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M747DRAFT_231151-T1, M747DRAFT_231151-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_231151-T1
Unique NameM747DRAFT_231151-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:105265..105657+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_231151-T1 ID=M747DRAFT_231151-T1|Name=M747DRAFT_231151-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=393bp|location=Sequence derived from alignment at KZ851904.1:105265..105657+ (Aspergillus niger ATCC 13496)
ATGGAGAACGGTGCCTCATCTGATGGCAAGGATCCCTCAGCTTTTCTGGG
TGAAATCATTGGCGCCCCAGTTACTGTTAAATTGAACTCAGGCGTTGTCT
ATAAAGGTGAACGATCATATTCTGCTTTGTTCTACCTACCATTTCTGCCA
GTATCGTGTCTTTTTCCCCTGGTACAGGAGAAGGGAACCACTCTTATGGG
GGACAGGAGATAGATACAATCGAAGAACAGGAATATTAAAATGCTAACGA
ACTCTTCAGGGGAACTTCAATCGGTAGATGGCTATATGAATATCGCTCTG
GAGAAATCTGAGGAGTTTGTTAATGGAAAATTGTCCCGCAGTTACGGGGA
TGCCTTCATTCGTGGAAATAATGGTTTGTTGTGTCACACCTAA
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Coding sequence (CDS) from alignment at KZ851904.1:105265..105657+

>M747DRAFT_231151-T1 ID=M747DRAFT_231151-T1|Name=M747DRAFT_231151-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=480bp|location=Sequence derived from alignment at KZ851904.1:105265..105657+ (Aspergillus niger ATCC 13496)
ATGGAGAACGGTGCCTCATCTGATGGCAAGGATCCCTCAGCTTTTCTGGG
TGAAATCATTGGCGCCCCAGTTACTGTTAAATTGAACTCAGGCGTTGTCT
ATAAAGGGGAACTTCAATCGGTAGATGGCTATATGAATATCGCTCTGGAG
AAATCTGAGGAGTTTGTTAATGGAAAATTGTCCCGCAGTTACGGGGATGC
CTTCATTCGTGGAAATAATGGTTTGTTGTGTCACACCTAAATGGAGAACG
GTGCCTCATCTGATGGCAAGGATCCCTCAGCTTTTCTGGGTGAAATCATT
GGCGCCCCAGTTACTGTTAAATTGAACTCAGGCGTTGTCTATAAAGGGGA
ACTTCAATCGGTAGATGGCTATATGAATATCGCTCTGGAGAAATCTGAGG
AGTTTGTTAATGGAAAATTGTCCCGCAGTTACGGGGATGCCTTCATTCGT
GGAAATAATGGTTTGTTGTGTCACACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005732small nucleolar ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LSM6M747DRAFT_231151Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_231151-T1.exon1M747DRAFT_231151-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_231151-T1.exon2M747DRAFT_231151-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_231151-T1.cdsM747DRAFT_231151-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_231151-T1M747DRAFT_231151-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR016487
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductU4/U6-U5 snRNP complex subunit lsm6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:105265..105657 +
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