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M747DRAFT_202470-T1, M747DRAFT_202470-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_202470-T1
Unique NameM747DRAFT_202470-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851935.1:237891..238264+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_202470-T1 ID=M747DRAFT_202470-T1|Name=M747DRAFT_202470-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=374bp|location=Sequence derived from alignment at KZ851935.1:237891..238264+ (Aspergillus niger ATCC 13496)
GAGAAGCCCAAGAAGGAAAACATCCTCGACCTCAACAAGTATATGGACAA
GGAGGTGCGCGTCAAGTTCAATGGCGGTCGTGAGGGTAAGATCCACCCCT
ACTGTTGCAATTTACATACACTCCTGCTGATATTTGTGTCCAGTTATTGG
TACGCTCAAGGGATACGACCAACTTATGAATCTGGTCCTGGACGATGTCA
AGGAATCCATGCGCGGTAAGCACACCCTGCAATTTCCACACCACGACTTT
ACTGACGGCCCCAGATGATGAGGGCAACGAGAACACTCGCTCTCTGGGTC
TCGTCGTGGCCCGTGGCACCATCATCGTCCTGATCTCGCCCGCCGACGGC
AGCGAGGAGATTGCCAACCCCTTC
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Coding sequence (CDS) from alignment at KZ851935.1:237891..238264+

>M747DRAFT_202470-T1 ID=M747DRAFT_202470-T1|Name=M747DRAFT_202470-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=801bp|location=Sequence derived from alignment at KZ851935.1:237891..238264+ (Aspergillus niger ATCC 13496)
GAGAAGCCCAAGAAGGAAAACATCCTCGACCTCAACAAGTATATGGACAA
GGAGGTGCGCGTCAAGTTCAATGGCGGTCGTGAGGTTATTGGTACGCTCA
AGGGATACGACCAACTTATGAATCTGGTCCTGGACGATGTCAAGGAATCC
ATGCGCGATGATGAGGGCAACGAGAACACTCGCTCTCTGGGTCTCGTCGT
GGCCCGTGGCACCATCATCGTCCTGATCTCGCCCGCCGACGGCAGCGAGG
AGATTGCCAACCCCTTCGAGAAGCCCAAGAAGGAAAACATCCTCGACCTC
AACAAGTATATGGACAAGGAGGTGCGCGTCAAGTTCAATGGCGGTCGTGA
GGTTATTGGTACGCTCAAGGGATACGACCAACTTATGAATCTGGTCCTGG
ACGATGTCAAGGAATCCATGCGCGATGATGAGGGCAACGAGAACACTCGC
TCTCTGGGTCTCGTCGTGGCCCGTGGCACCATCATCGTCCTGATCTCGCC
CGCCGACGGCAGCGAGGAGATTGCCAACCCCTTCGAGAAGCCCAAGAAGG
AAAACATCCTCGACCTCAACAAGTATATGGACAAGGAGGTGCGCGTCAAG
TTCAATGGCGGTCGTGAGGTTATTGGTACGCTCAAGGGATACGACCAACT
TATGAATCTGGTCCTGGACGATGTCAAGGAATCCATGCGCGATGATGAGG
GCAACGAGAACACTCGCTCTCTGGGTCTCGTCGTGGCCCGTGGCACCATC
ATCGTCCTGATCTCGCCCGCCGACGGCAGCGAGGAGATTGCCAACCCCTT
C
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0000956nuclear-transcribed mRNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_202470M747DRAFT_202470Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_202470-T1.exon1M747DRAFT_202470-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_202470-T1.exon2M747DRAFT_202470-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_202470-T1.exon3M747DRAFT_202470-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_202470-T1.cdsM747DRAFT_202470-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_202470-T1M747DRAFT_202470-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR017132
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductU6 snRNA-associated Sm-like protein LSm7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851935.1supercontigKZ851935.1:237891..238264 +
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