|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851910.1:838600..840849+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_23218-T1 ID=M747DRAFT_23218-T1|Name=M747DRAFT_23218-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2250bp|location=Sequence derived from alignment at KZ851910.1:838600..840849+ (Aspergillus niger ATCC 13496)
GTCGCCTGTACCATCACTGAATCAAAATCTTCTTATTTGGGCCACATTCC
CGCAAGGCCAGAAGTATTGCGATTGCGATTTGCTTGTTAGTCCGCCTGGA
CGGATTTCGCCTCGACCAATTGTGTGTGCTGTGCTAGTCTTACCTCTTTC
ACCATCTACTATCCGCCATGACTGAAGTCTCGTCCACCCGACTCTATCTC
GGGAACCTTCCCCGCAATGGTATGAAGCCATCTACAAAGTCTCCTTAGGT
CTCCTTGTTTTCTCTTCAACCCGCTCTGGATGTTACCCTTCTTGTCCACC
TCTATCTTCGACACAAAGATCGGGATGTTCCGCTGGATCGTCATGCGTCT
GGATTGACCTTCCTGAGTCACCGAGATTCCCCCTCCCCTCGGGAGATTGA
CGGCGGATTTTCCTTCATTTTGTTTCAATCTTCCTTGCTTGTATCACGGT
AATCTCAGTGTTCCGGATACCGGGTTGGCAGCTTCGAACTCAAAAATCAA
GTTGTCTCGGTTGTTTGTTCCTTCAAGTCCATTCGCAGTAAGCTGACATT
TTACTCACGGCGCCCCTGTTGGGCGCCATTAGTGGGGTTTCTTTTACAGT
GACCAAACAGGATATCGAGGAGCATTTCAGCACCCATGGTTCCGGAAAGA
TTACAGAGATCAAGCTCATGAATGGCTTCGGTTTCATTGAATATGAGGAT
GCGATGGATGCTAGAGATGTTGTACCCGGTAAGTCACCCTATTATGCGCC
CTAGCTGTCGCGGGAGCCTGCTAACGTAGGACGATTATCTAGCCTTCCGT
ATGTACCAACGCAAGCACCAGTTTGAAAGATCTTCATGGTTGACATAACC
CCTCATGCAGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATT
TGCCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTC
CCAATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGA
CTCCCGGAAACAAGTTGGCAGGTTAGCAGCCCAAGTCCCCTTTCTTCTGG
ATCCACCGGACGCCTTGCATCTCGGCCGATTTGCGTTCCCTGATTCATTT
TTGCCCTGTACTCCATTCTATGTTCTTCCACCGACGGCCCAAGGGAATCC
TGGCGACGATGATCAGCTCCTCTTGATGTATGGGTCGTTCACCAACCAAC
TTTCGGACCCCACCTAACTGAAAGGAAGGCTGGATGGCTGCCTCCCATGA
TCGAACCCCAGCTCTGAGTGCTGAGAACCGAGGCCGGACAACCCCGTCCA
GAATGGAACGCCCCCGCAGTCATTGAAGGATCCCTTCGCCTACTACCCTG
CATTGCTTGGGTCCTTTCCTGGCCTGTTTTTCCATCTTGTATTTTTCTAC
TTGCGGGCACCCGGACACATCGGATACCACTGTACCACTTTTGCACCTGG
ATATGGACTCACACCCTGGGGTTATCTAGGATCTTAAAGACTTTGCACGT
CAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAG
AGGGTGGGTTAATCCTTCAACTTTCTATCCGGTCGGACAGGGCCCCATTG
ACACATGCTCCCAAGATTCGTGGAATTTGAAACCGCCAACGACCTGAAGA
CGGCCATTGAGAAACTGGATGGACGTGAATTCAAAGGCTCCCGCGTCACT
TGCATTGCCGATGTAAGCAACTTTACTGGTACCTGTGATCTGAGTGGAAC
GAGAATTCTCATACCCTTCCTAGATTCAAACTTACCCGGATGAACGTGCC
ATTCGTGACCCGTACCGGTCTCGATCCCCGCGTCGGAGCTACCCTCCCAT
GGATGAATATGACCGGCGGTTCCCTGCGCCACGGGGATACAGCCCCCGGG
CTCACTATCGGGAACGCTCCCCCATTCCAATCCGGAGGGACTATTATGAC
CGGGATGGATATGGACGTCGTACTCCCCCCCGCCCTCGGATGGAAGACTA
CCCTCCCCCGCGTCGTCCCTACGATGACCCGTACGATGTCCGCCCGCCAC
CACCACCTCGCCATTATGACGACCCCTACGCACCCCCTCGCCCTTATGGA
CGGCCTCGCAGTCCACCTCGGGGCGAGTACATGCCTTACGACCGCCGCGG
ATACTGGTAGTTGTCTGTAATTAGCTCGTTGGTTGTGTTCCACTCAGCGC
ATGGCGGATACCCATTGTGCATGCTTTCCCCCCTTTGTTTTCTCTTGTTG
back to topCoding sequence (CDS) from alignment at KZ851910.1:838600..840849+ >M747DRAFT_23218-T1 ID=M747DRAFT_23218-T1|Name=M747DRAFT_23218-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6342bp|location=Sequence derived from alignment at KZ851910.1:838600..840849+ (Aspergillus niger ATCC 13496)
ATGACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAA
TGTGACCAAACAGGATATCGAGGAGCATTTCAGCACCCATGGTTCCGGAA
AGATTACAGAGATCAAGCTCATGAATGGCTTCGGTTTCATTGAATATGAG
GATGCGATGGATGCTAGAGATGTTGTACCCGCCTTCCACGGTAGTGATTT
CAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGTGGACCGCGCCGCAAGG
AGAACTTCCCTGGCCCAATGGACCGTCCCAATATGCCTCGTCCGCGTCGC
ACGATCTTTCGCATGATGGTTTCTGGACTCCCGGAAACAAGTTGGCAGGA
TCTTAAAGACTTTGCACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAA
CTGGCCGTGAACTCGGCAGAGGATTCGTGGAATTTGAAACCGCCAACGAC
CTGAAGACGGCCATTGAGAAACTGGATGGACGTGAATTCAAAGGCTCCCG
