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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851903.1:215139..217820+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_132931-T1 ID=M747DRAFT_132931-T1|Name=M747DRAFT_132931-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2682bp|location=Sequence derived from alignment at KZ851903.1:215139..217820+ (Aspergillus niger ATCC 13496)
CTCTGCCTGTGTTTGGACGAGCAAGGCGCGACTTTGACACTCAGCCCGAA
TTGACTTTCCTGTCTTCATAGGGCATCTTATCTCCGGGCGCAGTAAGTGT
TGGTTCGCTCTCACCTTCAGCTCATCTCGAAACCCGTCCCGACTGACTGT
TTTGTCTTTTTTTCCCACCTCCAGGGCAGCCCTGTTAATCCCCGTTGCTA
TCCACCCAACACCATGTCCAACCTCTTTTCTTTCGACTCGGCCCCTGGCG
GCGCGAACAAGGGGGGTCTTTTTGGATCTGGTGCCACGAACACTGGCTCT
AGCGCTGGCTCGGGCACACTCTTTGGAAACGTAGGTGCTCCGACGAGCGG
CACTTCTTCGCCTTCTTTGTTCGGGGGCGCAGCTGGCAGTGGAACTGGAG
CGGGTACTGGTACTTCGTCGCCTTTCAGTTTCGGAGCTCAGAGCAAGCCG
GGGGCCACCAGTCAGACACCGTTGTTCGGCAACGCATCACAGACTCCCAA
CAAGTCGACCGAAGCTGGTAGCTCAGGGCAAACAGCTACGAGCGGACTCT
TTGGCAATGCCGCAAAGCCTGCAGGGGGCCTCTTTGGCAACGCTACTTCT
ACGCCCGGTCAAACAGGAGGTTCTTTGTTCGGCAATGCCTCGTCCACAAC
GCCCGCCGGTCCTCCTCCGCAGGGCGCGACTGGCCAGACGCAGACGCTCT
TTGGACAGGCAGCACAAAAGCCTGGCGGTCTCTTCGGAAACGTGAACTCG
ACCACCTCGACTACCTCGACCACCTCATCGGCTGCCCCGTCGTCTACTAC
CGCTACAGCCCCCGCCACCACTACCCCGTCGCTGTTCGGAAACGCCAACA
CAAACACCACAACCTCTACCTCCAACACTACGCAACAGCCATCAACTGGG
GGTCTCTTCGGTGGGGCGAACACAGCGCAGAAACCTCTCTTTGGTACCAA
TCCGGCGCCTTCTACGGGAAATAGCCTGTTCGGAAACGCCAAACCGGCCG
CACCAAGCACCAATGACAGCACTCCAAACACCCTCTTTGGAAAGGCACCG
GGGGCACCGTCAACGACGACAACCCCGGCCACAGGAGGAGGAGCTGGTGC
GCAGACATCTTCTCTCTTCAAAGCCCCAGCATCTGGAGCTGATGCCACCA
AGCCAGTCTTCCCCTCTCTGGGCACTCCGTCCTCGACCCCTCAAACCTCT
ACGACGCCAGCTGCCTCGTCCGCTGCGCCACAGACTTCCTCTCTTTTCCC
AGCCCTAGGTGGAGCGTCCTCGTCCGCGACTCCATCATCAACACCCGCTC
CCTCTGGAGGCTTGTTTGGCGGTGCCCTCGGTGGCGCTAAGTCCACAGCA
ACCACCGCTCCCGCCACTACAGCTACCGCAGCTCCCGCGACACAACCTGC
GGCAGCCACCGGCGGCCTGTTCGGTAAGCCCGCGGAGACCACCCCGTCCA
CACAGCCAGCCAGCACTGCTGCTGGAGCCTCTGCTACGACGGCTGGCGAC
AAGCCCACCCTGACCGCTACCTCTGGCGCCACCTCTTCAGCTACCACCGG
TACAGCAGGCGCAACAGGCACAACCACCGCCACTGGCGGAATTGGCCTTG
