You are here

Home

M747DRAFT_223032-T1, M747DRAFT_223032-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_223032-T1
Unique NameM747DRAFT_223032-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851924.1:285802..286507+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_223032-T1 ID=M747DRAFT_223032-T1|Name=M747DRAFT_223032-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=706bp|location=Sequence derived from alignment at KZ851924.1:285802..286507+ (Aspergillus niger ATCC 13496)
CCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTG
GGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACTGATATCCAACA
AGCACTTTGATCCCGATGTCGAGGTCCGTTATTGTCTCATCTTTTGTAAT
GTACCACGCCAGAACATCACTAATATTTCCATAGGATGGCTCCGGCTGGA
CACCACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCCATC
ATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGTCTC
GGGCCAGGTACTTCCCGTCCCTTCCTCCTAGGCCACCTTTTCCCTAACTT
AATATCTGTGTCTACAATAGAACGCCCTCCACTTTGCAACTTCCAAAGCC
AACCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGT
AAAGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGAT
CCTCGCCTATCATCAAAATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAAT
GCAACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGG
TCACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATA
AGAGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAG
GTTCGT
back to top

Coding sequence (CDS) from alignment at KZ851924.1:285802..286507+

>M747DRAFT_223032-T1 ID=M747DRAFT_223032-T1|Name=M747DRAFT_223032-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1755bp|location=Sequence derived from alignment at KZ851924.1:285802..286507+ (Aspergillus niger ATCC 13496)
CCCAAGCTAGCAAATGTCAAAGATGACGATGATCGCCTTCCCATCCACTG
GGCGGTAGCATACAACCGTCTCCCGATTGTGGAGCTACTGATATCCAACA
AGCACTTTGATCCCGATGATGGCTCCGGCTGGACACCACTCATGATTGCA
TCTAGCTTGAAGAACGCCGAAGGCGATCCCATCATCGATCTCCTCCTCAA
GAAAGGCGCAGACGTCAGCACGAAGAGCGTCTCGGGCCAGGTACTTCCCA
ACGCCCTCCACTTTGCAACTTCCAAAGCCAACCTCTCCACCGTCCGCACC
CTCATCGCCAACAAATGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCT
GCCTCTGCACCGAGCAGCGGCGATTGGATCCTCGCCTATCATCAAAATCC
TTCTGGAGGAGGGGAAGAGTCCCGTCAATGCAACGGATGTTGATGGGCTG
ACAGCTTTACATCATGCCGTGTCAGAGGGTCACGGCGATGCAGCGATTAC
GTTGCTCAAGGCTGGTGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTT
TGGCCATTGATATGGCGCCGGATAGCAAGGTTCGTCCCAAGCTAGCAAAT
GTCAAAGATGACGATGATCGCCTTCCCATCCACTGGGCGGTAGCATACAA
CCGTCTCCCGATTGTGGAGCTACTGATATCCAACAAGCACTTTGATCCCG
ATGATGGCTCCGGCTGGACACCACTCATGATTGCATCTAGCTTGAAGAAC
GCCGAAGGCGATCCCATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGT
CAGCACGAAGAGCGTCTCGGGCCAGGTACTTCCCAACGCCCTCCACTTTG
CAACTTCCAAAGCCAACCTCTCCACCGTCCGCACCCTCATCGCCAACAAA
TGCAGCGCAAGAGTAAAGGATAGACGCGGACAGCTGCCTCTGCACCGAGC
AGCGGCGATTGGATCCTCGCCTATCATCAAAATCCTTCTGGAGGAGGGGA
AGAGTCCCGTCAATGCAACGGATGTTGATGGGCTGACAGCTTTACATCAT
GCCGTGTCAGAGGGTCACGGCGATGCAGCGATTACGTTGCTCAAGGCTGG
TGCGGAGGCAGATAAGAGGGATTCGAATGGTGTTTTGGCCATTGATATGG
CGCCGGATAGCAAGGTTCGTCCCAAGCTAGCAAATGTCAAAGATGACGAT
GATCGCCTTCCCATCCACTGGGCGGTAGCATACAACCGTCTCCCGATTGT
GGAGCTACTGATATCCAACAAGCACTTTGATCCCGATGATGGCTCCGGCT
GGACACCACTCATGATTGCATCTAGCTTGAAGAACGCCGAAGGCGATCCC
ATCATCGATCTCCTCCTCAAGAAAGGCGCAGACGTCAGCACGAAGAGCGT
CTCGGGCCAGGTACTTCCCAACGCCCTCCACTTTGCAACTTCCAAAGCCA
ACCTCTCCACCGTCCGCACCCTCATCGCCAACAAATGCAGCGCAAGAGTA
AAGGATAGACGCGGACAGCTGCCTCTGCACCGAGCAGCGGCGATTGGATC
CTCGCCTATCATCAAAATCCTTCTGGAGGAGGGGAAGAGTCCCGTCAATG
CAACGGATGTTGATGGGCTGACAGCTTTACATCATGCCGTGTCAGAGGGT
CACGGCGATGCAGCGATTACGTTGCTCAAGGCTGGTGCGGAGGCAGATAA
GAGGGATTCGAATGGTGTTTTGGCCATTGATATGGCGCCGGATAGCAAGG
TTCGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_223032M747DRAFT_223032Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_223032-T1.exon1M747DRAFT_223032-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_223032-T1.exon2M747DRAFT_223032-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_223032-T1.exon3M747DRAFT_223032-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_223032-T1.cdsM747DRAFT_223032-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_223032-T1M747DRAFT_223032-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Productgankyrin
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851924.1supercontigKZ851924.1:285802..286507 +
Powered by Drupal