You are here

Home

M747DRAFT_132310-T1, M747DRAFT_132310-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_132310-T1
Unique NameM747DRAFT_132310-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851903.1:160545..162193-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_132310-T1 ID=M747DRAFT_132310-T1|Name=M747DRAFT_132310-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1649bp|location=Sequence derived from alignment at KZ851903.1:160545..162193- (Aspergillus niger ATCC 13496)
CCAATGTGGGGGGTAGACATCACATATTTTGAATTTCTCTGTCTATCTGG
CAATCTTTCAGGTCCTCGTCCGACACCAGAGTCGCTCGTGTCGGTTCTCA
CAGTTCATACACCACCACCATGACCAAGATATTGACCTCCAGCCAAGCTG
AGGAACTGTGAGTATATTTATGCCATGGCCTGCCGTACCTTGCTTGCGCG
CTTATACGCAACCCAGGCATAAGTCGATAATCGCCTACCTCTCATCAATA
AATGCCTCGCGGAGTTGTGAAGTGCTGCGGGAGGAACTCCAGGTGGACAG
TAGTTTCGACGATGCGCTGTGCCGGAAATATGAGGGGCTATTAGAGAAGA
AATGGACCGGAATTGCTCGGCTGCAGAAAAAGGTAGGTACATGTGCTTGA
CAGGGTCGGTCGTTTGGAGTTGTTCTTTCCTCGTCGCTGGAGAACTCAGT
AACTAATCACCGTGTAGATCTTGGACTTAGAATCTAAACTCGCTGGGCTC
CAAACCGAGCTTGACACTATATCACCTACAGCCCGTTCCACCGGGAAGGA
CCCGATAAACTGGCTTCCTACTTCTTCCCGACACACATTCGAGTCGCACC
GAGATGCTGTCACATGCGTCGCATTCCATCCTGTCTTCACCTCTCTCGCC
TCCGGTTCCGAGGACTGCACAATCAAAATATGGGATTGGGAACTCGGCGA
ACTAGAGCGGACACTCAAGGGCCATATGAGGCCGGTCTCCGATCTCGATT
TTGGCGGTCAGAAAGGACATACCATACTAGCATCATGTTCGAGTGATCTC
CAGATCAAACTGTGGGACCCGAACAAGGATTATGCCAATGTTCGGACTCT
TTCTGGGCATGACCATTCAGTTTCGGCTGTGCGCTTTTTGCGACAGACAG
ATAACATTCTTATTTCGGCCAGTCGGGATGCGACAATTCGGATATGGGAT
GTGTCAACCGGATACTGTGTCAAGGTGATCGACTCGCAGGGCTCCTGGAT
CAACGACGTATCGCCTTCTTTCGATGGAAAGTGGCTGGTCACAGGAGGCC
GTGATCAAGCCGCGATGGTTTGGGAAGTCGCATCAGCCAAATCGGTTGCG
TCATTAATAGGCCACGAGAATTTCATCGAGTGCTGCGTATTTGCGCCTCC
CTCAAGCTATAAGCACTTGGCCGCTATTGCGGGACTAAAGACAGCACCAC
CTGCGAGTAGCTCCTCCGAATTCATTGCGACGGGAGCTCGTGACAAGACG
ATCAAGCTCTGGGAATCCCGGGGCCGATTGATCAAGACATTAGTTGGGCA
CGACAACTGGGTACGAGGCCTATTATTCCATCCTGGTGGGAAATATTTAA
TCAGTGTGGCGGACGACAAAACAATACGTTGCTGGGATCTGTCTCAAGGA
GGAAGATTGGTGAAGACGATCAACGCCCACGGGCATTTTGTTAGTTGCAT
TCGTTGGGGCCCAGTACCTGTGAGCGATGTTCCAGTGGAGACTTCTGAAT
CGACTAAAAGTTCCAAGTCGGACTCTGTCAAGCCTGGGTTTCAATGCGTC
ATTGCAACAGGGAGCGCCGATTCAAGTGTACGGATTTTCACGTAGTTTCA
GAGGTAAATGATTGCATATATCCTAACCTTTTCAAAGACTAATACCAAT
back to top

Coding sequence (CDS) from alignment at KZ851903.1:160545..162193-

>M747DRAFT_132310-T1 ID=M747DRAFT_132310-T1|Name=M747DRAFT_132310-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3996bp|location=Sequence derived from alignment at KZ851903.1:160545..162193- (Aspergillus niger ATCC 13496)
ATCTTGGACTTAGAATCTAAACTCGCTGGGCTCCAAACCGAGCTTGACAC
