You are here

Home

M747DRAFT_234050-T1, M747DRAFT_234050-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_234050-T1
Unique NameM747DRAFT_234050-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:204241..205817-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_234050-T1 ID=M747DRAFT_234050-T1|Name=M747DRAFT_234050-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1577bp|location=Sequence derived from alignment at KZ851908.1:204241..205817- (Aspergillus niger ATCC 13496)
ATGGCCCAGGTGCAGCTCATCTTATCCAGCAAACACCGGAAGAGCGCCGG
GAAGAGATCTAGGACAGGTTGTCGTACCTGCCGGTAAGGAGGGGAAGCAG
TACATGGAAACTGATGGCACGAGACACTAGCACTAACCGAGGACTTTCCA
TGCCCAGAATCCGACGGATCAAATGCGATGAATCGCCAGGACAATGCAAC
AACTGCGTCTCTGCTAACTGGACGTGCGACGGATACGATGCGTACCGGTT
GCCGCAGCGCCGAGGTCTACAGGATATAGGCACTCGGCTGGGTTGGATGA
TGACGTCGGATGAACACCGTTGTTATTCCTATTTTCAATATCGTTCCGTT
ACGAATCTGGCCGGGTTCTTCGACTCCCCACTCTGGCAGCAGTTGGCCCT
ACAGATGTCTCGCACTGATCCGGCTGTATTTCATGCGGTGAATATGTTGA
GTGCTGCGCACCAGGAGTCGGAATTGCATAATATGCAGATTTCTGCACGG
TCACGCATTGGGAGCCAGCAGTATTACTTTTCTCTTCAGCAGTCCACGCG
GGCCATCGCGCTCCTGAACCAGCGCCGGAACTCCCAGGATCCCCAGCTGC
GCCAAACCATCCTCCTGTGCTGTCTGCTCTTTGTTCTATTCGATGTGCTT
GTCGCGCAGTATGACAGTGCGTTCACGCATTTACACGGCGGTCTCCGTAT
TCTAAAAGAACTCGAAATCCAAGGGAAGCTGGAGTCGGAGGTTGAGCCAT
CAATAGTTGCCGCATTTCGCCGCCTGGATACACAGGCCTCTCTCTATGAT
ACTCGGTTTCCGATCCTAAGCCTGGAGTATGGGAATCAATCCCCGCTTAA
GTTGTTCGAAGCACCAACAGGCGGCTTTACTAGCCTTAGCCAGGTACGAG
AGAAAATCACAGTTCTATTCACAGCGGGTATACCCTTGGTTGCAAGGAGC
TGGAGCCTGAACGGTTCCAACATGGAGACCAACTACGAGTCACTCTACCA
AAGTCAACGGCGATTGCTAGATGCTTTCGCTGAGTTTGACCTACATTTCA
CGTCTTTCCGCGTGACAAAATATCATCAGTTAAGCGAGAAGGAGCAATTG
GGAGCAGATATCACCTACTTGCTTTACCTTGGTCACACTCTCACACTCAA
AACTGTGTTAATTCGTGGACCAGTGCCAGAGTCTCTGGTTCCGGAATTCC
TTGCGCTACTTCAGGCCCATGAAGACATGATCGAGAAGCTCAAGTCCGTC
TCGGGCCTTGTAATGGACCACGTCATGATTGCCCACATGTACCTTGTGGC
CACACAATGCCCAGACGTGGGGATTCGCATACGCGCTATTCGTCTTTTGC
GGTCATGGCCACATTACGAGGGCCTTCACAGCTCCAATGTCACTGCTCTG
ATGGCGTTGGGTGCGCTCAAAAGGGACTTTCCCAATGAAGACAAGGCCTT
GTCGATGTTGCAGACGACTGACGCGGAGAATGAATTTCTCGTCGACTCCT
TGGAGTCTATCAAGAATGGCGTGGGAGAACCTACAATTCCGCTTTTCAGG
ATGTCTGAGTTGCCGTCACGCCCATGA
back to top

