCGCTGGATGGCGAGGGCGATCCGGACTGGTGGTACCAGGTCCCAGC
CTTGCTGATGACTCGCGGGAGTTCAACACATTCAACCCCCACGACGACTG
CAACCGCGCTGTCCAGCAGCCCTGCTCCTAGTTCCACCGCGGTAGGTACC
GAGCTGCCTAACGTAGGCGAATTGTTTCGCGACCAGTTGGAGCATCGACG
ACCCTCCATCGCGCGTCCGGTAGCATCCGCTCCGCGCGTGATCCGGCTCG
CCTCGCTGCCAGAGGCGAAATCAGTGGCATTGCGATACTTTGATAGTTTG
GGGTACCAATATCCTTTTCTCCATCGCGAGGAGTTCATGGCCCATCTCGA
TCGCATCTATGCGGGGGAGGTCCCCGCACCAGAGGTTCATCACTCGTATC
ACATCACCATCGCAACGGCCTTGTTGATCGGATCTGCCGACGAGTCACAG
GCTGCCGAGTTCTATCATGTTAGCAATGAGACAATGACCTTGGCTTTGCA
GAATGAAGATCTGGCTGCTGTTCGAGCCCTTCTGAGCGTCGCTGTGTATA
CAATGTTTGCGACCACGGGCCCCAGCGTATGGCACATCCTCGGGACTACT
TTGCGTCTCGCCACCAGTCTCGGGCTGCATAAAGCCCGTCCAACGGGGAA
CGTGATAGAAGAGGAGATGGCCAAGCGGGCGTTCTGGAGTCTCTACAACC
TCGATCGACTGATCGCAAGCACCCTTGGAAGGCCACTTGGAATTGCAGAC
GAGGATATCTCAATAGGCTTGCCGCGGGAATTCAACGACAACTGGACAGA
GACACCCGGAGCTAGTGCTATGACCATTCCATTGCAGGTGGTGCGCCTGC
GCCGGATATTCTCGCGCATCTACCGCTACTGTAAGTCTCTTCGAGTTTGC
CCCCGGTGCTCACTGAGGTCTAGTCCCACTGACTGTGACAGTATTCAACA
ACCAACCGCCACCTCCTCCAACAGAGGTTGCCATCACGCTCAGTCATTTC
CGCCAGGAACTAGACGACTGGCGACAGGAAGCACCGGTGTATGCGCCCGC
GCTTCTGTACTCGACTAGCTACTACGACTATCTATACGCAACGACACTGC
TCCTTATGTACCGGCCTAGTCCGCGTAATCCGACACCTGATGCAACGAGC
ATCGTGAGCTGTGGCAATGCCAGCATTCAGGTCATTCGGTCCTACTGGGA
CAGCTATTCGCAGGGCAAGCTCAAGTGGATCTGGTTGACCCTCAGCCAGG
TTTACTTTGCCGGCATCACAATCCTGTGGTGTCTTAACCATAATCTTCAG
TCTGTCCGTGAAGGCCGTGGTGCTGCGTGGAAGCCTGAGGATCAGAGCAT
GCGACGGGCCATCCAGGCAGTAGTTGTTCTGCTGGAGGAATTTGGCAAGA
GACGTCCGGGAGTGGACCGACTGGCGGAGACGTTTCGGAACCAGAGCACG
ATGATCTTCAGCCATCTGGCATACCAGCAGGAGCAGGAGCAGCAGCAGCA
GCAGCTTCAACAACAACAACAGCCACAACCACTCCCGCCTCCACCGCAGC
CACAGCCACAGCCACCAATACCACACCATCAAACGCTCTTGGAACAGCAG
CCGCAGCAACAACCACAACAGCAGCAGCAGCAGCAACAGCAACAACACAT
TTTGGTAGCACCGCCGGTGCCCCTAGCGCCGGTGCTGGATGACGTTCTCC
TGGTCAATGGATCGGGGAACGTGCCCATGATTGATCCACAACTGGCGGAG
CAATTATTCTATTCCTATGACTGGTTTCAGGAGGAGATGGCGACATACTA
TACCCTTTAATTGGATTATATTAGAACAAGTTTGGAATAATCCTCTGTCT
TTTGAGCTTACGGCTGTTGTGTAGTAATTCTGGAAGAGGCGCCTTGCTAC
CCCGCTGT back to topCoding sequence (CDS) from alignment at KZ851944.1:8049..10606- >M747DRAFT_125747-T1 ID=M747DRAFT_125747-T1|Name=M747DRAFT_125747-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4542bp|location=Sequence derived from alignment at KZ851944.1:8049..10606- (Aspergillus niger ATCC 13496)
TATTCAACAACCAACCGCCACCTCCTCCAACAGAGGTTGCCATCACGCTC
AGTCATTTCCGCCAGGAACTAGACGACTGGCGACAGGAAGCACCGGTGTA