GTGCCTCGACTGCTGGACCGACTCCTCCGGCGCAGTCCCGCCTGAAGAAC
AAGACCATGGATGAGATCATCACCCGGTGGGCGACTGATCTGACCAAGTA
CCAGAAGGACTTCCGCGAGCAAGCCGAGAAGGTAGCAGAATGGGATCGGA
TGCTGGTTGAGAACGGCACCAAGGTGCAGAAACTGTACGGCAGCACGGTG
GATGCTGAGCGCGCGACTCAAGAAGTCGAGCGTCAGCTGGCGTCTGTCGA
GGGCCAGCAGGAAGAGCTCAGCTCCTGGCTCGACCGGTACGAGCGTGAAG
TGGACGAGATGATTTCCAAGCAAGTCGGACCGGGTGAAACTCTGCAGGGA
CCTGACCAGGAGCGTGAACGGACGTATGTTATTCCCATCCAACAATTATC
CTTTGATCTCTCGGTATGCTAACAGGATTACTAAAACAGATACAAAATGG
CCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAGGATCTGACAAGC
ATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAGCAAGACGAACAA
GGCTGACGAGCCGGTACGTATCCCCTTCTCCCCAAGATCCTTAAAGCTTA
TGCTAATGTATACCATGAATAGATCTCGCAAATCGTCCGCATCCTCAACT
CCCACCTCGCGCAACTGCAGGTCATCGACCAAGGCACCACGGAGCTCCAG
GCCAAGGTCGACGCCGCACAGAAGGCCGGCCAGTCCCTCTCTTCGCGGTT
CGGGTATGGTCTGGGTAGCTCTAGTGTGGGCGGTAGTGCCGCAGATGATT
TCTATCGCTCTTACATGGGACGTCGCTAGAGGAGATGCAGGGAGTGTGGA
TTGGTTTTCTGTAAACAACGGTTACGGGATGGTTTTTCTTATTAACAAGG
ATTGGTTGTTAAGTCTTTTTTTTTCTACGTCTTATTCTTTTTACTGTTGT
CGTTGTTGTTTCATGCTGCTGTTGCTGTTGCTGGAGTCTTGCAATGCAAT
GCAATCAATACAAATGAAATGAGATGAAACGGGAATAATGATAATCGCCA
TGAATGTGTGTCTGGTTGTGGATATTCCGGCT back to topCoding sequence (CDS) from alignment at KZ851903.1:215139..217820+ >M747DRAFT_132931-T1 ID=M747DRAFT_132931-T1|Name=M747DRAFT_132931-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6273bp|location=Sequence derived from alignment at KZ851903.1:215139..217820+ (Aspergillus niger ATCC 13496)
ATGTCCAACCTCTTTTCTTTCGACTCGGCCCCTGGCGGCGCGAACAAGGG
GGGTCTTTTTGGATCTGGTGCCACGAACACTGGCTCTAGCGCTGGCTCGG
GCACACTCTTTGGAAACGTAGGTGCTCCGACGAGCGGCACTTCTTCGCCT
TCTTTGTTCGGGGGCGCAGCTGGCAGTGGAACTGGAGCGGGTACTGGTAC
TTCGTCGCCTTTCAGTTTCGGAGCTCAGAGCAAGCCGGGGGCCACCAGTC
AGACACCGTTGTTCGGCAACGCATCACAGACTCCCAACAAGTCGACCGAA
GCTGGTAGCTCAGGGCAAACAGCTACGAGCGGACTCTTTGGCAATGCCGC
AAAGCCTGCAGGGGGCCTCTTTGGCAACGCTACTTCTACGCCCGGTCAAA
CAGGAGGTTCTTTGTTCGGCAATGCCTCGTCCACAACGCCCGCCGGTCCT
CCTCCGCAGGGCGCGACTGGCCAGACGCAGACGCTCTTTGGACAGGCAGC
ACAAAAGCCTGGCGGTCTCTTCGGAAACGTGAACTCGACCACCTCGACTA
CCTCGACCACCTCATCGGCTGCCCCGTCGTCTACTACCGCTACAGCCCCC
