You are here

Home

M747DRAFT_159448-T1, M747DRAFT_159448-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_159448-T1
Unique NameM747DRAFT_159448-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851963.1:5714..6282-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_159448-T1 ID=M747DRAFT_159448-T1|Name=M747DRAFT_159448-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=569bp|location=Sequence derived from alignment at KZ851963.1:5714..6282- (Aspergillus niger ATCC 13496)
CCGTGTTTCTCGGGCGCTATACAGTAGTTTGCAAAACTACCATGCCTACC
CCTTGACGCTCTGCCTCTTTCCCAATCCCTAGCCTTTCTGCGCTAGTCCT
TATACGTTTAGTTTGTATGTCAGACTCCTTGGCGCTGTTGGTCCCGTTTT
GTAAGTATGATAACATTACTTCCCTAATGTTACAGTACATGTAAATATAT
GACAGAAATCTAGAAGCTTCCATGTCCGGAAAAACGCTCAGGTGGCCACA
TTTGTATTACTTTTGGCTTCTCCAAACCACTTCACAGTTCCTATACCATG
GTGCAGAAAATAGTGCAGCGATGTCTCCACACCTATCGCCAGGACAGATT
CAGCCTATCTTTGATATGCAGTCAGTCGCGGCATGTCAAGCTCGGAAGCC
AGTGAAGCTGCTCAGGGCAGGAAGCAGGCGGTTAAAAAGCATCTCACCCA
AACTTCTTAAAGTCTTCAAATCCCTAGAGACCCCCAACATAGATTAGACC
AGTCCAAAGAGACAGTACAAGAAGAGTAAAATCACGAATAAGTCTAATAA
TCCCAGATCTCTTCTACAC
back to top

Coding sequence (CDS) from alignment at KZ851963.1:5714..6282-

>M747DRAFT_159448-T1 ID=M747DRAFT_159448-T1|Name=M747DRAFT_159448-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=276bp|location=Sequence derived from alignment at KZ851963.1:5714..6282- (Aspergillus niger ATCC 13496)
ATGTCCGGAAAAACGCTCAGGTGGCCACATTTGTATTACTTTTGGCTTCT
CCAAACCACTTCACAGTTCCTATACCATGGTGCAGAAAATAGTGCAGCGA
TGTCTCCACACCTATCGCCAGGACAGATTCAGCCTATCTTTGATATGCAG
TCAGTCGCGGCATGTCAAGCTCGGAAGCCAGTGAAGCTGCTCAGGGCAGG
AAGCAGGCGGTTAAAAAGCATCTCACCCAAACTTCTTAAAGTCTTCAAAT
CCCTAGAGACCCCCAACATAGATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_159448M747DRAFT_159448Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_159448-T1M747DRAFT_159448-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_159448-T1.cdsM747DRAFT_159448-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_159448-T1.utr3p1M747DRAFT_159448-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_159448-T1.exon2M747DRAFT_159448-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_159448-T1.exon1M747DRAFT_159448-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_159448-T1.utr5p2M747DRAFT_159448-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_159448-T1.utr5p1M747DRAFT_159448-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851963.1supercontigKZ851963.1:5714..6282 -
Powered by Drupal