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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851914.1:99858..101546+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_237281-T1 ID=M747DRAFT_237281-T1|Name=M747DRAFT_237281-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1689bp|location=Sequence derived from alignment at KZ851914.1:99858..101546+ (Aspergillus niger ATCC 13496)
ATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGCCTGA
GGCTAGTGCCTCGAAAATCGACACGTCGGAGTGGCCGCTTCTTCTGAAGA
ATTATGACAAGCGTACGTTCACTTCAAATCCACATCTCATATCAATGTAG
CTGGTGCTGATTTATAATATCAGTGCTTGTCAGGACCGGCCACTTCACGC
CAATTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATC
AACTCCGGTGTCATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGA
GGTTGTTGCTTGGATGAAGAGAATCCTGAGGTAAATCTTCTATTACGTTC
TCCTCTTGTCTTCACGATACTGAGACTAGTTTTGTAAAGGGCGGAGAAGA
CTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTC
TGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAA
GGAATACGTTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGG
CTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGG
CCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCA
CGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCT
GGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTG
GGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCG
CAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTCTACACGACGTTT
TGGACGCCCAATGGTTGTACGACAACCAGCGGGACGAGTCTTATTTGAGG
AAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGT
TGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGG
TCCCTGGTCTCCTCCGCTTCGGTAAGATCTTGTCTTCTCCATATGGTTCG
AATTGAATTGCTGACTCTGGTGAAGAGGCTGGTATTGAGGTCAACGAAGA
GGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTC
AAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAG
GTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTT
GGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGG
ATGTAAGCTATCCTATGGAATACTCACATATGTTCTGGCTTTGCTGACAA
ATAATGCAGAAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAA
GAACGACTACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAG
TGGCTCAACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACC
GAAACCCCTTCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACGA
GAAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCG
AGCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAG
TCCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGATTAA back to topCoding sequence (CDS) from alignment at KZ851914.1:99858..101546+ >M747DRAFT_237281-T1 ID=M747DRAFT_237281-T1|Name=M747DRAFT_237281-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7410bp|location=Sequence derived from alignment at KZ851914.1:99858..101546+ (Aspergillus niger ATCC 13496)
ATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGCCTGA
GGCTAGTGCCTCGAAAATCGACACGTCGGAGTGGCCGCTTCTTCTGAAGA
ATTATGACAAGCTGCTTGTCAGGACCGGCCACTTCACGCCAATTCCCGCT
GGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATCAACTCCGGTGT
CATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGAGGTTGTTGCTT
GGATGAAGAGAATCCTGAGGGCGGAGAAGACTGGTCACAGCGGAACCCTC
GACCCCAAGGTCACCGGTTGCTTGATTGTCTGCATTGACCGTGCTACTCG
CCTGGTGAAATCCCAACAGGGTGCCGGAAAGGAATACGTTTGCGTGATCC
GCCTACATGATAAGATCCCCGGTGGCGAGGCTCAGTTTAAGCGGGCTCTT
GAGACCTTGACTGGAGCCCTTTTCCAGCGGCCGCCATTGATCTCTGCTGT
TAAGCGTCAGCTTCGTATCCGGACAATTCACGAAAGCAAGCTTTACGAGT
TCGATAATGAGAGGCATCTTGGTGTCTTCTGGGTCAGCTGTGAAGCCGGA
ACGTACATCAGAACCCTTTGTGTCCACTTGGGTCTTTTGCTCGGTGTTGG
TGCGCACATGCAGGAACTTCGCCGTGTTCGCAGTGGTGCCATGGATGAGA
ACAGTGGAATGGTGACTCTACACGACGTTTTGGACGCCCAATGGTTGTAC
GACAACCAGCGGGACGAGTCTTATTTGAGGAAGGTCATCAAACCTCTGGA
GACTCTTCTCACCACGTACAAGCGTATCGTTGTCAAAGACAGTGCTGTTA
ACGCTGTATGCTATGGTGCTAAGCTTATGGTCCCTGGTCTCCTCCGCTTC
GGTAAGATCTTGTCTTCTCCATATGAGGCTGGTATTGAGGTCAACGAAGA
GGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTC
AAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAG
GTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTT
GGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGG
ATAAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAAGAACGAC
TACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAGTGGCTCA
ACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACCGAAACCC
CTTCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACGAGAAGAAG
AAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCGAGCGCAA
GCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAGTCCAAGC
AGGAGAAGGAAGAGAGCGACGATAGTGATTAAATGGCGGTCGCAGTGGCT
AAGGAGGAGATGGACTACTCAATCAAGCCTGAGGCTAGTGCCTCGAAAAT
CGACACGTCGGAGTGGCCGCTTCTTCTGAAGAATTATGACAAGCTGCTTG
TCAGGACCGGCCACTTCACGCCAATTCCCGCTGGTAGCACTCCTCTGAAG
CGTGACCTGAAGTCGTACATCAACTCCGGTGTCATCAACCTGGACAAGCC
TTCAAACCCCTCCAGTCATGAGGTTGTTGCTTGGATGAAGAGAATCCTGA
GGGCGGAGAAGACTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGT
TGCTTGATTGTCTGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACA
GGGTGCCGGAAAGGAATACGTTTGCGTGATCCGCCTACATGATAAGATCC
CCGGTGGCGAGGCTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCC
CTTTTCCAGCGGCCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTAT
CCGGACAATTCACGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATC
TTGGTGTCTTCTGGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTT
TGTGTCCACTTGGGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACT
TCGCCGTGTTCGCAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTC
TACACGACGTTTTGGACGCCCAATGGTTGTACGACAACCAGCGGGACGAG
TCTTATTTGAGGAAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTA
CAAGCGTATCGTTGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTG
CTAAGCTTATGGTCCCTGGTCTCCTCCGCTTCGGTAAGATCTTGTCTTCT
CCATATGAGGCTGGTATTGAGGTCAACGAAGAGGTAGTTCTCATGACCAC
TAAGGGTGAGGCTATTGCCATCGGTATCGCTCAAATGTCGACCGTTGAGC
TGTCCACCTGCGATCACGGCGTTGTGGCCAAGGTCAAGCGTTGTATCATG
GAACGCGACCTGTACCCGCGTCGCTGGGGTTTGGGGCCTGTGGCTTTGGA
GAAGAAGAAGCTCAAGTCCGCCGGAAAACTGGATAAATACGGTCGTGCTA
ACGAGGCTACGCCTGCTAAATGGAAGAACGACTACAAGGATTACAGCGCA
CCCGAAGAAGAAGGCGCACAGGCAGTGGCTCAACCTGTTGCTCAAGAAGA
AACCGCTACTCCTGCTGAGCAAACCGAAACCCCTTCTTCTCCCAACAAGA
TGGATGTTGATGACGACGACGACGAGAAGAAGAAGCGCAAGCGCCACGAA
GGTGAGACGCCCGAGGAACGGGCCGAGCGCAAGCGCAAGAAGAAGGAGAA
GAAGGAAAAGAAGGAGCGCCGGAAGTCCAAGCAGGAGAAGGAAGAGAGCG
ACGATAGTGATTAAATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTAC
TCAATCAAGCCTGAGGCTAGTGCCTCGAAAATCGACACGTCGGAGTGGCC
GCTTCTTCTGAAGAATTATGACAAGCTGCTTGTCAGGACCGGCCACTTCA
CGCCAATTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTAC
ATCAACTCCGGTGTCATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCA
TGAGGTTGTTGCTTGGATGAAGAGAATCCTGAGGGCGGAGAAGACTGGTC
ACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTCTGCATT
GACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAAGGAATA
CGTTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGGCTCAGT
TTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGGCCGCCA
TTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCACGAAAG
CAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCTGGGTCA
GCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTGGGTCTT
TTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCGCAGTGG
TGCCATGGATGAGAACAGTGGAATGGTGACTCTACACGACGTTTTGGACG
CCCAATGGTTGTACGACAACCAGCGGGACGAGTCTTATTTGAGGAAGGTC
ATCAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGTTGTCAA
AGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGGTCCCTG
GTCTCCTCCGCTTCGGTAAGATCTTGTCTTCTCCATATGAGGCTGGTATT
GAGGTCAACGAAGAGGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGC
CATCGGTATCGCTCAAATGTCGACCGTTGAGCTGTCCACCTGCGATCACG
GCGTTGTGGCCAAGGTCAAGCGTTGTATCATGGAACGCGACCTGTACCCG
CGTCGCTGGGGTTTGGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTC
CGCCGGAAAACTGGATAAATACGGTCGTGCTAACGAGGCTACGCCTGCTA
AATGGAAGAACGACTACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCA
CAGGCAGTGGCTCAACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGA
GCAAACCGAAACCCCTTCTTCTCCCAACAAGATGGATGTTGATGACGACG
ACGACGAGAAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAA
CGGGCCGAGCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCG
CCGGAAGTCCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGATTAAATGG
CGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGCCTGAGGCT
AGTGCCTCGAAAATCGACACGTCGGAGTGGCCGCTTCTTCTGAAGAATTA
TGACAAGCTGCTTGTCAGGACCGGCCACTTCACGCCAATTCCCGCTGGTA