GCCACCACTACCCCGTCGCTGTTCGGAAACGCCAACACAAACACCACAAC
CTCTACCTCCAACACTACGCAACAGCCATCAACTGGGGGTCTCTTCGGTG
GGGCGAACACAGCGCAGAAACCTCTCTTTGGTACCAATCCGGCGCCTTCT
ACGGGAAATAGCCTGTTCGGAAACGCCAAACCGGCCGCACCAAGCACCAA
TGACAGCACTCCAAACACCCTCTTTGGAAAGGCACCGGGGGCACCGTCAA
CGACGACAACCCCGGCCACAGGAGGAGGAGCTGGTGCGCAGACATCTTCT
CTCTTCAAAGCCCCAGCATCTGGAGCTGATGCCACCAAGCCAGTCTTCCC
CTCTCTGGGCACTCCGTCCTCGACCCCTCAAACCTCTACGACGCCAGCTG
CCTCGTCCGCTGCGCCACAGACTTCCTCTCTTTTCCCAGCCCTAGGTGGA
GCGTCCTCGTCCGCGACTCCATCATCAACACCCGCTCCCTCTGGAGGCTT
GTTTGGCGGTGCCCTCGGTGGCGCTAAGTCCACAGCAACCACCGCTCCCG
CCACTACAGCTACCGCAGCTCCCGCGACACAACCTGCGGCAGCCACCGGC
GGCCTGTTCGGTAAGCCCGCGGAGACCACCCCGTCCACACAGCCAGCCAG
CACTGCTGCTGGAGCCTCTGCTACGACGGCTGGCGACAAGCCCACCCTGA
CCGCTACCTCTGGCGCCACCTCTTCAGCTACCACCGGTACAGCAGGCGCA
ACAGGCACAACCACCGCCACTGGCGGAATTGGCCTTGGTGCCTCGACTGC
TGGACCGACTCCTCCGGCGCAGTCCCGCCTGAAGAACAAGACCATGGATG
AGATCATCACCCGGTGGGCGACTGATCTGACCAAGTACCAGAAGGACTTC
CGCGAGCAAGCCGAGAAGGTAGCAGAATGGGATCGGATGCTGGTTGAGAA
CGGCACCAAGGTGCAGAAACTGTACGGCAGCACGGTGGATGCTGAGCGCG
CGACTCAAGAAGTCGAGCGTCAGCTGGCGTCTGTCGAGGGCCAGCAGGAA
GAGCTCAGCTCCTGGCTCGACCGGTACGAGCGTGAAGTGGACGAGATGAT
TTCCAAGCAAGTCGGACCGGGTGAAACTCTGCAGGGACCTGACCAGGAGC
GTGAACGGACATACAAAATGGCCGAGAAGCTCTCCGAGCGCCTGGACGAA
ATGGGCAAGGATCTGACAAGCATGATTGAGGAAGTCAACGGCGCGTCCTC
GACTCTCAGCAAGACGAACAAGGCTGACGAGCCGATCTCGCAAATCGTCC
GCATCCTCAACTCCCACCTCGCGCAACTGCAGGTCATCGACCAAGGCACC
ACGGAGCTCCAGGCCAAGGTCGACGCCGCACAGAAGGCCGGCCAGTCCCT
CTCTTCGCGGTTCGGGTATGGTCTGGGTAGCTCTAGTGTGGGCGGTAGTG
CCGCAGATGATTTCTATCGCTCTTACATGGGACGTCGCTAGATGTCCAAC
CTCTTTTCTTTCGACTCGGCCCCTGGCGGCGCGAACAAGGGGGGTCTTTT
TGGATCTGGTGCCACGAACACTGGCTCTAGCGCTGGCTCGGGCACACTCT
TTGGAAACGTAGGTGCTCCGACGAGCGGCACTTCTTCGCCTTCTTTGTTC
GGGGGCGCAGCTGGCAGTGGAACTGGAGCGGGTACTGGTACTTCGTCGCC
TTTCAGTTTCGGAGCTCAGAGCAAGCCGGGGGCCACCAGTCAGACACCGT
TGTTCGGCAACGCATCACAGACTCCCAACAAGTCGACCGAAGCTGGTAGC
TCAGGGCAAACAGCTACGAGCGGACTCTTTGGCAATGCCGCAAAGCCTGC
AGGGGGCCTCTTTGGCAACGCTACTTCTACGCCCGGTCAAACAGGAGGTT
CTTTGTTCGGCAATGCCTCGTCCACAACGCCCGCCGGTCCTCCTCCGCAG
GGCGCGACTGGCCAGACGCAGACGCTCTTTGGACAGGCAGCACAAAAGCC
