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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851949.1:93641..94437+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_140666-T1 ID=M747DRAFT_140666-T1|Name=M747DRAFT_140666-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=797bp|location=Sequence derived from alignment at KZ851949.1:93641..94437+ (Aspergillus niger ATCC 13496)
TAGTCTTTGACTCATGCATTTCAATCTACTTCATCATATCGTCCGATATT
CATGGCATGATGGTCAACGTGTTAGGATCGAACCCCTCCCAGGCATCGGG
CAGAGGCGCTGGTTCTACGCGCCGGAATGACGAAACCGGAGAAGCGCAGG
GGCCGCCCAAAAAACAAAGGAGACAACGGCCCTCTCTCAGCTGCGCAGGT
TGGTGCCATCCCATCCCTGCAGTATGGTCTACGCCAAGAGCGGCCACGCA
ATGGCTAACGCTACGACTGTCAGAATGTCGCCGGCTGAAAATGAAATGCG
ACCGCCAGGGTTAGTAAACAAGCTAACTTGGCGTCTGGAGAGTCCCGGCT
GAAGAAAGATTGCAGTGCCATGCTCCAATTGTGTCCGTCGACGCCGGGCC
CCGTTCTGTAATCCGGGGATAACCGGCCAAACACCGCCACGGTGTGTGTT
TCTCTCGTTATCCCTGCGTTCAGGTCTGTCGCCAGCTAAGTCAGTATCAC
AGCAGAGAGTGTGGGGTGCACCAAAGACCGCGCCAGGCTGCTGGGCATGA
TCAGCCCTCGCAATCCCCGGGCGGAATTACTCGCCTTTCACCTGCGACCC
ATGAATCTGGCCCTCACCACATACAACGATGGGACGTGCTACCCCAACAT
GGCTTCCCTCAGCATCACAATCATGGCCAAGCTATTGTCGCTGCGCCGGG
CTCCGCGGACGCTCGGGGTCGGAACTTGGGGCCGCAGCAGAGCGGCAGAC
GGGATGAACAACTCGCCCTCCTCGCCCATGTGCTACAGTCAGACTCT back to topCoding sequence (CDS) from alignment at KZ851949.1:93641..94437+ >M747DRAFT_140666-T1 ID=M747DRAFT_140666-T1|Name=M747DRAFT_140666-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1089bp|location=Sequence derived from alignment at KZ851949.1:93641..94437+ (Aspergillus niger ATCC 13496)
ATGATGGTCAACGTGTTAGGATCGAACCCCTCCCAGGCATCGGGCAGAGG
CGCTGGTTCTACGCGCCGGAATGACGAAACCGGAGAAGCGCAGGGGCCGC
CCAAAAAACAAAGGAGACAACGGCCCTCTCTCAGCTGCGCAGAATGTCGC
CGGCTGAAAATGAAATGCGACCGCCAGGTGCCATGCTCCAATTGTGTCCG
TCGACGCCGGGCCCCGTTCTGTAATCCGGGGATAACCGGCCAAACACCGC
CACGGTGTGTGTTTCTCTCGTTATCCCTGCGTTCAGGTCTGTCGCCAGCT
AAGTCAGTATCACAGCAGAGAGTGTGGGGTGCACCAAAGACCGCGCCAGG
CTGCTGGGCATGAATGATGGTCAACGTGTTAGGATCGAACCCCTCCCAGG
CATCGGGCAGAGGCGCTGGTTCTACGCGCCGGAATGACGAAACCGGAGAA
GCGCAGGGGCCGCCCAAAAAACAAAGGAGACAACGGCCCTCTCTCAGCTG
CGCAGAATGTCGCCGGCTGAAAATGAAATGCGACCGCCAGGTGCCATGCT
CCAATTGTGTCCGTCGACGCCGGGCCCCGTTCTGTAATCCGGGGATAACC
GGCCAAACACCGCCACGGTGTGTGTTTCTCTCGTTATCCCTGCGTTCAGG
TCTGTCGCCAGCTAAGTCAGTATCACAGCAGAGAGTGTGGGGTGCACCAA
AGACCGCGCCAGGCTGCTGGGCATGAATGATGGTCAACGTGTTAGGATCG
AACCCCTCCCAGGCATCGGGCAGAGGCGCTGGTTCTACGCGCCGGAATGA
CGAAACCGGAGAAGCGCAGGGGCCGCCCAAAAAACAAAGGAGACAACGGC
CCTCTCTCAGCTGCGCAGAATGTCGCCGGCTGAAAATGAAATGCGACCGC
CAGGTGCCATGCTCCAATTGTGTCCGTCGACGCCGGGCCCCGTTCTGTAA
TCCGGGGATAACCGGCCAAACACCGCCACGGTGTGTGTTTCTCTCGTTAT
CCCTGCGTTCAGGTCTGTCGCCAGCTAAGTCAGTATCACAGCAGAGAGTG
TGGGGTGCACCAAAGACCGCGCCAGGCTGCTGGGCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519491.1 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851949.1 | supercontig | KZ851949.1:93641..94437 + |
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