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M747DRAFT_168461-T1, M747DRAFT_168461-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_168461-T1
Unique NameM747DRAFT_168461-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851969.1:45120..46641-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_168461-T1 ID=M747DRAFT_168461-T1|Name=M747DRAFT_168461-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1522bp|location=Sequence derived from alignment at KZ851969.1:45120..46641- (Aspergillus niger ATCC 13496)
CATTATTTGAATTCTTGTCCAACCCTCTGTTTCGACTGCTCTCGTTGCAC
CCTCTGATAAGGTTGCAAATAAGGTGCTTATTGTTTCCTGGCTGGGTTCA
GTCGAGTAATTACTTCGTGCAATAGTGGTTCTTGGTCCCTGCCCCTCCAC
CGCTAGAGACAACATAAGTCTTCTGGTCTCATCTTTGTTCGACACACCAC
AATAAGCCGAGAATATTTCCGTCCAAGCAGCATCATTGCTTTCCAGTCAC
CCCTCTACTACCCACAATGTACGACTGTGAAACCTGCCCTCGCTACTTCA
ACAGCTGGTATGCCTGTCGCCAGCACATGAACGACACGGGCCATTGGGGC
GTGCGGTACGAATGTGAAACCTGCGATGACCAGTTTTTGACTCAATGGGA
AGTGAAGGAACATATGGATGACTACAGACACCACGCACCCAAGATTCCTT
GCGAGACATGCGGGAGGAAGTTCTACAATCAAACGTCAGCGGATCAGCAC
ATGAATGCAATGGACCATTGGGCTCCAACATGGCCATGTGAGACTTGCAC
GCAGATGTTCCATACGGAAGGTGCTGCAGAACAGCATATGCAGGCCAAAT
CCCATTACAAGAACTACTGCCACCCCTGTAACCGGCGTTTCGATACCGAG
AATAACCTCAAGATGGTAAGGCCTTCTATTTCCTCAAACATCGTGAATAA
ACTCAGATTTCGCTTGTAGCACTTGAGTTCGAAGATTCACCGCGGTCAAG
ACATCTTCTGTCCTTTTTGCAACGCTGCTTTTACTACGGCCACTGGCGTC
GCTCACCACCTTGAAACCGGCTCCTGCAAACGTGCTACAGGCCTCAATCG
CGAGACTATCTACAAATTCGTTCGCAGCCGTGACACCCAAGGCGTCATTA
CAAGGAAGCTGCTTGAATGGAATGAGGATGACAACATTCAATACAAGGCT
AATTCCCGTGCATACAACGGCGCCTACTGGGAGTGCTACTTGTGTCATCG
GGAATTCAACAGCTTGACCGCACTTAATCAACATCTCAATTCGCCCGTGC
ACAAGCAGAAGCTATATCATTGTCCGAACGCGAAGTGTAGGAAGCAGTTT
GTTACTATAGCTGCTCTGTTTAATCACCTGGAAAGCGAATCTTGCGCCTT
TATGCGATTCGAGAAGGTACAGCGGCAGGTTCAGAATGTGTTCCGTGACC
AGAGAGCTATTGCATTCTGAAAAAGCACAACACGATACTGCCACTCAGAA
AGCTCGTCGCTGGATTCAAATCTGATGTCTGCTCGTACGGGCCTGAAATG
TAAGTGTCGGTATTCCACAGGCTGATTTCGGACGCTGTCATGAGCCAGCT
ACCAGGGCATATGGCGCAATCTCGCTACAAGACTGCTTCATTGAGGCCAC
TGTCTGACGTCTATCTATCTCTGTGTATTGAATCTGTTCTGATATTCTAT
TCCTCACCGCTGGCGGCTAATAAGGTCTCATTTCAAAAAATTCGCCCGAG
CATTATTATCCTAAATTGCAAC
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Coding sequence (CDS) from alignment at KZ851969.1:45120..46641-

>M747DRAFT_168461-T1 ID=M747DRAFT_168461-T1|Name=M747DRAFT_168461-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1800bp|location=Sequence derived from alignment at KZ851969.1:45120..46641- (Aspergillus niger ATCC 13496)
CACTTGAGTTCGAAGATTCACCGCGGTCAAGACATCTTCTGTCCTTTTTG
CAACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCACCTTGAAACCG
GCTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTATCTACAAATTC
GTTCGCAGCCGTGACACCCAAGGCGTCATTACAAGGAAGCTGCTTGAATG
GAATGAGGATGACAACATTCAATACAAGGCTAATTCCCGTGCATACAACG
GCGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCAACAGCTTGACC
GCACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAGAAGCTATATCA
TTGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTATAGCTGCTCTGT
TTAATCACCTGGAAAGCGAATCTTGCGCCTTTATGCGATTCGAGAAGGTA
CAGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCTATTGCATTCTG
AATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGGTATGCCT
GTCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTACGAATGT
GAAACCTGCGATGACCAGTTTTTGACTCAATGGGAAGTGAAGGAACATAT
GGATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACATGCGGGA
GGAAGTTCTACAATCAAACGTCAGCGGATCAGCACATGAATGCAATGGAC
CATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGTTCCATAC
GGAAGGTGCTGCAGAACAGCATATGCAGGCCAAATCCCATTACAAGAACT
ACTGCCACCCCTGTAACCGGCGTTTCGATACCGAGAATAACCTCAAGATG
CACTTGAGTTCGAAGATTCACCGCGGTCAAGACATCTTCTGTCCTTTTTG
CAACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCACCTTGAAACCG
GCTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTATCTACAAATTC
GTTCGCAGCCGTGACACCCAAGGCGTCATTACAAGGAAGCTGCTTGAATG
GAATGAGGATGACAACATTCAATACAAGGCTAATTCCCGTGCATACAACG
GCGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCAACAGCTTGACC
GCACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAGAAGCTATATCA
TTGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTATAGCTGCTCTGT
TTAATCACCTGGAAAGCGAATCTTGCGCCTTTATGCGATTCGAGAAGGTA
CAGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCTATTGCATTCTG
AATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGGTATGCCT
GTCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTACGAATGT
GAAACCTGCGATGACCAGTTTTTGACTCAATGGGAAGTGAAGGAACATAT
GGATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACATGCGGGA
GGAAGTTCTACAATCAAACGTCAGCGGATCAGCACATGAATGCAATGGAC
CATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGTTCCATAC
GGAAGGTGCTGCAGAACAGCATATGCAGGCCAAATCCCATTACAAGAACT
ACTGCCACCCCTGTAACCGGCGTTTCGATACCGAGAATAACCTCAAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_168461M747DRAFT_168461Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_168461-T1M747DRAFT_168461-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_168461-T1.cdsM747DRAFT_168461-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_168461-T1.utr3p1M747DRAFT_168461-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_168461-T1.exon2M747DRAFT_168461-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_168461-T1.exon1M747DRAFT_168461-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_168461-T1.utr5p1M747DRAFT_168461-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF13912
Productzinc finger protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851969.1supercontigKZ851969.1:45120..46641 -
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