|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851973.1:32518..34556- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_169608-T1 ID=M747DRAFT_169608-T1|Name=M747DRAFT_169608-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2039bp|location=Sequence derived from alignment at KZ851973.1:32518..34556- (Aspergillus niger ATCC 13496)
GATGAAGATTATCGCTACGTTGCAAAGCGGGAGTGGAAAAGGCGGGTGGT
GCGGAAGAGCGGATAAAGCGGATACTGCTATACGCATGGTATATCTGCAA
TATGATCAACTCTAGCTGTCCAGTTCAACATGCATGCTCTGGACTGATCT
TTCAATTCCTCTTGCCTTCAATATGCAGTCCTTCCTTCAGTATCGACGTC
TGCGCAGACACCTACACGAAAGTATCAAGATACACGGCCCCGCTGCCGCT
GGAGATCCTAATTCACAACCATCTGGTGACATCCTTGAAGACTATGAAGA
CGCTCGGCTCGACAGGCAACATTTAGCGAACCGTCCAAGCGCTGCTGTCC
CTTCCTCTTCTCGTAACTCCATCTCATCGCAAGGAATGCCTGGGGTGGTG
CTGCAGAACGGGCGAAGAGTGACTGTGCCAGGCGTTAGCGTTCATTCTGC
AACCGATGTTGAATTCACCAACGGGGAGGCTATCTTCATAGTGGGATTCG
ATGGTCCAGGCGACCCATTCAACCCGAAGAACTGGCCTGTGAGACAGAAA
TGGACGACGTTAGGTATTGTTGGCACAACGGGCTTTCTTGTGGGGTGGGC
TTCCTCGATCGATTCTGGAGTCATCAAACAGGGAGAAGAGGCGTTCGGGG
TCAGTGAAGTGACTGAGTCTCTTGCCACTGCGCTTTATCTAGTTGCATTC
GGATTTGGATCTCTTGTGGCAGCACCTTTCTCGGAAACTGTGGGACGCAA
CCCCGTCTACCTAGTGACCTTGTCACTTCTTATGATTTTCATCATGGCCT
CCGGTCTATCTCCAAATCTAGGCGCCCAGTTGGCATTCCGTTTTATTGCT
GGGCTATTCGGATGCACGCCGCTGACTACATTCGGTGGGAGTATGTCGGA
CATCTTCGACCTTCTAGATCGTACATATGCCTTTCCGGTGTGCTGTGCGT
TGTCTTTCTTGGGGCCTTTTCTCGCCCCAATGGTCGGTGCGTTCATTGGC
CAAAGCTCTGTCATATCCTGGCGTTGGTCAGAGTGGACATCTCTGATACT
TGCTGGGCTTATTACGGCCTCTATCTTCTTCTTTGTACCCGAGACCTACG
GGCCAGTACTTCTGCAGTGGAAGGCTCGCCAACTACGCACCATCACCGGC
GACCCTCGTTTCATGGCCGAGATCGAATTGCGCCAAACCACCCTACCCAT
CCGATTAATGCATAGCTGCTCGCGCCCCTTCAAGCTATTCTTCCAGGAGA
TTATGGTAGCTCTTTTTACGATGTACTTGGTGGTCGTATACATCGTGCTT
TTCGGCTTTCTAACGGGTTACGAGTTCATATACGGTCGCACATATGGTTT
TTCACAGGGCTCAGTGGGACTGACATATATTGGAATGAATGTGGGATTTT
TGATTGCACTCGCCATTGTTCCGCATGTCTACCTATCTTATAAGAGACGA
CTCCAGACAGCCATCGCTAGCGGCAAACCCAGTCTACCACCCGAAGAGCG
ACTCTGGTTCGCCATGTATGGCGCACCGTGGCTTCCGATATCTCTTTTCT
GGATGGGGTGGACCAGTTATCCGTCCGTCTCGTACTGGTCACCTCTAATT
GCATCTGTGGCGTTCGGGTTCTCGGTGCAGGGCATTTTCATAAGCAGCTA
TCAGTATTTGATCGATACGTATGAGATATTTGCTGCTAGTGCTCTTGTGA
GTGCGACATTCATGCGATATATTGCCGCAGGAGCTATGGTTATTGTGTCC
ATTCCAATGTACACTAACCTGGGTGTTCATTGGTCGCTTACCCTGCTGGG
ATGTATCTCCCTACTGATGACGCCGGTCCCATACATCTTCTATAGATTCG
GACATGCTATTCGCCGAAGGAGCAAGTCTGCCGCAGCATAACAGACTTCA
GGTCATTGCTCTATACGGTGAGCCATAAAGATTCAGCATCAATGAACTAG
CACGAGCATGCTCAATACCTACAGAGCATTAGGAATATGGGATATCGGAC
