You are here

Home

M747DRAFT_173563-T1, M747DRAFT_173563-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_173563-T1
Unique NameM747DRAFT_173563-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851906.1:400514..401608+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_173563-T1 ID=M747DRAFT_173563-T1|Name=M747DRAFT_173563-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1095bp|location=Sequence derived from alignment at KZ851906.1:400514..401608+ (Aspergillus niger ATCC 13496)
TTCTTAAGCCACCACCTATCCCACCGCCTCTTAGTTGACCTTGATTTACA
CCGATTGACGGTTATGAGCATGGTCTTCGCCCGCTCAACGGCTCCCATTA
CATCATTATAGTGTCTGTGAAGCAGATCGGTCTCTCTTCTCAGCACGATT
TCCGACCGTTCGTGGTACCAAATGGCCGGCCCTATTGGAATGGGGGCAAT
CCTCCGATCTTATTTAAATGCCTTCGTTCTTTTACTTGTCATTGGATCGC
CAGCAATCGCTCAGTTCTGCTCATTTTGGAGCGGTAGCTGTCTCGATGCC
CTGGCTCAGACTGCCGTCTCCTTCAATTTCCCCCCTCTGTTTGAGGAGAG
TCTCAACCTCTACTATGGATTCGACGCCAACTCCCGAGGAAAAGGCCAAG
AGCCCATGACTAAAGTTAGCTTTTGGCTCGGATACAGTGCTCTTCTCAAT
AGCTCTGTCATCAATTCCAACCGCACCTCTGAGATTGCTTTGCGGGTGGG
GAATCTTACCGGAACTCCGTCAGGTTCCAACAATGGCTGCGATGGCGTGT
GGGGCGCACAATGCTCGTACGACTTGATCACCTTGTTGAAGCAGGCCTTG
TATGGACTCACCACGAGTGGAAGTTACTATGATGACCCACTGGATACGGT
GTTGAGTGAAATGCTCATCAACCAGCCCGTACTCTCCAATTGCCCTCCGC
CTCTGTTCGACGTTGCTGCCATACCTTCTATCTGTATGTTGGCTCCGCTG
TTTGTTCTGCCTTCTGTTTGCAGTCCTTACTGACTGAATACAGCTTTTGC
TCAGGAAACTGATACCACCCGAATTGCAACCCTCCAAACGTCCGGATCCA
GCAGTGAACCCTGGAAGACATGGTTCATTGATAATATGACTGCTAATGAC
CAAGCAGCTCAAGTTGCAGTCGCCATTATTAGCAGAGCTCCATCCTACAA
CGGCAACCCTCCCAAATATGTGGATGATATACAAGTAGAGCTCGTTTGTA
CTCAGGCTCCATCTACAGGAAGCTCTTCGTCAAGTCAAGGCTCGTGACCT
ACGGTTGACCCCATATTTTTGGGAGAACAATCGACATGAATCAAC
back to top

Coding sequence (CDS) from alignment at KZ851906.1:400514..401608+

>M747DRAFT_173563-T1 ID=M747DRAFT_173563-T1|Name=M747DRAFT_173563-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1632bp|location=Sequence derived from alignment at KZ851906.1:400514..401608+ (Aspergillus niger ATCC 13496)
ATGGCCGGCCCTATTGGAATGGGGGCAATCCTCCGATCTTATTTAAATGC
CTTCGTTCTTTTACTTGTCATTGGATCGCCAGCAATCGCTCAGTTCTGCT
CATTTTGGAGCGGTAGCTGTCTCGATGCCCTGGCTCAGACTGCCGTCTCC
TTCAATTTCCCCCCTCTGTTTGAGGAGAGTCTCAACCTCTACTATGGATT
CGACGCCAACTCCCGAGGAAAAGGCCAAGAGCCCATGACTAAAGTTAGCT
TTTGGCTCGGATACAGTGCTCTTCTCAATAGCTCTGTCATCAATTCCAAC
CGCACCTCTGAGATTGCTTTGCGGGTGGGGAATCTTACCGGAACTCCGTC
AGGTTCCAACAATGGCTGCGATGGCGTGTGGGGCGCACAATGCTCGTACG
ACTTGATCACCTTGTTGAAGCAGGCCTTGTATGGACTCACCACGAGTGGA
AGTTACTATGATGACCCACTGGATACGGTGTTGAGTGAAATGCTCATCAA
CCAGCCCGTACTCTCCAATTGCCCTCCGCCTCTGTTCGACGTTGCTGCCA
TACCTTCTATCTCTTTTGCTCAGGAAACTGATACCACCCGAATTGCAACC
CTCCAAACGTCCGGATCCAGCAGTGAACCCTGGAAGACATGGTTCATTGA
TAATATGACTGCTAATGACCAAGCAGCTCAAGTTGCAGTCGCCATTATTA
GCAGAGCTCCATCCTACAACGGCAACCCTCCCAAATATGTGGATGATATA
CAAGTAGAGCTCGTTTGTACTCAGGCTCCATCTACAGGAAGCTCTTCGTC
AAGTCAAGGCTCGTGAATGGCCGGCCCTATTGGAATGGGGGCAATCCTCC
GATCTTATTTAAATGCCTTCGTTCTTTTACTTGTCATTGGATCGCCAGCA
ATCGCTCAGTTCTGCTCATTTTGGAGCGGTAGCTGTCTCGATGCCCTGGC
TCAGACTGCCGTCTCCTTCAATTTCCCCCCTCTGTTTGAGGAGAGTCTCA
ACCTCTACTATGGATTCGACGCCAACTCCCGAGGAAAAGGCCAAGAGCCC
ATGACTAAAGTTAGCTTTTGGCTCGGATACAGTGCTCTTCTCAATAGCTC
TGTCATCAATTCCAACCGCACCTCTGAGATTGCTTTGCGGGTGGGGAATC
TTACCGGAACTCCGTCAGGTTCCAACAATGGCTGCGATGGCGTGTGGGGC
GCACAATGCTCGTACGACTTGATCACCTTGTTGAAGCAGGCCTTGTATGG
ACTCACCACGAGTGGAAGTTACTATGATGACCCACTGGATACGGTGTTGA
GTGAAATGCTCATCAACCAGCCCGTACTCTCCAATTGCCCTCCGCCTCTG
TTCGACGTTGCTGCCATACCTTCTATCTCTTTTGCTCAGGAAACTGATAC
CACCCGAATTGCAACCCTCCAAACGTCCGGATCCAGCAGTGAACCCTGGA
AGACATGGTTCATTGATAATATGACTGCTAATGACCAAGCAGCTCAAGTT
GCAGTCGCCATTATTAGCAGAGCTCCATCCTACAACGGCAACCCTCCCAA
ATATGTGGATGATATACAAGTAGAGCTCGTTTGTACTCAGGCTCCATCTA
CAGGAAGCTCTTCGTCAAGTCAAGGCTCGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_173563M747DRAFT_173563Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173563-T1.utr5p1M747DRAFT_173563-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173563-T1.exon1M747DRAFT_173563-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_173563-T1.exon2M747DRAFT_173563-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173563-T1.cdsM747DRAFT_173563-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173563-T1.utr3p1M747DRAFT_173563-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_173563-T1M747DRAFT_173563-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-30)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851906.1supercontigKZ851906.1:400514..401608 +
Powered by Drupal