TGCGCCCGCGCTTCTGTACTCGACTAGCTACTACGACTATCTATACGCAA
CGACACTGCTCCTTATGTACCGGCCTAGTCCGCGTAATCCGACACCTGAT
GCAACGAGCATCGTGAGCTGTGGCAATGCCAGCATTCAGGTCATTCGGTC
CTACTGGGACAGCTATTCGCAGGGCAAGCTCAAGTGGATCTGGTTGACCC
TCAGCCAGGTTTACTTTGCCGGCATCACAATCCTGTGGTGTCTTAACCAT
AATCTTCAGTCTGTCCGTGAAGGCCGTGGTGCTGCGTGGAAGCCTGAGGA
TCAGAGCATGCGACGGGCCATCCAGGCAGTAGTTGTTCTGCTGGAGGAAT
TTGGCAAGAGACGTCCGGGAGTGGACCGACTGGCGGAGACGTTTCGGAAC
CAGAGCACGATGATCTTCAGCCATCTGGCATACCAGCAGGAGCAGGAGCA
GCAGCAGCAGCAGCTTCAACAACAACAACAGCCACAACCACTCCCGCCTC
CACCGCAGCCACAGCCACAGCCACCAATACCACACCATCAAACGCTCTTG
GAACAGCAGCCGCAGCAACAACCACAACAGCAGCAGCAGCAGCAACAGCA
ACAACACATTTTGGTAGCACCGCCGGTGCCCCTAGCGCCGGTGCTGGATG
ACGTTCTCCTGGTCAATGGATCGGGGAACGTGCCCATGATTGATCCACAA
CTGGCGGAGCAATTATTCTATTCCTATGACTGGTTTCAGGAGGAGATGGC
GACATACTATACCCTTTAAATGACCAACCGTGACCCCGAATTTCGGCATC
AGCTGGGCAAATTCCGACTCGATCCCCTACCGATTCCTTCCCATCCTGCA
TCTCTGCCTCCTCCGCCGCGTCCTGCTCACCCCAGTTCCGTCCCTTCTCC
GCAGTCGCTGCCGCCGCCCTCCGTGCCGCTTCAGCAGCAACAGCCACTCC
CAACAGCACCACCGTCGCTCCAACAGTCTCAGCAGCAGCCTCAACCAACC
CCTGCCTCATCGCGATCCTCCCCATCACATACCCCTCACCCTCGCAGTAA
ACGAGTATCCACAGCGTGCGATTTCTGTCGGAAACGGAAAAAGAAATGTG
ACTTTCGATACCCCAACTGCTCCGCGTGTACTCGCGCCGGTGTCCGCTGT
ACCATCCCTCCGCCGGGTCCCCAGGTCGCCGCGGCGTCTGTTCCTCGAGA
TCAGTTAGAAAATCTACAAAACCGGGTGAAATGGCTGGAGGATCTTTTGC
GCCGCAAGACAGGCATCTCTGTTGGCGACCGGCCCACGGGGACTGCGCTG
GATGGCGAGGGCGATCCGGACTGGTGGTACCAGGTCCCAGCCTTGCTGAT
GACTCGCGGGAGTTCAACACATTCAACCCCCACGACGACTGCAACCGCGC
TGTCCAGCAGCCCTGCTCCTAGTTCCACCGCGGTAGGTACCGAGCTGCCT
AACGTAGGCGAATTGTTTCGCGACCAGTTGGAGCATCGACGACCCTCCAT
CGCGCGTCCGGTAGCATCCGCTCCGCGCGTGATCCGGCTCGCCTCGCTGC
CAGAGGCGAAATCAGTGGCATTGCGATACTTTGATAGTTTGGGGTACCAA
TATCCTTTTCTCCATCGCGAGGAGTTCATGGCCCATCTCGATCGCATCTA
TGCGGGGGAGGTCCCCGCACCAGAGGTTCATCACTCGTATCACATCACCA
TCGCAACGGCCTTGTTGATCGGATCTGCCGACGAGTCACAGGCTGCCGAG
TTCTATCATGTTAGCAATGAGACAATGACCTTGGCTTTGCAGAATGAAGA
TCTGGCTGCTGTTCGAGCCCTTCTGAGCGTCGCTGTGTATACAATGTTTG
CGACCACGGGCCCCAGCGTATGGCACATCCTCGGGACTACTTTGCGTCTC
GCCACCAGTCTCGGGCTGCATAAAGCCCGTCCAACGGGGAACGTGATAGA
AGAGGAGATGGCCAAGCGGGCGTTCTGGAGTCTCTACAACCTCGATCGAC
TGATCGCAAGCACCCTTGGAAGGCCACTTGGAATTGCAGACGAGGATATC
TCAATAGGCTTGCCGCGGGAATTCAACGACAACTGGACAGAGACACCCGG
AGCTAGTGCTATGACCATTCCATTGCAGGTGGTGCGCCTGCGCCGGATAT
TCTCGCGCATCTACCGCTACTTATTCAACAACCAACCGCCACCTCCTCCA
ACAGAGGTTGCCATCACGCTCAGTCATTTCCGCCAGGAACTAGACGACTG
