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M747DRAFT_180747-T1, M747DRAFT_180747-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_180747-T1
Unique NameM747DRAFT_180747-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:584430..586574-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_180747-T1 ID=M747DRAFT_180747-T1|Name=M747DRAFT_180747-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2145bp|location=Sequence derived from alignment at KZ851907.1:584430..586574- (Aspergillus niger ATCC 13496)
TAGACTTTTTGCTGGTTTATTACTCCCGGTCCCTTCTTCTACCACCACCA
ACTAAATCACCATCTCTCCTTCATCATCATCATTTCCCCCTATACTCCCC
CCTTCCTCATTTCATCCCTCCCTTACCTTTCGCTTCAGCGATGACCGGCA
TGCAGAATGAAGTCCTTTTCCAGTTCGGCCATTAGTACGTTCTTTGTCTC
CCCTCTTCCCGTGTCCCGTCCCGCCTTATATACCTTCAACTGCTAACCAT
GCCTCCTCTGCAGATAAGTCGGGCAAGAAATTTGCCCCCAAGGCGCCCGC
TCGCCGTCCTCCAGCTCCCGCTCCCCCGAGAAGACCCAGTGTAGCTTCCC
AGCCATCTGCTTCTCAGACTCCCCAACCTCCGACAGAGACAGCAACTCCC
GAACCAGGTCCACCAGCCCCCGCTGTTCAACCCTCCGTTCCCACTCAGCC
TTCAGTTCCGGACGAGCCAACAGTTTCTCCCAAGGAAAATGTCATTGTAC
CTCAGACTGCGACAGCCATTCCAATCCCTCGCCCTAAGCGCAAGGCTTCG
GTGTCTGCAGTCTCCCCAGGAACCATAGAACATGAACCTACCCCGCCTAC
ACCTACCGCACCGGAACCCCAAGTCGAGCAGATACAGGCTCCTGCGAGTG
ATACTCCGACTGCTGCGCCCGAGACACAGATATCCCGCCCCGATAATGAC
GCGACAGTGATTCGTCCATCCAAACGTCCCAAGACCACTGGAGAATCCAC
CGCCATCACCACCGATGCCGTCACCACCGTTTCCGCTCCTTCTGCTGCTG
CTGCTCCTCCTCCTCTTCCTGCTACAATCACGCGCACAACCGAATCCATT
GCGATAGACGCCAACCCCCAACTCGTTACTCCTCCAGCAACGCAGGCGGC
ACTTACTGATAGCGAGGGAACTGCAGATGCGCGCCCTAGAGCCGACTCGC
AGGTTACTACTGCCGAACAAGGTCGAAAGACAACGAGGGCTAGACGAAGA
TCAGTGAAGGATGTCAATGGGGAAAATGCGACAAAGAAGAAGGAAAGAAA
GCCTCGGACACGCAAGAAGCGCGAGCCGACCCCCGAAGGCGCCGAATCCG
TCGAGATCGCCCCCGCAATGGTCAAGATGTCGGAGCTGTGCAAGGATTTG
CGCACGGGTAAAATGTCCAAGCGAGAGACTGAGCTGCGCAACATGGAACA
GGCTGAGCAGGAGCGTAAGCAAAAAGCGCAGCAGGAAGGTGATACCGAGG
CACCGGTGAAAGAGAACGGGAACGACGCGTCTCCCGCGGAAGACCGGGAT
GAGAACCCAGACAACAAGGGACAGGCTGGACCAGTGATGAGGATTGTTAA
CGGAGAGATTGTGCTCGATACTGCTTCATTGCAGGTGGATCGCCATGCCG
ATGCCGCAAGGAATGCTGGGGAACTTGAAGATGTAATTGAAAACTCGTTT
ACTCGGAAGATCAATCAGGCGACATATGGAAAACGCTCCAAGACTGAGTC
CTGGGACGAGGAAATGACCGACCTTTTCTACCGGGGCTTGCGCATGTTTG
GTACAGACTTCATGATGATCAGCAAGTTGTTCCCGGGCCGTTCCCGGCGC
CAGATCAAGCTCAAGTTCAACAACGAAGAACGTCGTGACCCCCAGCGTAT
CAAAGAAACACTGCTGGGCCCACGCGAGACCATCGACATCAGTACCTACT
CGGAGATGACCAACACTGTCTACGACGACCCCAGGTTAATCCAACAGGAG
TTAGACGAGGAGCGGAAGCGAATTGAGGCTCAGCACGCCAAAGAGAAGGA
AGCGCAGGAAGAGATGCTTCGTAATCCTGACGGTGCGGCCGGTGGTGCCG
ACGGCACTCAGGGCAACGACGTGCCTGTCAAAGCGAAGCGGAACAACAGA
AAACAAGCCATGAAAGCCATGGCCGGTGGCACTGAAGAAGTTTTGGGCAC
CATTGATGATATACCTTGAGTACACAGGATCGATAAATTCAGTTTTACGG
CCGATTTCAATACCATGCGGGGATACAGGTGTTTTTGGCGTTGCAGTCCA
