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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851904.1:969817..971635+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_155274-T1 ID=M747DRAFT_155274-T1|Name=M747DRAFT_155274-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1819bp|location=Sequence derived from alignment at KZ851904.1:969817..971635+ (Aspergillus niger ATCC 13496)
AGCTATTATTGCTTTGCTGCTCACACCATCCTTTTTTATTATAAACTCCC
GTTGAGCCTAGTCTCCTCTTCATCGCCGCCTTCGTTTCCCATCTCTTTTT
TTCCTCCTCGTACTTTTCCTTGCTTTACTTTTTTTTTCTTCCCTTCCCTA
ACCTCCGTTGCGGTCTCAATTCCCCATTAATCACCACCAGCAACATTCCA
AGAGTTGGAAAATAGTTGCAGGTATAATCCGAGGATAGAGAAAAGCTCTG
CTTCGGGATTCACTTATAATCTTGCACCATCACCCATCAATCAATTCGCA
TCATGTCGGATCCTATCCAGGTTGCCGGGAAGAGAAAGCGTGCCAGTACG
TTCCCCCAATTGCAATTTAAACCCGCGGTTCGCTCTTCAATCCTTTCTCT
GCTTTTCCTGCGTTTCCCTGCTTTCCCTTCCCCCCAAATCTCTCAGCCTT
GCTGTCTCATGTACAGCCGGTGACACCTCGTGCTATTCCCCGCCTGATTT
TTCTTATCGCCAACGCGGGAGATCAACATTCCTTTTTTTTCTCTCTTCTT
TCTTACTTTTTCTTCTTCACGGCTGTCTTTCTTTGTCTCTCGCGATCCCA
TCATCATCCGTTGATGGGTTAATTCCCTGCATCGCTATTCTTTCTACGTT
GTTTGTTAAAATCACAATCACCGTCTTTTTCTATTCTTGTCTCTGTGACA
CGCCCTGTCTGTCGCATCACCCAGTGTCCAGCTCCATCTTAGCCTCATCA
TCCTCAACCAACCGCGTGGATCTGTCTTTTTTCTGTTATCGCCATTAGAA
ATGGTTGCTGACTCGGTTGAACCTGCAGGGACGCAATCCTGCCCTCCCCC
CGAATTGCCCCAGCTCGTTGCGGAACAGCACACTCCCATCCCTGCTCATG
ACAAAGAGACCCAGCGTCTGATTGTCGTTCTCTCCCATGCCAGCTTGGAA
ACCTATCGGGCTTCCAGCGGACGCAATGGTTCCGGTCGTGATGAGAAGTA
CTCCCTGCTCAACAGCGATGAACACATTGGTGTCATGCGCAAGATGAACC
GGGATATCAGCGAGGCTCGCCCGGATATCACACATCAGGTTGGTTGCTCT
GTCTGGGATAGCCAACAACGGCTTGGTGGATGGTTGCTAATGATATATGC
TTGTTAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGGCGGGTA
AGCTGCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAGGTGAAC
CCTAGCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTTGATGGT
ACAGCTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGGAGAAGC
TCCTGAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCCCCAACTGC
CGCAAGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCGCGACTA
CATCGAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAGGTGCCA
TGGCCAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATGACACGATT
TCCATCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAAGTTCTG
CCATGCCGCCGAGGAGGTGTGGGACATTGTCTGAGCGCAGAACTTCGGAC
GCTCCTATCCCGCTTCTCAGGAATGGCCAAAGCTTGACGAGGTGACGAAT
TTCCTTGCGCCCATACATCTGAAACGGTACGATCGAGAACGGTCAGCGGG
TCCTAGCTCGGGGACGAAACCTGTCTTCCGCGCGCTGTTCGCGTATTCTC
TCTGCCTGGGTGTATTTGC back to topCoding sequence (CDS) from alignment at KZ851904.1:969817..971635+ >M747DRAFT_155274-T1 ID=M747DRAFT_155274-T1|Name=M747DRAFT_155274-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2340bp|location=Sequence derived from alignment at KZ851904.1:969817..971635+ (Aspergillus niger ATCC 13496)
ATGTCGGATCCTATCCAGGTTGCCGGGAAGAGAAAGCGTGCCAGGACGCA
ATCCTGCCCTCCCCCCGAATTGCCCCAGCTCGTTGCGGAACAGCACACTC
CCATCCCTGCTCATGACAAAGAGACCCAGCGTCTGATTGTCGTTCTCTCC
CATGCCAGCTTGGAAACCTATCGGGCTTCCAGCGGACGCAATGGTTCCGG