TGGCGGTCTCTTCGGAAACGTGAACTCGACCACCTCGACTACCTCGACCA
CCTCATCGGCTGCCCCGTCGTCTACTACCGCTACAGCCCCCGCCACCACT
ACCCCGTCGCTGTTCGGAAACGCCAACACAAACACCACAACCTCTACCTC
CAACACTACGCAACAGCCATCAACTGGGGGTCTCTTCGGTGGGGCGAACA
CAGCGCAGAAACCTCTCTTTGGTACCAATCCGGCGCCTTCTACGGGAAAT
AGCCTGTTCGGAAACGCCAAACCGGCCGCACCAAGCACCAATGACAGCAC
TCCAAACACCCTCTTTGGAAAGGCACCGGGGGCACCGTCAACGACGACAA
CCCCGGCCACAGGAGGAGGAGCTGGTGCGCAGACATCTTCTCTCTTCAAA
GCCCCAGCATCTGGAGCTGATGCCACCAAGCCAGTCTTCCCCTCTCTGGG
CACTCCGTCCTCGACCCCTCAAACCTCTACGACGCCAGCTGCCTCGTCCG
CTGCGCCACAGACTTCCTCTCTTTTCCCAGCCCTAGGTGGAGCGTCCTCG
TCCGCGACTCCATCATCAACACCCGCTCCCTCTGGAGGCTTGTTTGGCGG
TGCCCTCGGTGGCGCTAAGTCCACAGCAACCACCGCTCCCGCCACTACAG
CTACCGCAGCTCCCGCGACACAACCTGCGGCAGCCACCGGCGGCCTGTTC
GGTAAGCCCGCGGAGACCACCCCGTCCACACAGCCAGCCAGCACTGCTGC
TGGAGCCTCTGCTACGACGGCTGGCGACAAGCCCACCCTGACCGCTACCT
CTGGCGCCACCTCTTCAGCTACCACCGGTACAGCAGGCGCAACAGGCACA
ACCACCGCCACTGGCGGAATTGGCCTTGGTGCCTCGACTGCTGGACCGAC
TCCTCCGGCGCAGTCCCGCCTGAAGAACAAGACCATGGATGAGATCATCA
CCCGGTGGGCGACTGATCTGACCAAGTACCAGAAGGACTTCCGCGAGCAA
GCCGAGAAGGTAGCAGAATGGGATCGGATGCTGGTTGAGAACGGCACCAA
GGTGCAGAAACTGTACGGCAGCACGGTGGATGCTGAGCGCGCGACTCAAG
AAGTCGAGCGTCAGCTGGCGTCTGTCGAGGGCCAGCAGGAAGAGCTCAGC
TCCTGGCTCGACCGGTACGAGCGTGAAGTGGACGAGATGATTTCCAAGCA
AGTCGGACCGGGTGAAACTCTGCAGGGACCTGACCAGGAGCGTGAACGGA
CATACAAAATGGCCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAG
GATCTGACAAGCATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAG
CAAGACGAACAAGGCTGACGAGCCGATCTCGCAAATCGTCCGCATCCTCA
ACTCCCACCTCGCGCAACTGCAGGTCATCGACCAAGGCACCACGGAGCTC
CAGGCCAAGGTCGACGCCGCACAGAAGGCCGGCCAGTCCCTCTCTTCGCG
GTTCGGGTATGGTCTGGGTAGCTCTAGTGTGGGCGGTAGTGCCGCAGATG
ATTTCTATCGCTCTTACATGGGACGTCGCTAGATGTCCAACCTCTTTTCT
TTCGACTCGGCCCCTGGCGGCGCGAACAAGGGGGGTCTTTTTGGATCTGG
TGCCACGAACACTGGCTCTAGCGCTGGCTCGGGCACACTCTTTGGAAACG
TAGGTGCTCCGACGAGCGGCACTTCTTCGCCTTCTTTGTTCGGGGGCGCA
GCTGGCAGTGGAACTGGAGCGGGTACTGGTACTTCGTCGCCTTTCAGTTT
CGGAGCTCAGAGCAAGCCGGGGGCCACCAGTCAGACACCGTTGTTCGGCA
ACGCATCACAGACTCCCAACAAGTCGACCGAAGCTGGTAGCTCAGGGCAA
ACAGCTACGAGCGGACTCTTTGGCAATGCCGCAAAGCCTGCAGGGGGCCT
CTTTGGCAACGCTACTTCTACGCCCGGTCAAACAGGAGGTTCTTTGTTCG
