You are here

Home

M747DRAFT_170176-T1, M747DRAFT_170176-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_170176-T1
Unique NameM747DRAFT_170176-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851976.1:17188..18021-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_170176-T1 ID=M747DRAFT_170176-T1|Name=M747DRAFT_170176-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=834bp|location=Sequence derived from alignment at KZ851976.1:17188..18021- (Aspergillus niger ATCC 13496)
CCCAGGTATTGGCAGTAACAGATTGAAGGCTCGCCGAAGACGACGGTTTC
TCCTCTTGTCTAATTGAGCCAAGCGGTCTTGGTTGCTGGATGACAGTCGG
ACAAGCCACCGCTCTCGGAAAGCTTCATTATCCTCGCCCTCGTACTGCCG
GATCTTACGATATATTTCACCATCGGTCGGTTTCTTCTGATTTGCATATT
CATCTACCAGAGAGGTCTTTAGTTCTTCACCAATGTCAAAAGTGTTGTCA
GTCTTTACACGACGAAGCAATCAATCATACATGACCCACTGTGTTCGTAT
AGCCCCACGGGAAAGCAATTCTGACCGGAATTTTTAGCACGGATTGAGTT
ATGGGCTGTCCGGTCGTCGGAGGCGGACCAAGCAGACGATTTGGCCTCCG
TTGCGCGAGTAATGATGCAGCTCATGCAGAAATATGTTAAGGATGACGGA
GCAGTTGGGATTGACAACCTCGATCGTTGGCGCAACTTTTCCAGCTGCTA
TTGAATTCCTCTCAGCGACGACATCAGCCGGCTCATTGGGAGTTCTCGAA
AGGGTTAGTTGTATCCTCGTCACATTTGAAAGATGCTCATTTATTTTTAG
CAATGTCTCCTGACGGAAGTCCGTTGGTCTCGTAGTGACCTCATTGCATG
GTTTGCTCTAATATCTGCACGTACATTCTATTCGTACGCACCTTAGTCAG
ATGCAGAGAAGTAGACTACAATTGTGACTAGATGAGCTGCTGTACACTAA
AGACTGTTGATGCTTTCAATGGAGAACCATACAGATGCTCTTCCGATTTA
GTTACAGCACACTAATCGACCCTTCCTTTCGGTT
back to top

Coding sequence (CDS) from alignment at KZ851976.1:17188..18021-

>M747DRAFT_170176-T1 ID=M747DRAFT_170176-T1|Name=M747DRAFT_170176-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=432bp|location=Sequence derived from alignment at KZ851976.1:17188..18021- (Aspergillus niger ATCC 13496)
CAATGTCTCCTGACGGAAGTCCGTTGGTCTCGTAGTGACCTCATTGCATG
GTTTGCTCTAATATCTGCACGTACATTCTATTCGTACGCACCTTAGATGT
TAAGGATGACGGAGCAGTTGGGATTGACAACCTCGATCGTTGGCGCAACT
TTTCCAGCTGCTATTGAATTCCTCTCAGCGACGACATCAGCCGGCTCATT
GGGAGTTCTCGAAAGGCAATGTCTCCTGACGGAAGTCCGTTGGTCTCGTA
GTGACCTCATTGCATGGTTTGCTCTAATATCTGCACGTACATTCTATTCG
TACGCACCTTAGATGTTAAGGATGACGGAGCAGTTGGGATTGACAACCTC
GATCGTTGGCGCAACTTTTCCAGCTGCTATTGAATTCCTCTCAGCGACGA
CATCAGCCGGCTCATTGGGAGTTCTCGAAAGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_170176M747DRAFT_170176Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_170176-T1M747DRAFT_170176-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_170176-T1.cdsM747DRAFT_170176-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_170176-T1.utr3p1M747DRAFT_170176-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_170176-T1.exon3M747DRAFT_170176-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_170176-T1.exon2M747DRAFT_170176-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_170176-T1.exon1M747DRAFT_170176-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_170176-T1.utr5p2M747DRAFT_170176-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_170176-T1.utr5p1M747DRAFT_170176-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851976.1supercontigKZ851976.1:17188..18021 -
Powered by Drupal