GGTTATGTAAGATGCGGTAGATAATATAGATGTTAGAAC back to topCoding sequence (CDS) from alignment at KZ851973.1:32518..34556- >M747DRAFT_169608-T1 ID=M747DRAFT_169608-T1|Name=M747DRAFT_169608-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1758bp|location=Sequence derived from alignment at KZ851973.1:32518..34556- (Aspergillus niger ATCC 13496)
ATGCTCTGGACTGATCTTTCAATTCCTCTTGCCTTCAATATGCAGTCCTT
CCTTCAGTATCGACGTCTGCGCAGACACCTACACGAAAGTATCAAGATAC
ACGGCCCCGCTGCCGCTGGAGATCCTAATTCACAACCATCTGGTGACATC
CTTGAAGACTATGAAGACGCTCGGCTCGACAGGCAACATTTAGCGAACCG
TCCAAGCGCTGCTGTCCCTTCCTCTTCTCGTAACTCCATCTCATCGCAAG
GAATGCCTGGGGTGGTGCTGCAGAACGGGCGAAGAGTGACTGTGCCAGGC
GTTAGCGTTCATTCTGCAACCGATGTTGAATTCACCAACGGGGAGGCTAT
CTTCATAGTGGGATTCGATGGTCCAGGCGACCCATTCAACCCGAAGAACT
GGCCTGTGAGACAGAAATGGACGACGTTAGGTATTGTTGGCACAACGGGC
TTTCTTGTGGGGTGGGCTTCCTCGATCGATTCTGGAGTCATCAAACAGGG
AGAAGAGGCGTTCGGGGTCAGTGAAGTGACTGAGTCTCTTGCCACTGCGC
TTTATCTAGTTGCATTCGGATTTGGATCTCTTGTGGCAGCACCTTTCTCG
GAAACTGTGGGACGCAACCCCGTCTACCTAGTGACCTTGTCACTTCTTAT
GATTTTCATCATGGCCTCCGGTCTATCTCCAAATCTAGGCGCCCAGTTGG
CATTCCGTTTTATTGCTGGGCTATTCGGATGCACGCCGCTGACTACATTC
GGTGGGAGTATGTCGGACATCTTCGACCTTCTAGATCGTACATATGCCTT
TCCGGTGTGCTGTGCGTTGTCTTTCTTGGGGCCTTTTCTCGCCCCAATGG
TCGGTGCGTTCATTGGCCAAAGCTCTGTCATATCCTGGCGTTGGTCAGAG
TGGACATCTCTGATACTTGCTGGGCTTATTACGGCCTCTATCTTCTTCTT
TGTACCCGAGACCTACGGGCCAGTACTTCTGCAGTGGAAGGCTCGCCAAC
TACGCACCATCACCGGCGACCCTCGTTTCATGGCCGAGATCGAATTGCGC
CAAACCACCCTACCCATCCGATTAATGCATAGCTGCTCGCGCCCCTTCAA
GCTATTCTTCCAGGAGATTATGGTAGCTCTTTTTACGATGTACTTGGTGG
TCGTATACATCGTGCTTTTCGGCTTTCTAACGGGTTACGAGTTCATATAC
GGTCGCACATATGGTTTTTCACAGGGCTCAGTGGGACTGACATATATTGG
AATGAATGTGGGATTTTTGATTGCACTCGCCATTGTTCCGCATGTCTACC
TATCTTATAAGAGACGACTCCAGACAGCCATCGCTAGCGGCAAACCCAGT
CTACCACCCGAAGAGCGACTCTGGTTCGCCATGTATGGCGCACCGTGGCT
TCCGATATCTCTTTTCTGGATGGGGTGGACCAGTTATCCGTCCGTCTCGT
ACTGGTCACCTCTAATTGCATCTGTGGCGTTCGGGTTCTCGGTGCAGGGC
ATTTTCATAAGCAGCTATCAGTATTTGATCGATACGTATGAGATATTTGC
TGCTAGTGCTCTTGTGAGTGCGACATTCATGCGATATATTGCCGCAGGAG
CTATGGTTATTGTGTCCATTCCAATGTACACTAACCTGGGTGTTCATTGG
TCGCTTACCCTGCTGGGATGTATCTCCCTACTGATGACGCCGGTCCCATA
CATCTTCTATAGATTCGGACATGCTATTCGCCGAAGGAGCAAGTCTGCCG
CAGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519731.1 |
| Note | EggNog:ENOG41 |
| Note | SMCOG1169:sugar transport protein |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | MFS general substrate transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851973.1 | supercontig | KZ851973.1:32518..34556 - |
|
