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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851911.1:547472..549091+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_235271-T1 ID=M747DRAFT_235271-T1|Name=M747DRAFT_235271-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1620bp|location=Sequence derived from alignment at KZ851911.1:547472..549091+ (Aspergillus niger ATCC 13496)
ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA
GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA
AGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAG
GTACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCC
TTTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGG
AGGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCG
GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAA
TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA
CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG
CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG
GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC
TGCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTC
ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT
GGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGA
TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGTAGAAATTCCTCTTCGCA
AGTCCACTGTAGTTCATACTGACATTGCTCAGGGGCTATGCTATGCATCT
CGGTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCG
ATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTC
TTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGA
TAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTAT
CGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGAT
TATTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCT
GTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTA
GATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTT
AATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGGTTTGTTTTCGCGA
TTCTTGGGGCTGCCAGGTACTAATCGAATTCCGAGTTTAGCTGTTGAAGT
GTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCG
GTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGC
CTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGT
CGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGC
TTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAA
CGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATT
CGCGATGGGCTCTCTATTAA back to topCoding sequence (CDS) from alignment at KZ851911.1:547472..549091+ >M747DRAFT_235271-T1 ID=M747DRAFT_235271-T1|Name=M747DRAFT_235271-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4545bp|location=Sequence derived from alignment at KZ851911.1:547472..549091+ (Aspergillus niger ATCC 13496)
ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA
GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA
AGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAG
GTACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCC
TTTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGG
AGGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCG
GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAA
TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA
CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG
CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG
GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC
TGCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTC
ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT
GGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGA
TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGGGCTATGCTATGCATCTC
GGTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCGA
TGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTCT
TTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGAT
AAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTATC
GATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGATT
ATTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCTG
TCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTAG
ATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTTA
ATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGCTGTTGAAGTGTTTC
GAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCGGTATC
CACATACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGCCTTAT
ACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGTCGATA
CTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGCTTACT
GGACTTGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAACGCTT
ACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATTCGCGA
TGGGCTCTCTATTAAATGCGCCATCGACTCACAAAGCGTGCATGCGATGA
GTGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCT
GCCAGAGTGCCCAAAAGCAAGTCAACTGCACTTACCTGAAACCTGCGCGG
AGAAGGGGACCTAAGGTACGAAGGTATATCGGGGGTCAGGGATCGGAACA
CGCGACAACCGGTCCTTTGATCACTCCACATGTTGATCCGCGTGACGAGG
GGATAGCCCGTGTGGAGGTAGAGCAACATGTCTTGAGTACTATCCCAACA
GAAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGT
GTGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCA
CGCCAGATATTGGAACCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACC
ATGGCACAGCTGCAGCTTGCTCCGACAACTGTTGATAGCACGATGATGGC
GGCGGAGTGTATGAGGATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCT
TGGTCTCGTTCTTCCTGCATGTATATCATGCCAAGATCAACCAGAGGGAC
TCGGCCATGCGGTTCATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAA
GCTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTG
TTGCTAATAAAGAGATTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGGGC
TATGCTATGCATCTCGGTCTCGAACCATCATATACCAGTCCTATTCGCCT
ACCCGATGAGGTCGATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTG
AGCTTGGCAGACTCTTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGC
ACAAATTCCAGAGATAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGAC
GGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCA
CCCGCATTGCGGATTATTGCATCACGAAAGAATGGATGAGGACTATCATC
TGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCA
GCTCATGACATTTAGATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGT
CTCTACAAGGCTTTAATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAG
CTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCT
CACGCCATCGGTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACT
TTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTC
ATGTTGAAGTCGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGC
CCCCGCGCGCTTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACG
ATAAAGATAACGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAG
TACGTTGATTCGCGATGGGCTCTCTATTAAATGCGCCATCGACTCACAAA
GCGTGCATGCGATGAGTGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCT
GGCCCTGTGATACCTGCCAGAGTGCCCAAAAGCAAGTCAACTGCACTTAC
CTGAAACCTGCGCGGAGAAGGGGACCTAAGGTACGAAGGTATATCGGGGG
TCAGGGATCGGAACACGCGACAACCGGTCCTTTGATCACTCCACATGTTG
ATCCGCGTGACGAGGGGATAGCCCGTGTGGAGGTAGAGCAACATGTCTTG
AGTACTATCCCAACAGAAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCA
GGCGTCTTATAGTGTGTGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACA
AGCTTGAGCATGGCACGCCAGATATTGGAACCTTGTGTCTGGCCATGGCT
CTCTGTGCAGCCACCATGGCACAGCTGCAGCTTGCTCCGACAACTGTTGA
TAGCACGATGATGGCGGCGGAGTGTATGAGGATGCGTGAAGCGCACCTTG
ATTTGAGGAGCGTCTTGGTCTCGTTCTTCCTGCATGTATATCATGCCAAG
ATCAACCAGAGGGACTCGGCCATGCGGTTCATACGAGAGGCTGTGTATGG
CGCTAGGCTGTTGAAGCTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGC
TCGGTGCAGATGTTGTTGCTAATAAAGAGATTGTATTCCTCTTGCTCTGG
GTTTCTGAAAGGGGCTATGCTATGCATCTCGGTCTCGAACCATCATATAC
CAGTCCTATTCGCCTACCCGATGAGGTCGATGTGGGAGATAGCGCGGATG
CGAAAGGCCTGCTTGAGCTTGGCAGACTCTTTGCCACGTTCGATGGGTTT
TCGTCCGGAAGGAGCACAAATTCCAGAGATAAGCTAGTAATGACTGCGGA
TAGTCTTGCGAAGACGGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAG
GCGACCGACCTTCCACCCGCATTGCGGATTATTGCATCACGAAAGAATGG
ATGAGGACTATCATCTGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTC
GAAATCCGGTGCCCAGCTCATGACATTTAGATTCCCGGCGGTGGTTAGCC
GTGACCTTTTGATGTCTCTACAAGGCTTTAATGAGTCTGACTTGCTGCCT
TTGGGGCGCGACCAGCTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGC
GGATACTGTCCTGCTCACGCCATCGGTATCCACATACTCTGCCTTCCAGT
TAGGGCCACACGACTTTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTC
CTGGAGCAAGATCTCATGTTGAAGTCGATACTGCATAGTAAGACGGCTGA
GGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACTTGAACTATGACCCTT
GGTCATTCGATGACGATAAAGATAACGCTTACACTACCGAAGAGCATGTG
GACTCTCCTGAGCAGTACGTTGATTCGCGATGGGCTCTCTATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | C6 transcription factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851911.1 | supercontig | KZ851911.1:547472..549091 + |
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