CGTCACTTGCATTGCCGATATTCAAACTTACCCGGATGAACGTGCCATTC
GTGACCCGTACCGGTCTCGATCCCCGCGTCGGAGCTACCCTCCCATGGAT
GAATATGACCGGCGGTTCCCTGCGCCACGGGGATACAGCCCCCGGGCTCA
CTATCGGGAACGCTCCCCCATTCCAATCCGGAGGGACTATTATGACCGGG
ATGGATATGGACGTCGTACTCCCCCCCGCCCTCGGATGGAAGACTACCCT
CCCCCGCGTCGTCCCTACGATGACCCGTACGATGTCCGCCCGCCACCACC
ACCTCGCCATTATGACGACCCCTACGCACCCCCTCGCCCTTATGGACGGC
CTCGCAGTCCACCTCGGGGCGAGTACATGCCTTACGACCGCCGCGGATAC
TGGTAGATGACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCC
CCGCAATGTGACCAAACAGGATATCGAGGAGCATTTCAGCACCCATGGTT
CCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCGGTTTCATTGAA
TATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGCCTTCCACGGTAG
TGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGTGGACCGCGCC
GCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAATATGCCTCGTCCG
CGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCCGGAAACAAGTTG
GCAGGATCTTAAAGACTTTGCACGTCAATCTGGCTTGGACGTGGTTTACT
CTGAAACTGGCCGTGAACTCGGCAGAGGATTCGTGGAATTTGAAACCGCC
AACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGAATTCAAAGG
CTCCCGCGTCACTTGCATTGCCGATATTCAAACTTACCCGGATGAACGTG
CCATTCGTGACCCGTACCGGTCTCGATCCCCGCGTCGGAGCTACCCTCCC
ATGGATGAATATGACCGGCGGTTCCCTGCGCCACGGGGATACAGCCCCCG
GGCTCACTATCGGGAACGCTCCCCCATTCCAATCCGGAGGGACTATTATG
ACCGGGATGGATATGGACGTCGTACTCCCCCCCGCCCTCGGATGGAAGAC
TACCCTCCCCCGCGTCGTCCCTACGATGACCCGTACGATGTCCGCCCGCC
ACCACCACCTCGCCATTATGACGACCCCTACGCACCCCCTCGCCCTTATG
GACGGCCTCGCAGTCCACCTCGGGGCGAGTACATGCCTTACGACCGCCGC
GGATACTGGTAGATGACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAA
CCTTCCCCGCAATGTGACCAAACAGGATATCGAGGAGCATTTCAGCACCC
ATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCGGTTTC
ATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGCCTTCCA
CGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGTGGAC
CGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAATATGCCT
CGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCCGGAAAC
AAGTTGGCAGGATCTTAAAGACTTTGCACGTCAATCTGGCTTGGACGTGG
TTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGATTCGTGGAATTTGAA
ACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGAATT
CAAAGGCTCCCGCGTCACTTGCATTGCCGATATTCAAACTTACCCGGATG
AACGTGCCATTCGTGACCCGTACCGGTCTCGATCCCCGCGTCGGAGCTAC
CCTCCCATGGATGAATATGACCGGCGGTTCCCTGCGCCACGGGGATACAG
CCCCCGGGCTCACTATCGGGAACGCTCCCCCATTCCAATCCGGAGGGACT
ATTATGACCGGGATGGATATGGACGTCGTACTCCCCCCCGCCCTCGGATG
GAAGACTACCCTCCCCCGCGTCGTCCCTACGATGACCCGTACGATGTCCG
CCCGCCACCACCACCTCGCCATTATGACGACCCCTACGCACCCCCTCGCC
CTTATGGACGGCCTCGCAGTCCACCTCGGGGCGAGTACATGCCTTACGAC
CGCCGCGGATACTGGTAGATGACTGAAGTCTCGTCCACCCGACTCTATCT
CGGGAACCTTCCCCGCAATGTGACCAAACAGGATATCGAGGAGCATTTCA
GCACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTC
GGTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGC
CTTCCACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCC
GTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAAT
ATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCC
GGAAACAAGTTGGCAGGATCTTAAAGACTTTGCACGTCAATCTGGCTTGG
ACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGATTCGTGGAA
TTTGAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACG
TGAATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATATTCAAACTTACC
CGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCGATCCCCGCGTCGG
AGCTACCCTCCCATGGATGAATATGACCGGCGGTTCCCTGCGCCACGGGG
ATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCCATTCCAATCCGGA
GGGACTATTATGACCGGGATGGATATGGACGTCGTACTCCCCCCCGCCCT
CGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACGATGACCCGTACGA
TGTCCGCCCGCCACCACCACCTCGCCATTATGACGACCCCTACGCACCCC
CTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGGCGAGTACATGCCT
TACGACCGCCGCGGATACTGGTAGATGACTGAAGTCTCGTCCACCCGACT
CTATCTCGGGAACCTTCCCCGCAATGTGACCAAACAGGATATCGAGGAGC
ATTTCAGCACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAAT
GGCTTCGGTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGT
ACCCGCCTTCCACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAAT
TTGCCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGT
CCCAATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGG
ACTCCCGGAAACAAGTTGGCAGGATCTTAAAGACTTTGCACGTCAATCTG
GCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGATTC
GTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGA
TGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATATTCAAA
CTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCGATCCCCG
CGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCCCTGCGCC
ACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCCATTCCAA
TCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTACTCCCCCC
CGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACGATGACCC
GTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGACCCCTACG
CACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGGCGAGTAC
ATGCCTTACGACCGCCGCGGATACTGGTAGATGACTGAAGTCTCGTCCAC
CCGACTCTATCTCGGGAACCTTCCCCGCAATGTGACCAAACAGGATATCG
AGGAGCATTTCAGCACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTC
ATGAATGGCTTCGGTTTCATTGAATATGAGGATGCGATGGATGCTAGAGA
TGTTGTACCCGCCTTCCACGGTAGTGATTTCAAAGGCGAGCGCCTCACCG
TGCAATTTGCCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATG
GACCGTCCCAATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGT
TTCTGGACTCCCGGAAACAAGTTGGCAGGATCTTAAAGACTTTGCACGTC
AATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTCGGCAGA
GGATTCGTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCATTGAGAA
ACTGGATGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATA
TTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCGA
TCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCCC
TGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCCA
TTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTACT
CCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACGA
TGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGACC
CCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGGC
GAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATGACTGAAGTCTC
GTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAATGTGACCAAACAGG
ATATCGAGGAGCATTTCAGCACCCATGGTTCCGGAAAGATTACAGAGATC
AAGCTCATGAATGGCTTCGGTTTCATTGAATATGAGGATGCGATGGATGC
TAGAGATGTTGTACCCGCCTTCCACGGTAGTGATTTCAAAGGCGAGCGCC
TCACCGTGCAATTTGCCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGC
CCAATGGACCGTCCCAATATGCCTCGTCCGCGTCGCACGATCTTTCGCAT
GATGGTTTCTGGACTCCCGGAAACAAGTTGGCAGGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGATTCGTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCAT
TGAGAAACTGGATGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATTG
CCGATATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGG
TCTCGATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCG
GTTCCCTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCT
CCCCCATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGT
CGTACTCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCC
CTACGATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATG
ACGACCCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCT
CGGGGCGAGTACATGCCTTACGACCGCCGCGGATACTGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA-binding domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851910.1 | supercontig | KZ851910.1:838600..840849 + |
|