TATATCACCTACAGCCCGTTCCACCGGGAAGGACCCGATAAACTGGCTTC
CTACTTCTTCCCGACACACATTCGAGTCGCACCGAGATGCTGTCACATGC
GTCGCATTCCATCCTGTCTTCACCTCTCTCGCCTCCGGTTCCGAGGACTG
CACAATCAAAATATGGGATTGGGAACTCGGCGAACTAGAGCGGACACTCA
AGGGCCATATGAGGCCGGTCTCCGATCTCGATTTTGGCGGTCAGAAAGGA
CATACCATACTAGCATCATGTTCGAGTGATCTCCAGATCAAACTGTGGGA
CCCGAACAAGGATTATGCCAATGTTCGGACTCTTTCTGGGCATGACCATT
CAGTTTCGGCTGTGCGCTTTTTGCGACAGACAGATAACATTCTTATTTCG
GCCAGTCGGGATGCGACAATTCGGATATGGGATGTGTCAACCGGATACTG
TGTCAAGGTGATCGACTCGCAGGGCTCCTGGATCAACGACGTATCGCCTT
CTTTCGATGGAAAGTGGCTGGTCACAGGAGGCCGTGATCAAGCCGCGATG
GTTTGGGAAGTCGCATCAGCCAAATCGGTTGCGTCATTAATAGGCCACGA
GAATTTCATCGAGTGCTGCGTATTTGCGCCTCCCTCAAGCTATAAGCACT
TGGCCGCTATTGCGGGACTAAAGACAGCACCACCTGCGAGTAGCTCCTCC
GAATTCATTGCGACGGGAGCTCGTGACAAGACGATCAAGCTCTGGGAATC
CCGGGGCCGATTGATCAAGACATTAGTTGGGCACGACAACTGGGTACGAG
GCCTATTATTCCATCCTGGTGGGAAATATTTAATCAGTGTGGCGGACGAC
AAAACAATACGTTGCTGGGATCTGTCTCAAGGAGGAAGATTGGTGAAGAC
GATCAACGCCCACGGGCATTTTGTTAGTTGCATTCGTTGGGGCCCAGTAC
CTGTGAGCGATGTTCCAGTGGAGACTTCTGAATCGACTAAAAGTTCCAAG
TCGGACTCTGTCAAGCCTGGGTTTCAATGCGTCATTGCAACAGGGAGCGC
CGATTCAAGTGTACGGATTTTCACGTAGGCATAAGTCGATAATCGCCTAC
CTCTCATCAATAAATGCCTCGCGGAGTTGTGAAGTGCTGCGGGAGGAACT
CCAGGTGGACAGTAGTTTCGACGATGCGCTGTGCCGGAAATATGAGGGGC
TATTAGAGAAGAAATGGACCGGAATTGCTCGGCTGCAGAAAAAGATGACC
AAGATATTGACCTCCAGCCAAGCTGAGGAACTATCTTGGACTTAGAATCT
AAACTCGCTGGGCTCCAAACCGAGCTTGACACTATATCACCTACAGCCCG
TTCCACCGGGAAGGACCCGATAAACTGGCTTCCTACTTCTTCCCGACACA
CATTCGAGTCGCACCGAGATGCTGTCACATGCGTCGCATTCCATCCTGTC
TTCACCTCTCTCGCCTCCGGTTCCGAGGACTGCACAATCAAAATATGGGA
TTGGGAACTCGGCGAACTAGAGCGGACACTCAAGGGCCATATGAGGCCGG
TCTCCGATCTCGATTTTGGCGGTCAGAAAGGACATACCATACTAGCATCA
TGTTCGAGTGATCTCCAGATCAAACTGTGGGACCCGAACAAGGATTATGC
CAATGTTCGGACTCTTTCTGGGCATGACCATTCAGTTTCGGCTGTGCGCT
TTTTGCGACAGACAGATAACATTCTTATTTCGGCCAGTCGGGATGCGACA
ATTCGGATATGGGATGTGTCAACCGGATACTGTGTCAAGGTGATCGACTC
GCAGGGCTCCTGGATCAACGACGTATCGCCTTCTTTCGATGGAAAGTGGC
TGGTCACAGGAGGCCGTGATCAAGCCGCGATGGTTTGGGAAGTCGCATCA
GCCAAATCGGTTGCGTCATTAATAGGCCACGAGAATTTCATCGAGTGCTG
CGTATTTGCGCCTCCCTCAAGCTATAAGCACTTGGCCGCTATTGCGGGAC
TAAAGACAGCACCACCTGCGAGTAGCTCCTCCGAATTCATTGCGACGGGA
GCTCGTGACAAGACGATCAAGCTCTGGGAATCCCGGGGCCGATTGATCAA
GACATTAGTTGGGCACGACAACTGGGTACGAGGCCTATTATTCCATCCTG
GTGGGAAATATTTAATCAGTGTGGCGGACGACAAAACAATACGTTGCTGG
GATCTGTCTCAAGGAGGAAGATTGGTGAAGACGATCAACGCCCACGGGCA
TTTTGTTAGTTGCATTCGTTGGGGCCCAGTACCTGTGAGCGATGTTCCAG
TGGAGACTTCTGAATCGACTAAAAGTTCCAAGTCGGACTCTGTCAAGCCT
GGGTTTCAATGCGTCATTGCAACAGGGAGCGCCGATTCAAGTGTACGGAT
TTTCACGTAGGCATAAGTCGATAATCGCCTACCTCTCATCAATAAATGCC