GCAATGCCTCGTCCACAACGCCCGCCGGTCCTCCTCCGCAGGGCGCGACT
GGCCAGACGCAGACGCTCTTTGGACAGGCAGCACAAAAGCCTGGCGGTCT
CTTCGGAAACGTGAACTCGACCACCTCGACTACCTCGACCACCTCATCGG
CTGCCCCGTCGTCTACTACCGCTACAGCCCCCGCCACCACTACCCCGTCG
CTGTTCGGAAACGCCAACACAAACACCACAACCTCTACCTCCAACACTAC
GCAACAGCCATCAACTGGGGGTCTCTTCGGTGGGGCGAACACAGCGCAGA
AACCTCTCTTTGGTACCAATCCGGCGCCTTCTACGGGAAATAGCCTGTTC
GGAAACGCCAAACCGGCCGCACCAAGCACCAATGACAGCACTCCAAACAC
CCTCTTTGGAAAGGCACCGGGGGCACCGTCAACGACGACAACCCCGGCCA
CAGGAGGAGGAGCTGGTGCGCAGACATCTTCTCTCTTCAAAGCCCCAGCA
TCTGGAGCTGATGCCACCAAGCCAGTCTTCCCCTCTCTGGGCACTCCGTC
CTCGACCCCTCAAACCTCTACGACGCCAGCTGCCTCGTCCGCTGCGCCAC
AGACTTCCTCTCTTTTCCCAGCCCTAGGTGGAGCGTCCTCGTCCGCGACT
CCATCATCAACACCCGCTCCCTCTGGAGGCTTGTTTGGCGGTGCCCTCGG
TGGCGCTAAGTCCACAGCAACCACCGCTCCCGCCACTACAGCTACCGCAG
CTCCCGCGACACAACCTGCGGCAGCCACCGGCGGCCTGTTCGGTAAGCCC
GCGGAGACCACCCCGTCCACACAGCCAGCCAGCACTGCTGCTGGAGCCTC
TGCTACGACGGCTGGCGACAAGCCCACCCTGACCGCTACCTCTGGCGCCA
CCTCTTCAGCTACCACCGGTACAGCAGGCGCAACAGGCACAACCACCGCC
ACTGGCGGAATTGGCCTTGGTGCCTCGACTGCTGGACCGACTCCTCCGGC
GCAGTCCCGCCTGAAGAACAAGACCATGGATGAGATCATCACCCGGTGGG
CGACTGATCTGACCAAGTACCAGAAGGACTTCCGCGAGCAAGCCGAGAAG
GTAGCAGAATGGGATCGGATGCTGGTTGAGAACGGCACCAAGGTGCAGAA
ACTGTACGGCAGCACGGTGGATGCTGAGCGCGCGACTCAAGAAGTCGAGC
GTCAGCTGGCGTCTGTCGAGGGCCAGCAGGAAGAGCTCAGCTCCTGGCTC
GACCGGTACGAGCGTGAAGTGGACGAGATGATTTCCAAGCAAGTCGGACC
GGGTGAAACTCTGCAGGGACCTGACCAGGAGCGTGAACGGACATACAAAA
TGGCCGAGAAGCTCTCCGAGCGCCTGGACGAAATGGGCAAGGATCTGACA
AGCATGATTGAGGAAGTCAACGGCGCGTCCTCGACTCTCAGCAAGACGAA
CAAGGCTGACGAGCCGATCTCGCAAATCGTCCGCATCCTCAACTCCCACC
TCGCGCAACTGCAGGTCATCGACCAAGGCACCACGGAGCTCCAGGCCAAG
GTCGACGCCGCACAGAAGGCCGGCCAGTCCCTCTCTTCGCGGTTCGGGTA
TGGTCTGGGTAGCTCTAGTGTGGGCGGTAGTGCCGCAGATGATTTCTATC
GCTCTTACATGGGACGTCGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025574 |
| DBxref | InterPro:IPR007758 |
| DBxref | PFAM:PF13634 |
| DBxref | PFAM:PF05064 |
| Product | nucleoporin Nsp1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851903.1 | supercontig | KZ851903.1:215139..217820 + |
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