GACCAGTTGTACTGCCTGGCGCAGGAGTTTACTTGGGTTCCTGTTCGTCT
TTCTTTTGTCCCCCGGTGATGATGAATGTCTGTTTGTTTACTCTA
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Coding sequence (CDS) from alignment at KZ851907.1:584430..586574-

>M747DRAFT_180747-T1 ID=M747DRAFT_180747-T1|Name=M747DRAFT_180747-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3468bp|location=Sequence derived from alignment at KZ851907.1:584430..586574- (Aspergillus niger ATCC 13496)
ATAAGTCGGGCAAGAAATTTGCCCCCAAGGCGCCCGCTCGCCGTCCTCCA
GCTCCCGCTCCCCCGAGAAGACCCAGTGTAGCTTCCCAGCCATCTGCTTC
TCAGACTCCCCAACCTCCGACAGAGACAGCAACTCCCGAACCAGGTCCAC
CAGCCCCCGCTGTTCAACCCTCCGTTCCCACTCAGCCTTCAGTTCCGGAC
GAGCCAACAGTTTCTCCCAAGGAAAATGTCATTGTACCTCAGACTGCGAC
AGCCATTCCAATCCCTCGCCCTAAGCGCAAGGCTTCGGTGTCTGCAGTCT
CCCCAGGAACCATAGAACATGAACCTACCCCGCCTACACCTACCGCACCG
GAACCCCAAGTCGAGCAGATACAGGCTCCTGCGAGTGATACTCCGACTGC
TGCGCCCGAGACACAGATATCCCGCCCCGATAATGACGCGACAGTGATTC
GTCCATCCAAACGTCCCAAGACCACTGGAGAATCCACCGCCATCACCACC
GATGCCGTCACCACCGTTTCCGCTCCTTCTGCTGCTGCTGCTCCTCCTCC
TCTTCCTGCTACAATCACGCGCACAACCGAATCCATTGCGATAGACGCCA
ACCCCCAACTCGTTACTCCTCCAGCAACGCAGGCGGCACTTACTGATAGC
GAGGGAACTGCAGATGCGCGCCCTAGAGCCGACTCGCAGGTTACTACTGC
CGAACAAGGTCGAAAGACAACGAGGGCTAGACGAAGATCAGTGAAGGATG
TCAATGGGGAAAATGCGACAAAGAAGAAGGAAAGAAAGCCTCGGACACGC
AAGAAGCGCGAGCCGACCCCCGAAGGCGCCGAATCCGTCGAGATCGCCCC
CGCAATGGTCAAGATGTCGGAGCTGTGCAAGGATTTGCGCACGGGTAAAA
TGTCCAAGCGAGAGACTGAGCTGCGCAACATGGAACAGGCTGAGCAGGAG
CGTAAGCAAAAAGCGCAGCAGGAAGGTGATACCGAGGCACCGGTGAAAGA
GAACGGGAACGACGCGTCTCCCGCGGAAGACCGGGATGAGAACCCAGACA
ACAAGGGACAGGCTGGACCAGTGATGAGGATTGTTAACGGAGAGATTGTG
CTCGATACTGCTTCATTGCAGGTGGATCGCCATGCCGATGCCGCAAGGAA
TGCTGGGGAACTTGAAGATGTAATTGAAAACTCGTTTACTCGGAAGATCA
ATCAGGCGACATATGGAAAACGCTCCAAGACTGAGTCCTGGGACGAGGAA
ATGACCGACCTTTTCTACCGGGGCTTGCGCATGTTTGGTACAGACTTCAT
GATGATCAGCAAGTTGTTCCCGGGCCGTTCCCGGCGCCAGATCAAGCTCA
AGTTCAACAACGAAGAACGTCGTGACCCCCAGCGTATCAAAGAAACACTG
CTGGGCCCACGCGAGACCATCGACATCAGTACCTACTCGGAGATGACCAA
CACTGTCTACGACGACCCCAGGTTAATCCAACAGGAGTTAGACGAGGAGC
GGAAGCGAATTGAGGCTCAGCACGCCAAAGAGAAGGAAGCGCAGGAAGAG
ATGCTTCGTAATCCTGACGGTGCGGCCGGTGGTGCCGACGGCACTCAGGG
CAACGACGTGCCTGTCAAAGCGAAGCGGAACAACAGAAAACAAGCCATGA
AAGCCATGGCCGGTGGCACTGAAGAAGTTTTGGGCACCATTGATGATATA
CCTTGAATGAAGTCCTTTTCCAGTTCGGCCATTAATAAGTCGGGCAAGAA
ATTTGCCCCCAAGGCGCCCGCTCGCCGTCCTCCAGCTCCCGCTCCCCCGA
GAAGACCCAGTGTAGCTTCCCAGCCATCTGCTTCTCAGACTCCCCAACCT
CCGACAGAGACAGCAACTCCCGAACCAGGTCCACCAGCCCCCGCTGTTCA
ACCCTCCGTTCCCACTCAGCCTTCAGTTCCGGACGAGCCAACAGTTTCTC
CCAAGGAAAATGTCATTGTACCTCAGACTGCGACAGCCATTCCAATCCCT
CGCCCTAAGCGCAAGGCTTCGGTGTCTGCAGTCTCCCCAGGAACCATAGA
ACATGAACCTACCCCGCCTACACCTACCGCACCGGAACCCCAAGTCGAGC