GCACTCCTCTGAAGCGTGACCTGAAGTCGTACATCAACTCCGGTGTCATC
AACCTGGACAAGCCTTCAAACCCCTCCAGTCATGAGGTTGTTGCTTGGAT
GAAGAGAATCCTGAGGGCGGAGAAGACTGGTCACAGCGGAACCCTCGACC
CCAAGGTCACCGGTTGCTTGATTGTCTGCATTGACCGTGCTACTCGCCTG
GTGAAATCCCAACAGGGTGCCGGAAAGGAATACGTTTGCGTGATCCGCCT
ACATGATAAGATCCCCGGTGGCGAGGCTCAGTTTAAGCGGGCTCTTGAGA
CCTTGACTGGAGCCCTTTTCCAGCGGCCGCCATTGATCTCTGCTGTTAAG
CGTCAGCTTCGTATCCGGACAATTCACGAAAGCAAGCTTTACGAGTTCGA
TAATGAGAGGCATCTTGGTGTCTTCTGGGTCAGCTGTGAAGCCGGAACGT
ACATCAGAACCCTTTGTGTCCACTTGGGTCTTTTGCTCGGTGTTGGTGCG
CACATGCAGGAACTTCGCCGTGTTCGCAGTGGTGCCATGGATGAGAACAG
TGGAATGGTGACTCTACACGACGTTTTGGACGCCCAATGGTTGTACGACA
ACCAGCGGGACGAGTCTTATTTGAGGAAGGTCATCAAACCTCTGGAGACT
CTTCTCACCACGTACAAGCGTATCGTTGTCAAAGACAGTGCTGTTAACGC
TGTATGCTATGGTGCTAAGCTTATGGTCCCTGGTCTCCTCCGCTTCGGTA
AGATCTTGTCTTCTCCATATGAGGCTGGTATTGAGGTCAACGAAGAGGTA
GTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTCAAAT
GTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAGGTCA
AGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTTGGGG
CCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGGATAA
ATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAAGAACGACTACA
AGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAGTGGCTCAACCT
GTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACCGAAACCCCTTC
TTCTCCCAACAAGATGGATGTTGATGACGACGACGACGAGAAGAAGAAGC
GCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCGAGCGCAAGCGC
AAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAGTCCAAGCAGGA
GAAGGAAGAGAGCGACGATAGTGATTAAATGGCGGTCGCAGTGGCTAAGG
AGGAGATGGACTACTCAATCAAGCCTGAGGCTAGTGCCTCGAAAATCGAC
ACGTCGGAGTGGCCGCTTCTTCTGAAGAATTATGACAAGCTGCTTGTCAG
GACCGGCCACTTCACGCCAATTCCCGCTGGTAGCACTCCTCTGAAGCGTG
ACCTGAAGTCGTACATCAACTCCGGTGTCATCAACCTGGACAAGCCTTCA
AACCCCTCCAGTCATGAGGTTGTTGCTTGGATGAAGAGAATCCTGAGGGC
GGAGAAGACTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCT
TGATTGTCTGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGT
GCCGGAAAGGAATACGTTTGCGTGATCCGCCTACATGATAAGATCCCCGG
TGGCGAGGCTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTT
TCCAGCGGCCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGG
ACAATTCACGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGG
TGTCTTCTGGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTG
TCCACTTGGGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGC
CGTGTTCGCAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTCTACA
CGACGTTTTGGACGCCCAATGGTTGTACGACAACCAGCGGGACGAGTCTT
ATTTGAGGAAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTACAAG
CGTATCGTTGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAA
GCTTATGGTCCCTGGTCTCCTCCGCTTCGGTAAGATCTTGTCTTCTCCAT
ATGAGGCTGGTATTGAGGTCAACGAAGAGGTAGTTCTCATGACCACTAAG
GGTGAGGCTATTGCCATCGGTATCGCTCAAATGTCGACCGTTGAGCTGTC
CACCTGCGATCACGGCGTTGTGGCCAAGGTCAAGCGTTGTATCATGGAAC
GCGACCTGTACCCGCGTCGCTGGGGTTTGGGGCCTGTGGCTTTGGAGAAG
AAGAAGCTCAAGTCCGCCGGAAAACTGGATAAATACGGTCGTGCTAACGA
GGCTACGCCTGCTAAATGGAAGAACGACTACAAGGATTACAGCGCACCCG
AAGAAGAAGGCGCACAGGCAGTGGCTCAACCTGTTGCTCAAGAAGAAACC
GCTACTCCTGCTGAGCAAACCGAAACCCCTTCTTCTCCCAACAAGATGGA
TGTTGATGACGACGACGACGAGAAGAAGAAGCGCAAGCGCCACGAAGGTG
AGACGCCCGAGGAACGGGCCGAGCGCAAGCGCAAGAAGAAGGAGAAGAAG
GAAAAGAAGGAGCGCCGGAAGTCCAAGCAGGAGAAGGAAGAGAGCGACGA
TAGTGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001522 | pseudouridine synthesis |
| GO:0009451 | RNA modification |
| GO:0006396 | RNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0009982 | pseudouridine synthase activity |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926273Q |
| DBxref | InterPro:IPR020103 |
| DBxref | InterPro:IPR015947 |
| DBxref | InterPro:IPR004802 |
| DBxref | InterPro:IPR004521 |
| DBxref | InterPro:IPR032819 |
| DBxref | InterPro:IPR002501 |
| DBxref | InterPro:IPR012960 |
| DBxref | InterPro:IPR002478 |
| DBxref | PFAM:PF01509 |
| DBxref | PFAM:PF16198 |
| DBxref | PFAM:PF01472 |
| DBxref | PFAM:PF08068 |
| Product | centromere/microtubule-binding protein cbf5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851914.1 | supercontig | KZ851914.1:99858..101546 + |
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