TCGCGGAGTTGTGAAGTGCTGCGGGAGGAACTCCAGGTGGACAGTAGTTT
CGACGATGCGCTGTGCCGGAAATATGAGGGGCTATTAGAGAAGAAATGGA
CCGGAATTGCTCGGCTGCAGAAAAAGATGACCAAGATATTGACCTCCAGC
CAAGCTGAGGAACTATCTTGGACTTAGAATCTAAACTCGCTGGGCTCCAA
ACCGAGCTTGACACTATATCACCTACAGCCCGTTCCACCGGGAAGGACCC
GATAAACTGGCTTCCTACTTCTTCCCGACACACATTCGAGTCGCACCGAG
ATGCTGTCACATGCGTCGCATTCCATCCTGTCTTCACCTCTCTCGCCTCC
GGTTCCGAGGACTGCACAATCAAAATATGGGATTGGGAACTCGGCGAACT
AGAGCGGACACTCAAGGGCCATATGAGGCCGGTCTCCGATCTCGATTTTG
GCGGTCAGAAAGGACATACCATACTAGCATCATGTTCGAGTGATCTCCAG
ATCAAACTGTGGGACCCGAACAAGGATTATGCCAATGTTCGGACTCTTTC
TGGGCATGACCATTCAGTTTCGGCTGTGCGCTTTTTGCGACAGACAGATA
ACATTCTTATTTCGGCCAGTCGGGATGCGACAATTCGGATATGGGATGTG
TCAACCGGATACTGTGTCAAGGTGATCGACTCGCAGGGCTCCTGGATCAA
CGACGTATCGCCTTCTTTCGATGGAAAGTGGCTGGTCACAGGAGGCCGTG
ATCAAGCCGCGATGGTTTGGGAAGTCGCATCAGCCAAATCGGTTGCGTCA
TTAATAGGCCACGAGAATTTCATCGAGTGCTGCGTATTTGCGCCTCCCTC
AAGCTATAAGCACTTGGCCGCTATTGCGGGACTAAAGACAGCACCACCTG
CGAGTAGCTCCTCCGAATTCATTGCGACGGGAGCTCGTGACAAGACGATC
AAGCTCTGGGAATCCCGGGGCCGATTGATCAAGACATTAGTTGGGCACGA
CAACTGGGTACGAGGCCTATTATTCCATCCTGGTGGGAAATATTTAATCA
GTGTGGCGGACGACAAAACAATACGTTGCTGGGATCTGTCTCAAGGAGGA
AGATTGGTGAAGACGATCAACGCCCACGGGCATTTTGTTAGTTGCATTCG
TTGGGGCCCAGTACCTGTGAGCGATGTTCCAGTGGAGACTTCTGAATCGA
CTAAAAGTTCCAAGTCGGACTCTGTCAAGCCTGGGTTTCAATGCGTCATT
GCAACAGGGAGCGCCGATTCAAGTGTACGGATTTTCACGTAGGCATAAGT
CGATAATCGCCTACCTCTCATCAATAAATGCCTCGCGGAGTTGTGAAGTG
CTGCGGGAGGAACTCCAGGTGGACAGTAGTTTCGACGATGCGCTGTGCCG
GAAATATGAGGGGCTATTAGAGAAGAAATGGACCGGAATTGCTCGGCTGC
AGAAAAAGATGACCAAGATATTGACCTCCAGCCAAGCTGAGGAACT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_132310M747DRAFT_132310Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_132310-T1M747DRAFT_132310-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_132310-T1.cdsM747DRAFT_132310-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_132310-T1.utr3p1M747DRAFT_132310-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_132310-T1.exon3M747DRAFT_132310-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_132310-T1.exon2M747DRAFT_132310-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_132310-T1.exon1M747DRAFT_132310-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_132310-T1.utr5p1M747DRAFT_132310-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR037190
DBxrefInterPro:IPR006594
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR017252
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
Productnuclear migration protein NudF
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851903.1supercontigKZ851903.1:160545..162193 -
Powered by Drupal