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M747DRAFT_227657-T1, M747DRAFT_227657-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_227657-T1
Unique NameM747DRAFT_227657-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:473255..473991+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_227657-T1 ID=M747DRAFT_227657-T1|Name=M747DRAFT_227657-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=737bp|location=Sequence derived from alignment at KZ851899.1:473255..473991+ (Aspergillus niger ATCC 13496)
ATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGGTATGTCTCTGTGG
CTTCGCAGCAGATACGGAACGGAAACTGATCCTACTGAATCTATAGATGA
AGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAAA
AAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTCC
TTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCACG
TGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGAC
CTACTTACTTCGATGATGGACTTGTGAGTTGGAACACTATTTGGACTTTG
GATATATGCTAAGACTGGCTGCAGGCTGTACGCGAAGTGTATTCCGACCT
TCTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGC
CTCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTC
TCACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGGTGAGTGGTT
ACTCAAATTTTTCTTGGGTAGCACAGCGCGCTAACGACTCTTGTAGGTGA
CCAAGCATAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGTCGC
CGCCTGCGCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGGCAA
ATTCACCATCGAGAAGTTGCCCGATGCTTTGGATTAA
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Coding sequence (CDS) from alignment at KZ851899.1:473255..473991+

>M747DRAFT_227657-T1 ID=M747DRAFT_227657-T1|Name=M747DRAFT_227657-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2280bp|location=Sequence derived from alignment at KZ851899.1:473255..473991+ (Aspergillus niger ATCC 13496)
ATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGATGAAGCGCGCCAT
CAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAAAAAGGAGACGC
CCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTCCTTCGAACATG
TTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCACGTGCTGGTCGA
TACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGACCTACTTACTT
CGATGATGGACTTGCTGTACGCGAAGTGTATTCCGACCTTCTCAGACTGC
ACTATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGCCTCGCACTTCG
GGTTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTCTCACAAGGGTA
CCTATGCAGATGACTGTATCGTGGATCGGGTGACCAAGCATAGAATTTAC
ATTGTGGCGACCAATGATCAAGATCTGTGTCGCCGCCTGCGCAAGATTCC
TGGTGTTCCGATCATGAAGGTTGCTAGGGGCAAATTCACCATCGAGAAGT
TGCCCGATGCTTTGGATTAAATGGGTGTGCAAAAGAAGACTCGCAAGTTC
GCGCAGATGAAGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCC
GGAAGCGAAAAAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCA
CCCAAGCTCCTTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCT
CCCTACCACGTGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGC
CAAGCAGGACCTACTTACTTCGATGATGGACTTGCTGTACGCGAAGTGTA
TTCCGACCTTCTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGAC
AAGTACCGCCTCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGT
TAAGTGCTCTCACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGG
TGACCAAGCATAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGT
CGCCGCCTGCGCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGG
CAAATTCACCATCGAGAAGTTGCCCGATGCTTTGGATTAAATGGGTGTGC
AAAAGAAGACTCGCAAGTTCGCGCAGATGAAGCGCGCCATCAAAGCCCGT
GATGAGCGACTGAAGAAGCCGGAAGCGAAAAAGGAGACGCCCAAGGAGGA
TCAGCTGACTCGACAAGTCACCCAAGCTCCTTCGAACATGTTCTTTGCCG
CGAACACTGCCCTTGGCCCTCCCTACCACGTGCTGGTCGATACCAACTTT
GTTTCCCACGCCATTCGAGCCAAGCAGGACCTACTTACTTCGATGATGGA
CTTGCTGTACGCGAAGTGTATTCCGACCTTCTCAGACTGCACTATCGCGG
AATTGGAAAAGCTGGGTGACAAGTACCGCCTCGCACTTCGGGTTGCCAAA
GACCCTCGGTGGTCTAGGGTTAAGTGCTCTCACAAGGGTACCTATGCAGA
TGACTGTATCGTGGATCGGGTGACCAAGCATAGAATTTACATTGTGGCGA
CCAATGATCAAGATCTGTGTCGCCGCCTGCGCAAGATTCCTGGTGTTCCG
ATCATGAAGGTTGCTAGGGGCAAATTCACCATCGAGAAGTTGCCCGATGC
TTTGGATTAAATGGGTGTGCAAAAGAAGACTCGCAAGTTCGCGCAGATGA
AGCGCGCCATCAAAGCCCGTGATGAGCGACTGAAGAAGCCGGAAGCGAAA
AAGGAGACGCCCAAGGAGGATCAGCTGACTCGACAAGTCACCCAAGCTCC
TTCGAACATGTTCTTTGCCGCGAACACTGCCCTTGGCCCTCCCTACCACG
TGCTGGTCGATACCAACTTTGTTTCCCACGCCATTCGAGCCAAGCAGGAC
CTACTTACTTCGATGATGGACTTGCTGTACGCGAAGTGTATTCCGACCTT
CTCAGACTGCACTATCGCGGAATTGGAAAAGCTGGGTGACAAGTACCGCC
TCGCACTTCGGGTTGCCAAAGACCCTCGGTGGTCTAGGGTTAAGTGCTCT
CACAAGGGTACCTATGCAGATGACTGTATCGTGGATCGGGTGACCAAGCA
TAGAATTTACATTGTGGCGACCAATGATCAAGATCTGTGTCGCCGCCTGC
GCAAGATTCCTGGTGTTCCGATCATGAAGGTTGCTAGGGGCAAATTCACC
ATCGAGAAGTTGCCCGATGCTTTGGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FCF1M747DRAFT_227657Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_227657-T1.exon1M747DRAFT_227657-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_227657-T1.exon2M747DRAFT_227657-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_227657-T1.exon3M747DRAFT_227657-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_227657-T1.exon4M747DRAFT_227657-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_227657-T1.cdsM747DRAFT_227657-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_227657-T1M747DRAFT_227657-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264SET
DBxrefInterPro:IPR029060
DBxrefInterPro:IPR006984
DBxrefInterPro:IPR002716
DBxrefPFAM:PF18477
DBxrefPFAM:PF04900
ProductrRNA-processing protein fcf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:473255..473991 +
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