TCGTGATGAGAAGTACTCCCTGCTCAACAGCGATGAACACATTGGTGTCA
TGCGCAAGATGAACCGGGATATCAGCGAGGCTCGCCCGGATATCACACAT
CAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGGCGGGTAAGCT
GCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAGGTGAACCCTA
GCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTTGATGGTACAG
CTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGGAGAAGCTCCT
GAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCCCCAACTGCCGCA
AGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCGCGACTACATC
GAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAGGTGCCATGGC
CAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATGACACGATTTCCA
TCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAAGTTCTGCCAT
GCCGCCGAGGAGGTGTGGGACATTGTCTGAATGTCGGATCCTATCCAGGT
TGCCGGGAAGAGAAAGCGTGCCAGGACGCAATCCTGCCCTCCCCCCGAAT
TGCCCCAGCTCGTTGCGGAACAGCACACTCCCATCCCTGCTCATGACAAA
GAGACCCAGCGTCTGATTGTCGTTCTCTCCCATGCCAGCTTGGAAACCTA
TCGGGCTTCCAGCGGACGCAATGGTTCCGGTCGTGATGAGAAGTACTCCC
TGCTCAACAGCGATGAACACATTGGTGTCATGCGCAAGATGAACCGGGAT
ATCAGCGAGGCTCGCCCGGATATCACACATCAGTGCCTGCTCACCCTGCT
CGACTCCCCCGTGAACAAGGCGGGTAAGCTGCAGATCTTCATCCACACTG
CCAAGGGTGTCTTGATCGAGGTGAACCCTAGCGTGCGCATTCCTCGTACC
TTCAAGCGATTCGCTGGTTTGATGGTACAGCTGTTGCACCGCCTCTCCAT
CCGTTCCACCAACTCCCAGGAGAAGCTCCTGAAGGTCATCAAGAACCCCA
TCACCGACCACCTTCCCCCCAACTGCCGCAAGGTGACCCTCAGTTTCGAA
GCCCCCGTGGTGCGCACCCGCGACTACATCGAATCGCTAGGCCCCAAGGA
GAGCGTCTGTATCTTCGTAGGTGCCATGGCCAAGGGACACGATGACTTTG
CCGACTCCTTCAAGGATGACACGATTTCCATCAGTAACTACAGCTTGAGT
GCCAGTGTCGCATGCAGCAAGTTCTGCCATGCCGCCGAGGAGGTGTGGGA
CATTGTCTGAATGTCGGATCCTATCCAGGTTGCCGGGAAGAGAAAGCGTG
CCAGGACGCAATCCTGCCCTCCCCCCGAATTGCCCCAGCTCGTTGCGGAA
CAGCACACTCCCATCCCTGCTCATGACAAAGAGACCCAGCGTCTGATTGT
CGTTCTCTCCCATGCCAGCTTGGAAACCTATCGGGCTTCCAGCGGACGCA
ATGGTTCCGGTCGTGATGAGAAGTACTCCCTGCTCAACAGCGATGAACAC
ATTGGTGTCATGCGCAAGATGAACCGGGATATCAGCGAGGCTCGCCCGGA
TATCACACATCAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGG
CGGGTAAGCTGCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAG
GTGAACCCTAGCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTT
GATGGTACAGCTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGG
AGAAGCTCCTGAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCCCC
AACTGCCGCAAGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCG
CGACTACATCGAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAG
GTGCCATGGCCAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATGAC
ACGATTTCCATCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAA
GTTCTGCCATGCCGCCGAGGAGGTGTGGGACATTGTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263DFA |
| DBxref | InterPro:IPR029028 |
| DBxref | InterPro:IPR029026 |
| DBxref | InterPro:IPR005304 |
| DBxref | PFAM:PF03587 |
| Product | 18S rRNA pseudouridine methyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851904.1 | supercontig | KZ851904.1:969817..971635 + |
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