Coding sequence (CDS) from alignment at KZ851908.1:204241..205817-

>M747DRAFT_234050-T1 ID=M747DRAFT_234050-T1|Name=M747DRAFT_234050-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3006bp|location=Sequence derived from alignment at KZ851908.1:204241..205817- (Aspergillus niger ATCC 13496)
AATCCGACGGATCAAATGCGATGAATCGCCAGGACAATGCAACAACTGCG
TCTCTGCTAACTGGACGTGCGACGGATACGATGCGTACCGGTTGCCGCAG
CGCCGAGGTCTACAGGATATAGGCACTCGGCTGGGTTGGATGATGACGTC
GGATGAACACCGTTGTTATTCCTATTTTCAATATCGTTCCGTTACGAATC
TGGCCGGGTTCTTCGACTCCCCACTCTGGCAGCAGTTGGCCCTACAGATG
TCTCGCACTGATCCGGCTGTATTTCATGCGGTGAATATGTTGAGTGCTGC
GCACCAGGAGTCGGAATTGCATAATATGCAGATTTCTGCACGGTCACGCA
TTGGGAGCCAGCAGTATTACTTTTCTCTTCAGCAGTCCACGCGGGCCATC
GCGCTCCTGAACCAGCGCCGGAACTCCCAGGATCCCCAGCTGCGCCAAAC
CATCCTCCTGTGCTGTCTGCTCTTTGTTCTATTCGATGTGCTTGTCGCGC
AGTATGACAGTGCGTTCACGCATTTACACGGCGGTCTCCGTATTCTAAAA
GAACTCGAAATCCAAGGGAAGCTGGAGTCGGAGGTTGAGCCATCAATAGT
TGCCGCATTTCGCCGCCTGGATACACAGGCCTCTCTCTATGATACTCGGT
TTCCGATCCTAAGCCTGGAGTATGGGAATCAATCCCCGCTTAAGTTGTTC
GAAGCACCAACAGGCGGCTTTACTAGCCTTAGCCAGGTACGAGAGAAAAT
CACAGTTCTATTCACAGCGGGTATACCCTTGGTTGCAAGGAGCTGGAGCC
TGAACGGTTCCAACATGGAGACCAACTACGAGTCACTCTACCAAAGTCAA
CGGCGATTGCTAGATGCTTTCGCTGAGTTTGACCTACATTTCACGTCTTT
CCGCGTGACAAAATATCATCAGTTAAGCGAGAAGGAGCAATTGGGAGCAG
ATATCACCTACTTGCTTTACCTTGGTCACACTCTCACACTCAAAACTGTG
TTAATTCGTGGACCAGTGCCAGAGTCTCTGGTTCCGGAATTCCTTGCGCT
ACTTCAGGCCCATGAAGACATGATCGAGAAGCTCAAGTCCGTCTCGGGCC
TTGTAATGGACCACGTCATGATTGCCCACATGTACCTTGTGGCCACACAA
TGCCCAGACGTGGGGATTCGCATACGCGCTATTCGTCTTTTGCGGTCATG
GCCACATTACGAGGGCCTTCACAGCTCCAATGTCACTGCTCTGATGGCGT
TGGGTGCGCTCAAAAGGGACTTTCCCAATGAAGACAAGGCCTTGTCGATG
TTGCAGACGACTGACGCGGAGAATGAATTTCTCGTCGACTCCTTGGAGTC
TATCAAGAATGGCGTGGGAGAACCTACAATTCCGCTTTTCAGGATGTCTG
AGTTGCCGTCACGCCCATGAATGGCCCAGGTGCAGCTCATCTTATCCAGC
AAACACCGGAAGAGCGCCGGGAAGAGATCTAGGACAGGTTGTCGTACCTG
CCGAATCCGACGGATCAAATGCGATGAATCGCCAGGACAATGCAACAACT
GCGTCTCTGCTAACTGGACGTGCGACGGATACGATGCGTACCGGTTGCCG
CAGCGCCGAGGTCTACAGGATATAGGCACTCGGCTGGGTTGGATGATGAC
GTCGGATGAACACCGTTGTTATTCCTATTTTCAATATCGTTCCGTTACGA
ATCTGGCCGGGTTCTTCGACTCCCCACTCTGGCAGCAGTTGGCCCTACAG
ATGTCTCGCACTGATCCGGCTGTATTTCATGCGGTGAATATGTTGAGTGC
TGCGCACCAGGAGTCGGAATTGCATAATATGCAGATTTCTGCACGGTCAC
GCATTGGGAGCCAGCAGTATTACTTTTCTCTTCAGCAGTCCACGCGGGCC
ATCGCGCTCCTGAACCAGCGCCGGAACTCCCAGGATCCCCAGCTGCGCCA
AACCATCCTCCTGTGCTGTCTGCTCTTTGTTCTATTCGATGTGCTTGTCG
CGCAGTATGACAGTGCGTTCACGCATTTACACGGCGGTCTCCGTATTCTA
AAAGAACTCGAAATCCAAGGGAAGCTGGAGTCGGAGGTTGAGCCATCAAT
AGTTGCCGCATTTCGCCGCCTGGATACACAGGCCTCTCTCTATGATACTC
GGTTTCCGATCCTAAGCCTGGAGTATGGGAATCAATCCCCGCTTAAGTTG
TTCGAAGCACCAACAGGCGGCTTTACTAGCCTTAGCCAGGTACGAGAGAA
AATCACAGTTCTATTCACAGCGGGTATACCCTTGGTTGCAAGGAGCTGGA
GCCTGAACGGTTCCAACATGGAGACCAACTACGAGTCACTCTACCAAAGT
CAACGGCGATTGCTAGATGCTTTCGCTGAGTTTGACCTACATTTCACGTC
TTTCCGCGTGACAAAATATCATCAGTTAAGCGAGAAGGAGCAATTGGGAG
CAGATATCACCTACTTGCTTTACCTTGGTCACACTCTCACACTCAAAACT
GTGTTAATTCGTGGACCAGTGCCAGAGTCTCTGGTTCCGGAATTCCTTGC
GCTACTTCAGGCCCATGAAGACATGATCGAGAAGCTCAAGTCCGTCTCGG
GCCTTGTAATGGACCACGTCATGATTGCCCACATGTACCTTGTGGCCACA
CAATGCCCAGACGTGGGGATTCGCATACGCGCTATTCGTCTTTTGCGGTC
ATGGCCACATTACGAGGGCCTTCACAGCTCCAATGTCACTGCTCTGATGG
CGTTGGGTGCGCTCAAAAGGGACTTTCCCAATGAAGACAAGGCCTTGTCG
ATGTTGCAGACGACTGACGCGGAGAATGAATTTCTCGTCGACTCCTTGGA
GTCTATCAAGAATGGCGTGGGAGAACCTACAATTCCGCTTTTCAGGATGT
CTGAGTTGCCGTCACGCCCATGAATGGCCCAGGTGCAGCTCATCTTATCC
AGCAAACACCGGAAGAGCGCCGGGAAGAGATCTAGGACAGGTTGTCGTAC
CTGCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_234050M747DRAFT_234050Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_234050-T1M747DRAFT_234050-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_234050-T1.cdsM747DRAFT_234050-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_234050-T1.exon2M747DRAFT_234050-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_234050-T1.exon1M747DRAFT_234050-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:204241..205817 -
Powered by Drupal