GCGACAGGAAGCACCGGTGTATGCGCCCGCGCTTCTGTACTCGACTAGCT
ACTACGACTATCTATACGCAACGACACTGCTCCTTATGTACCGGCCTAGT
CCGCGTAATCCGACACCTGATGCAACGAGCATCGTGAGCTGTGGCAATGC
CAGCATTCAGGTCATTCGGTCCTACTGGGACAGCTATTCGCAGGGCAAGC
TCAAGTGGATCTGGTTGACCCTCAGCCAGGTTTACTTTGCCGGCATCACA
ATCCTGTGGTGTCTTAACCATAATCTTCAGTCTGTCCGTGAAGGCCGTGG
TGCTGCGTGGAAGCCTGAGGATCAGAGCATGCGACGGGCCATCCAGGCAG
TAGTTGTTCTGCTGGAGGAATTTGGCAAGAGACGTCCGGGAGTGGACCGA
CTGGCGGAGACGTTTCGGAACCAGAGCACGATGATCTTCAGCCATCTGGC
ATACCAGCAGGAGCAGGAGCAGCAGCAGCAGCAGCTTCAACAACAACAAC
AGCCACAACCACTCCCGCCTCCACCGCAGCCACAGCCACAGCCACCAATA
CCACACCATCAAACGCTCTTGGAACAGCAGCCGCAGCAACAACCACAACA
GCAGCAGCAGCAGCAACAGCAACAACACATTTTGGTAGCACCGCCGGTGC
CCCTAGCGCCGGTGCTGGATGACGTTCTCCTGGTCAATGGATCGGGGAAC
GTGCCCATGATTGATCCACAACTGGCGGAGCAATTATTCTATTCCTATGA
CTGGTTTCAGGAGGAGATGGCGACATACTATACCCTTTAAATGACCAACC
GTGACCCCGAATTTCGGCATCAGCTGGGCAAATTCCGACTCGATCCCCTA
CCGATTCCTTCCCATCCTGCATCTCTGCCTCCTCCGCCGCGTCCTGCTCA
CCCCAGTTCCGTCCCTTCTCCGCAGTCGCTGCCGCCGCCCTCCGTGCCGC
TTCAGCAGCAACAGCCACTCCCAACAGCACCACCGTCGCTCCAACAGTCT
CAGCAGCAGCCTCAACCAACCCCTGCCTCATCGCGATCCTCCCCATCACA
TACCCCTCACCCTCGCAGTAAACGAGTATCCACAGCGTGCGATTTCTGTC
GGAAACGGAAAAAGAAATGTGACTTTCGATACCCCAACTGCTCCGCGTGT
ACTCGCGCCGGTGTCCGCTGTACCATCCCTCCGCCGGGTCCCCAGGTCGC
CGCGGCGTCTGTTCCTCGAGATCAGTTAGAAAATCTACAAAACCGGGTGA
AATGGCTGGAGGATCTTTTGCGCCGCAAGACAGGCATCTCTGTTGGCGAC
CGGCCCACGGGGACTGCGCTGGATGGCGAGGGCGATCCGGACTGGTGGTA
CCAGGTCCCAGCCTTGCTGATGACTCGCGGGAGTTCAACACATTCAACCC
CCACGACGACTGCAACCGCGCTGTCCAGCAGCCCTGCTCCTAGTTCCACC
GCGGTAGGTACCGAGCTGCCTAACGTAGGCGAATTGTTTCGCGACCAGTT
GGAGCATCGACGACCCTCCATCGCGCGTCCGGTAGCATCCGCTCCGCGCG
TGATCCGGCTCGCCTCGCTGCCAGAGGCGAAATCAGTGGCATTGCGATAC
TTTGATAGTTTGGGGTACCAATATCCTTTTCTCCATCGCGAGGAGTTCAT
GGCCCATCTCGATCGCATCTATGCGGGGGAGGTCCCCGCACCAGAGGTTC
ATCACTCGTATCACATCACCATCGCAACGGCCTTGTTGATCGGATCTGCC
GACGAGTCACAGGCTGCCGAGTTCTATCATGTTAGCAATGAGACAATGAC
CTTGGCTTTGCAGAATGAAGATCTGGCTGCTGTTCGAGCCCTTCTGAGCG
TCGCTGTGTATACAATGTTTGCGACCACGGGCCCCAGCGTATGGCACATC
CTCGGGACTACTTTGCGTCTCGCCACCAGTCTCGGGCTGCATAAAGCCCG
TCCAACGGGGAACGTGATAGAAGAGGAGATGGCCAAGCGGGCGTTCTGGA
GTCTCTACAACCTCGATCGACTGATCGCAAGCACCCTTGGAAGGCCACTT
GGAATTGCAGACGAGGATATCTCAATAGGCTTGCCGCGGGAATTCAACGA
CAACTGGACAGAGACACCCGGAGCTAGTGCTATGACCATTCCATTGCAGG
TGGTGCGCCTGCGCCGGATATTCTCGCGCATCTACCGCTACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851944.1 | supercontig | KZ851944.1:8049..10606 - |
|
