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M747DRAFT_164145-T1, M747DRAFT_164145-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_164145-T1
Unique NameM747DRAFT_164145-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851905.1:482699..484358-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_164145-T1 ID=M747DRAFT_164145-T1|Name=M747DRAFT_164145-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1660bp|location=Sequence derived from alignment at KZ851905.1:482699..484358- (Aspergillus niger ATCC 13496)
ATACAAATTTTATCATCGCCCTGGTGGGGTCTGTGCCAACATGTTCTGAC
GACGTCCAGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAG
CAGCGTGCCATCAAGCCCATCATTGCCGGTACGTCTCCCCCCCGCGCGAT
CGCCTATAATCTATGATGCTAACTAGAGCATCCCAGGCCACGATGTCATT
GCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGC
TCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCG
CTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATT
GGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGT
CCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTA
CCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGAC
CAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTGTAAG
TCCATACCAGATCTGGGCCCAGGGAAGACGTGCCTTTGCTAATAAATGTG
ATTAGCGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCC
CAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCT
TGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGA
AGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAG
AAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCAC
CATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGC
TCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGT
GACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGG
ATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATG
TCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAG
AACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGT
TGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTG
AGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGT
AAGCTAGCCTTCACCCACACTCTGATTATCGTATCTTCCATACTGATTTT
TGGTTCCAGACCTCATCTAAACACCCTAATACCATCACCTAACGTCCCTC
GATGCGGATTACGAATGCAGTTGCCAATAACGCTCCAAGGGTGAGCTGCG
GTGGGAAAGACGTTTTGACATCGTTGCGCTTCTCTTGGTAAAGGAGAATC
CTTCAAAAAGTGGCTTTCTGTGTCTCCAGCATTTTCTCTTTCAGCAGTGG
CGAGCGGGAACCGTCTAATCTACGTGTTTCTGTCTTGTGCTGTTTATGGT
TTCCTTTGTCTGTTATTGCTTATGGAGATGCGACACGCTTGTGCGATTTT
ATTGCTGTAATTCATGGTTCTCTTCCGGAAACGCTTTTTCACACCCTTTT
TCCTTTGCTC
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Coding sequence (CDS) from alignment at KZ851905.1:482699..484358-

>M747DRAFT_164145-T1 ID=M747DRAFT_164145-T1|Name=M747DRAFT_164145-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2520bp|location=Sequence derived from alignment at KZ851905.1:482699..484358- (Aspergillus niger ATCC 13496)
ACCTCATCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTC
CTCCCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGA
TGTCCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGG
TCAAGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCT
GTTGAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGAC
CGTCACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCG
ACTGGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATG
CACGGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCG
TTCCGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTA
TCGATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAAC
CGTGAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAA
GGGTGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTG
AGATTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTT
GCTGATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTG
ACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCC
GGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGAT
GAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTACCTCATCTA
ACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGT
CTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAG
GTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCA
GGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGG
AGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATT
ACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCAC
TGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACA
TGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCT
TCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCA
GCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACT
ACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCC
ATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCA
GTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGATGAAC
ATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAA
CGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCC
ACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTC
ATCCTCGACGAGGCTGATGAGATGCTTTCTACCTCATCTAACGTGGTTTC
ACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGT
CACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCA
AGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACC
CTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAA
GCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCG
TCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTC
ACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGG
CCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCC
TGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCC
CTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCG
TATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCG
TCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGC
ACCCAGATCGAGGAGATGCCCATGAACGTTGCTGATGAACATTGAGTGCC
ACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGC
GCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGAT
TGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACG
AGGCTGATGAGATGCTTTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF1M747DRAFT_164145Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_164145-T1M747DRAFT_164145-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_164145-T1.cdsM747DRAFT_164145-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_164145-T1.utr3p1M747DRAFT_164145-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_164145-T1.exon3M747DRAFT_164145-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_164145-T1.exon2M747DRAFT_164145-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_164145-T1.exon1M747DRAFT_164145-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_164145-T1.utr5p1M747DRAFT_164145-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Producttranslation initiation factor eIF4A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851905.1supercontigKZ851905.1:482699..484358 -
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