AGATACAGGCTCCTGCGAGTGATACTCCGACTGCTGCGCCCGAGACACAG
ATATCCCGCCCCGATAATGACGCGACAGTGATTCGTCCATCCAAACGTCC
CAAGACCACTGGAGAATCCACCGCCATCACCACCGATGCCGTCACCACCG
TTTCCGCTCCTTCTGCTGCTGCTGCTCCTCCTCCTCTTCCTGCTACAATC
ACGCGCACAACCGAATCCATTGCGATAGACGCCAACCCCCAACTCGTTAC
TCCTCCAGCAACGCAGGCGGCACTTACTGATAGCGAGGGAACTGCAGATG
CGCGCCCTAGAGCCGACTCGCAGGTTACTACTGCCGAACAAGGTCGAAAG
ACAACGAGGGCTAGACGAAGATCAGTGAAGGATGTCAATGGGGAAAATGC
GACAAAGAAGAAGGAAAGAAAGCCTCGGACACGCAAGAAGCGCGAGCCGA
CCCCCGAAGGCGCCGAATCCGTCGAGATCGCCCCCGCAATGGTCAAGATG
TCGGAGCTGTGCAAGGATTTGCGCACGGGTAAAATGTCCAAGCGAGAGAC
TGAGCTGCGCAACATGGAACAGGCTGAGCAGGAGCGTAAGCAAAAAGCGC
AGCAGGAAGGTGATACCGAGGCACCGGTGAAAGAGAACGGGAACGACGCG
TCTCCCGCGGAAGACCGGGATGAGAACCCAGACAACAAGGGACAGGCTGG
ACCAGTGATGAGGATTGTTAACGGAGAGATTGTGCTCGATACTGCTTCAT
TGCAGGTGGATCGCCATGCCGATGCCGCAAGGAATGCTGGGGAACTTGAA
GATGTAATTGAAAACTCGTTTACTCGGAAGATCAATCAGGCGACATATGG
AAAACGCTCCAAGACTGAGTCCTGGGACGAGGAAATGACCGACCTTTTCT
ACCGGGGCTTGCGCATGTTTGGTACAGACTTCATGATGATCAGCAAGTTG
TTCCCGGGCCGTTCCCGGCGCCAGATCAAGCTCAAGTTCAACAACGAAGA
ACGTCGTGACCCCCAGCGTATCAAAGAAACACTGCTGGGCCCACGCGAGA
CCATCGACATCAGTACCTACTCGGAGATGACCAACACTGTCTACGACGAC
CCCAGGTTAATCCAACAGGAGTTAGACGAGGAGCGGAAGCGAATTGAGGC
TCAGCACGCCAAAGAGAAGGAAGCGCAGGAAGAGATGCTTCGTAATCCTG
ACGGTGCGGCCGGTGGTGCCGACGGCACTCAGGGCAACGACGTGCCTGTC
AAAGCGAAGCGGAACAACAGAAAACAAGCCATGAAAGCCATGGCCGGTGG
CACTGAAGAAGTTTTGGGCACCATTGATGATATACCTTGAATGAAGTCCT
TTTCCAGTTCGGCCATTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000126transcription factor TFIIIB complex
Vocabulary: Biological Process
TermDefinition
GO:0006383transcription by RNA polymerase III
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000995RNA polymerase III general transcription initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_180747M747DRAFT_180747Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180747-T1M747DRAFT_180747-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180747-T1.cdsM747DRAFT_180747-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180747-T1.utr3p1M747DRAFT_180747-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180747-T1.exon2M747DRAFT_180747-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_180747-T1.exon1M747DRAFT_180747-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_180747-T1.utr5p1M747DRAFT_180747-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265C25
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017174
DBxrefInterPro:IPR039467
DBxrefInterPro:IPR001005
DBxrefPFAM:PF15963
Product Bdp1 subunit
Producttranscription factor IIIB
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:584430..586574 -
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