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M747DRAFT_179541-T1, M747DRAFT_179541-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_179541-T1
Unique NameM747DRAFT_179541-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:338738..339743+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_179541-T1 ID=M747DRAFT_179541-T1|Name=M747DRAFT_179541-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1006bp|location=Sequence derived from alignment at KZ851907.1:338738..339743+ (Aspergillus niger ATCC 13496)
CTATCTTTCTGTCAGTCTCCATTTCACTCATTTATCTAGTTGGCACGGTT
GCCTTTTTTCTTTCCTTTGCGTTTAGCTAAAACCTTCGGTATTGTATCTA
TCGGTACAGATACAGCCCAATCATGGAGGGCAACGCTTCAGCAGTCCTCC
GGGTTGAATTCGTTTCGAGGGTTAGGTGGGTTCGAAATTCTCTGCATACA
CGACTGTTCTCACTTCCGTTTTTATTGATGTTGAAGCATACGCTGAGATG
ATATGGGGCTAAATGAATGTGTGAATATCTAGAAGACGTGAGGTCGGCGG
CGGCGTGGACGTGAACAACCCCACCAGTTATATACAGAGGATGAGGATCC
AAGTGCACCAGCCCCATTCCCGATCTTCATCCCAGGTTACCCGACAGAGG
GGATATAGATCTGGCAGCGCGTACGGATTCCCGAGGGCAAGGGTGTCCCG
CTCCTTGTCTTGGGAAGCCCTCTCGCGGGCTCACAGAGACATGAGAAAGG
CTATTTCTCGCCGACATGTGGAAGGCAGGTGTCGCAACTGCGGATCCCCA
GAGCACTGGGAGGCTGATTGTGACAAATGCTGTGGTAAATGTTCGTATAA
TTTGGAGTGGCAGATATGTCGGAGTGGGCTGACGCTGGCTGATATTTTAG
GCAATGGTAGCGACCATAAAGTGTCTGACTGTGGGGGAAATGTTGTCTGC
TTTTCTTGTGAGTTCGCTGATGGGAGGAAGTGTGGATGGGGCTAACTGAG
GTGATTTTATAGGTGGTGGAGTAGGCCATATGCATGGTGATTGTCCATCG
AACTGAACATTGTGGGTGTAAGACTCCCAAGAAACGTTAGAGTGAGTGCG
GACTGTCTTTCTCACAGGCTGTATTAGATGTATATGGCTGACTCGATAGA
ACTTCTAGGATGAGTTGGGAAGATTGGGTGATAAGATCTTGTTGTTGTGC
TTGTTGTGAACTTGCATTGAGACCAGACTGTCAGTAGTGAGCATTAATTC
TAGCAT
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Coding sequence (CDS) from alignment at KZ851907.1:338738..339743+

>M747DRAFT_179541-T1 ID=M747DRAFT_179541-T1|Name=M747DRAFT_179541-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1848bp|location=Sequence derived from alignment at KZ851907.1:338738..339743+ (Aspergillus niger ATCC 13496)
ATGGAGGGCAACGCTTCAGCAGTCCTCCGGGTTGAATTCGTTTCGAGGGT
TAGAAGACGTGAGGTCGGCGGCGGCGTGGACGTGAACAACCCCACCAGTT
ATATACAGAGGATGAGGATCCAAGTGCACCAGCCCCATTCCCGATCTTCA
TCCCAGGTTACCCGACAGAGGGGATATAGATCTGGCAGCGCGTACGGATT
CCCGAGGGCAAGGGTGTCCCGCTCCTTGTCTTGGGAAGCCCTCTCGCGGG
CTCACAGAGACATGAGAAAGGCTATTTCTCGCCGACATGTGGAAGGCAGG
TGTCGCAACTGCGGATCCCCAGAGCACTGGGAGGCTGATTGTGACAAATG
CTGTGGTAAATGCAATGGTAGCGACCATAAAGTGTCTGACTGTGGGGGAA
ATGTTGTCTGCTTTTCTTGTGGTGGAGTAGGCCATATGCATGGTGATTGT
CCATCGAACTGAATGGAGGGCAACGCTTCAGCAGTCCTCCGGGTTGAATT
CGTTTCGAGGGTTAGAAGACGTGAGGTCGGCGGCGGCGTGGACGTGAACA
