You are here

Home

M747DRAFT_148809-T1, M747DRAFT_148809-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_148809-T1
Unique NameM747DRAFT_148809-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851957.1:114747..116066+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_148809-T1 ID=M747DRAFT_148809-T1|Name=M747DRAFT_148809-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1320bp|location=Sequence derived from alignment at KZ851957.1:114747..116066+ (Aspergillus niger ATCC 13496)
TCTCAATCACCCAACCAACCAACCTCGCATTCCACCTTCGCAAATCATCT
CCGCTTGAGCATCACCGCCCGGCGCGTTTTTACATCCAATTCAACATCCA
GACGCTCATTCCAGTCATTCATTCGCCTCGCACTTTTTTCACCAGAGCCC
GACACTACTACCGTTCATAATTAAGCCGTTCCAACCACTACCACCTACCG
TCACTGAACATCTCTCCTGCGCCTCCACCTCTATTCCGCCGATCTGATCA
GCACAAATGGGTATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACC
CCACGATGTAAGTTCAATCCTATATTCCTTTGCCGGAAAAAAGGCGCACG
CAACCAACACTCCTCCCTCCCTTTGCGCCCGACTCCACCAACCCTCTTCG
CATCCATCATTTAGATGCCAAAACTAACTTATCTCTATCACCACAGCCCA
ACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGC
TACGGTTACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCAGACCC
CAGCTACCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCAGCGGA
CATCAGAGTGAGCCACCCTTCACCACCAGTATGACAGAGATAGAGTATAG
TCCAATACTGATAACGTGCAACAGTTCCGTTATCGACATCTGGTCCCTCC
AACCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCC
CCTCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACAAC
CGACTCGACACCGGCCCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGG
CGGGCGGCACGGTCCCGAAACATTGGGGTGAGGTGGTGATAAATACGCGC
AAGAATCGGTCGCGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAA
GAGAGATGTGTTTGGAGTGTTGAAGGTTACATGACCGATATAACTATTTA
AAATGGGGGAGGTTGCGCAGATGGTGGCAGGTCAAATGTGATAGGTGTCG
TGTGGTGGTGTGTTATCGGGGGCGCTACTAGATGAAACACGGCAAGGAAG
TGGATGGACGGACTTCTGGACGAACATGGTGGACAGGCGTGACAACACTT
ATCGCATTTGACTTGACGTGTTTGATTGTTTTTTTCCTTTTACCCCATTC
TTCTTGATTCTGTTTTTTCTATTGCTTTCTTGTGGCCAGCTTTTTTCTAC
ATCATCCCCTTAATACCCCTTTTTCCTTTTCTTCGCGCATCGCGATGGGT
CGCCGGCGACGACGGGGTCA
back to top

Coding sequence (CDS) from alignment at KZ851957.1:114747..116066+

>M747DRAFT_148809-T1 ID=M747DRAFT_148809-T1|Name=M747DRAFT_148809-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1566bp|location=Sequence derived from alignment at KZ851957.1:114747..116066+ (Aspergillus niger ATCC 13496)
ATGGGTATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGA
TCCCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAAC
CGGGCTACGGTTACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCA
GACCCCAGCTACCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCA
GCGGACATCAGATTCCGTTATCGACATCTGGTCCCTCCAACCCCAACCGC
ATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCC
TCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTCGACACC
GGCCCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGG
TCCCGAAACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAATCGGTCG
CGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTT
TGGAGTGTTGAAGGTTACATGAATGGGTATCTGCGCCTCATGTCTAGGAC
GTAATCGTCAGGAACCCCACGATCCCAACCACCCCGAATCTTCCCGCCTC
CTCGATGAAGACATCTACCAACCGGGCTACGGTTACGGCGCCCTCCACCA
AAGCACCCAAGGCAATCACCCAGACCCCAGCTACCTGAAGCGCGAACGAG
AAGCCCTCGAAGCAATCTGTCAGCGGACATCAGATTCCGTTATCGACATC
TGGTCCCTCCAACCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCCAG
CACTGTCCCCCCTCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAAG
TAATAACAACCGACTCGACACCGGCCCGTTCAAAGAAACATTCCTCTCCG
GCTGCGAAGGCGGGCGGCACGGTCCCGAAACATTGGGGTGAGGTGGTGAT
AAATACGCGCAAGAATCGGTCGCGGCCTGGGTCGAGTACGGACGAAGACG
GTGCTGCTAAGAGAGATGTGTTTGGAGTGTTGAAGGTTACATGAATGGGT
ATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGATCCCAA
CCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCT
ACGGTTACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCAGACCCC
AGCTACCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCAGCGGAC
ATCAGATTCCGTTATCGACATCTGGTCCCTCCAACCCCAACCGCATCTCC
AACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCCTCCGAT
GGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTCGACACCGGCCCG
TTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGGTCCCGA
AACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAATCGGTCGCGGCCT
GGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTTTGGAGT
GTTGAAGGTTACATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0045121membrane raft
GO:0071986Ragulator complex
GO:0031902late endosome membrane
Vocabulary: Biological Process
TermDefinition
GO:0001919regulation of receptor recycling
GO:0032008positive regulation of TOR signaling
GO:0016197endosomal transport
GO:0042632cholesterol homeostasis
GO:0007040lysosome organization
GO:0043410positive regulation of MAPK cascade
GO:0071230cellular response to amino acid stimulus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_148809M747DRAFT_148809Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_148809-T1M747DRAFT_148809-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_148809-T1.utr5p1M747DRAFT_148809-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_148809-T1.exon1M747DRAFT_148809-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_148809-T1.exon2M747DRAFT_148809-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_148809-T1.exon3M747DRAFT_148809-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_148809-T1.cdsM747DRAFT_148809-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_148809-T1.utr3p1M747DRAFT_148809-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR028209
DBxrefPFAM:PF15454
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851957.1supercontigKZ851957.1:114747..116066 +
Powered by Drupal