ACCCCACCAGTTATATACAGAGGATGAGGATCCAAGTGCACCAGCCCCAT
TCCCGATCTTCATCCCAGGTTACCCGACAGAGGGGATATAGATCTGGCAG
CGCGTACGGATTCCCGAGGGCAAGGGTGTCCCGCTCCTTGTCTTGGGAAG
CCCTCTCGCGGGCTCACAGAGACATGAGAAAGGCTATTTCTCGCCGACAT
GTGGAAGGCAGGTGTCGCAACTGCGGATCCCCAGAGCACTGGGAGGCTGA
TTGTGACAAATGCTGTGGTAAATGCAATGGTAGCGACCATAAAGTGTCTG
ACTGTGGGGGAAATGTTGTCTGCTTTTCTTGTGGTGGAGTAGGCCATATG
CATGGTGATTGTCCATCGAACTGAATGGAGGGCAACGCTTCAGCAGTCCT
CCGGGTTGAATTCGTTTCGAGGGTTAGAAGACGTGAGGTCGGCGGCGGCG
TGGACGTGAACAACCCCACCAGTTATATACAGAGGATGAGGATCCAAGTG
CACCAGCCCCATTCCCGATCTTCATCCCAGGTTACCCGACAGAGGGGATA
TAGATCTGGCAGCGCGTACGGATTCCCGAGGGCAAGGGTGTCCCGCTCCT
TGTCTTGGGAAGCCCTCTCGCGGGCTCACAGAGACATGAGAAAGGCTATT
TCTCGCCGACATGTGGAAGGCAGGTGTCGCAACTGCGGATCCCCAGAGCA
CTGGGAGGCTGATTGTGACAAATGCTGTGGTAAATGCAATGGTAGCGACC
ATAAAGTGTCTGACTGTGGGGGAAATGTTGTCTGCTTTTCTTGTGGTGGA
GTAGGCCATATGCATGGTGATTGTCCATCGAACTGAATGGAGGGCAACGC
TTCAGCAGTCCTCCGGGTTGAATTCGTTTCGAGGGTTAGAAGACGTGAGG
TCGGCGGCGGCGTGGACGTGAACAACCCCACCAGTTATATACAGAGGATG
AGGATCCAAGTGCACCAGCCCCATTCCCGATCTTCATCCCAGGTTACCCG
ACAGAGGGGATATAGATCTGGCAGCGCGTACGGATTCCCGAGGGCAAGGG
TGTCCCGCTCCTTGTCTTGGGAAGCCCTCTCGCGGGCTCACAGAGACATG
AGAAAGGCTATTTCTCGCCGACATGTGGAAGGCAGGTGTCGCAACTGCGG
ATCCCCAGAGCACTGGGAGGCTGATTGTGACAAATGCTGTGGTAAATGCA
ATGGTAGCGACCATAAAGTGTCTGACTGTGGGGGAAATGTTGTCTGCTTT
TCTTGTGGTGGAGTAGGCCATATGCATGGTGATTGTCCATCGAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_179541M747DRAFT_179541Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_179541-T1M747DRAFT_179541-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_179541-T1.utr5p1M747DRAFT_179541-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_179541-T1.exon1M747DRAFT_179541-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_179541-T1.exon2M747DRAFT_179541-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_179541-T1.exon3M747DRAFT_179541-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_179541-T1.exon4M747DRAFT_179541-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_179541-T1.exon5M747DRAFT_179541-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_179541-T1.cdsM747DRAFT_179541-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_179541-T1.utr3p1M747DRAFT_179541-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR
M747DRAFT_179541-T1.utr3p2M747DRAFT_179541-T1.utr3p2Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036875
DBxrefInterPro:IPR001878
DBxrefPFAM:PF00098
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:338738..339743 +
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