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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851918.1:228551..230183- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_239090-T1 ID=M747DRAFT_239090-T1|Name=M747DRAFT_239090-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1633bp|location=Sequence derived from alignment at KZ851918.1:228551..230183- (Aspergillus niger ATCC 13496)
ATGTCATGGTCCAGCCCTGCAGCCCAGTATATTTACGTGCTTGTGATTCA
GTTACATTTGTGGTTTATCCTGAAGACAGCATTCTCACCGAGTAATCAAG
CCATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTC
CCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCAT
ATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAA
TTGTCGACGCGTTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCA
AATAACACTTACCATATCAACTCCGTTATGAACACGACATGGCTCGATGA
TGTGGAGATTGATCTACAGGGTACACTCTTGGTAAATAAATTACCTATGT
ATGTAATATTAGTTTCTTGTTTGTTTCTGACAATGACAGTGGAGCACCAA
CATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAAT
CCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGA
TACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAGATATGTTGGATC
GACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAA
TGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGTAG
GTATCGTTATTCATATTGCGCCATCTTGCTAAATGAATGCATGTAGCTAA
CAATACAGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTC
CATCTACGTGAACAATCTGTATGATGACGGCGGTTCAGCACGTTAGTACC
GTTCCGCATGTTGAATCGGGATGCAAGTCACGCCTCTGACCCTATTTAAA
TAGAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTA
ACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAA
TTCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCA
TTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAA
CGCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTA
CTTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCG
GCGGGGGTTTGGGATGTACGTCCGCGTAAATTTATCCAAGTCCTTTGTTG
ATTTTAACCATCCTACCATGGCAGATGCATCCGACATCGTCGCAACCAAC
TTGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTAC
GACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTC
GCGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTT
GCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGA
GAATGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAAGAGTATC
TGTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTG
TGTGTTGGGTCAAGTGCTACTGGGGGATGTTAG back to topCoding sequence (CDS) from alignment at KZ851918.1:228551..230183- >M747DRAFT_239090-T1 ID=M747DRAFT_239090-T1|Name=M747DRAFT_239090-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6960bp|location=Sequence derived from alignment at KZ851918.1:228551..230183- (Aspergillus niger ATCC 13496)
ATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGT
GCTCCATTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAA
CTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCT
CTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTT
GCCCCGTGTGAAGATATCACTATCGAGAATGTAAGTTTGCGAATAGCGGG
GAATACGACCCATGCAGAAGAGTATCTGTGTGGGAATGTGGATGGGACCG
TTGGGTTCAATTGCACTGGAGATGTGTGTGTTGGGTCAAGTGCTACTGGG
GGATGTTAGAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATC
ACATTAACGAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAA
AGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCC
TAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACT
GTTGAACGCCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGC
CGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATG
GAGGCGGCGGGGGTTTGGGATGACAATGTCTATCATTCACACCTCGAACT
CGTGGTTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGGTTCA
GCACTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCG
GCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTC
TTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTA
TAGATATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGA
CGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAG
AGCCAGATGTGATGTCATGGTCCAGCCCTGCAGCCCAGTATATTTACGTG
CTTGTGATTCAGTTACATTTGTGGTTTATCCTGAAGACAGCATTCTCACC
GAGTAATCAAGCCATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCT
CTCTCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCAT
GCAAGAACCATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGA
TGTGCCTGCAATTGTCGACGCGTTGACTACCTGTGGTTCCGGTGGTCGGG
TGATATTCTCAAATAACACTTACCATATCAACTCCGTTATGAACACGACA
TGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGATGCATCC
GACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATT
TACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCA
ATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACG
ACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTG
TGAAGATATCACTATCGAGAATGTAAGTTTGCGAATAGCGGGGAATACGA
CCCATGCAGAAGAGTATCTGTGTGGGAATGTGGATGGGACCGTTGGGTTC
AATTGCACTGGAGATGTGTGTGTTGGGTCAAGTGCTACTGGGGGATGTTA
GAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTAAC
GAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATT
CTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATT
GCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACG
CCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACT
TCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGC
GGGGGTTTGGGATGACAATGTCTATCATTCACACCTCGAACTCGTGGTTC
GATTCCATCTACGTGAACAATCTGTATGATGACGGCGGTTCAGCACTGGA
GCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAG
AATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGG
ACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAGATATG
TTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCG
GGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGAT
GTGATGTCATGGTCCAGCCCTGCAGCCCAGTATATTTACGTGCTTGTGAT
TCAGTTACATTTGTGGTTTATCCTGAAGACAGCATTCTCACCGAGTAATC
AAGCCATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATT
GTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAAC
CATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTG
CAATTGTCGACGCGTTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTC
TCAAATAACACTTACCATATCAACTCCGTTATGAACACGACATGGCTCGA
TGATGTGGAGATTGATCTACAGGGTACACTCTTGATGCATCCGACATCGT
CGCAACCAACTTGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCT
CTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAA
TTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTC
CTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATA
TCACTATCGAGAATGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCA
GAAGAGTATCTGTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCAC
TGGAGATGTGTGTGTTGGGTCAAGTGCTACTGGGGGATGTTAGAGAACAC
CGACGGTGCAAATACTATCTACAGCAAAAACATCACATTAACGAACTGGG
AAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGAT
ATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGG
GAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAA
TCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACC
TGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTT
GGGATGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCAT
CTACGTGAACAATCTGTATGATGACGGCGGTTCAGCACTGGAGCACCAAC
ATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATC
CACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGAT
ACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAGATATGTTGGATCG
ACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAAT
GGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGATGTC
ATGGTCCAGCCCTGCAGCCCAGTATATTTACGTGCTTGTGATTCAGTTAC
ATTTGTGGTTTATCCTGAAGACAGCATTCTCACCGAGTAATCAAGCCATG
GCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCCTTC
CATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATATGCG
AAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATTGTC
GACGCGTTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAA
CACTTACCATATCAACTCCGTTATGAACACGACATGGCTCGATGATGTGG
AGATTGATCTACAGGGTACACTCTTGATGCATCCGACATCGTCGCAACCA
ACTTGAAGACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGT
ACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGAT
TCGCGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATG
TTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATC
GAGAATGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAAGAGTA
TCTGTGTGGGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATG
TGTGTGTTGGGTCAAGTGCTACTGGGGGATGTTAGAGAACACCGACGGTG
CAAATACTATCTACAGCAAAAACATCACATTAACGAACTGGGAAGTCGTC
AACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGAT
CGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTG
GCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAAC
ATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGG
TGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGAC
AATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGA
ACAATCTGTATGATGACGGCGGTTCAGCACTGGAGCACCAACATCTCCTA
CTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCT
GGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGATACGGAACA
TTCAATGGAAGTGGCCAAACCTGGTATAGATATGTTGGATCGACGTCGAA
TTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAG
TCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGATGTCATGGTCCA
GCCCTGCAGCCCAGTATATTTACGTGCTTGTGATTCAGTTACATTTGTGG
TTTATCCTGAAGACAGCATTCTCACCGAGTAATCAAGCCATGGCACCTAT
AGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCCTTCCATCTCGC
TATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATATGCGAAGTCAAA
CCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATTGTCGACGCGTT
GACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACC
ATATCAACTCCGTTATGAACACGACATGGCTCGATGATGTGGAGATTGAT
CTACAGGGTACACTCTTGATGCATCCGACATCGTCGCAACCAACTTGAAG
ACCAACAACCTCAAAGGTGCTCCATTTACAATCTCTCAGTGTACGACGTT
CTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATC
TTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGC
TTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATCACTATCGAGAATGT
AAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAAGAGTATCTGTGTG
GGAATGTGGATGGGACCGTTGGGTTCAATTGCACTGGAGATGTGTGTGTT
GGGTCAAGTGCTACTGGGGGATGTTAGAGAACACCGACGGTGCAAATACT
ATCTACAGCAAAAACATCACATTAACGAACTGGGAAGTCGTCAACGGTGA
TGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACT
GCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATAT
AATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATA
TGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGG
TCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATGACAATGTCTA
TCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTG
TATGATGACGGCGGTTCAGCACTGGAGCACCAACATCTCCTACTGGCTTA
ACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTG
GGTGGCAAAGACATTGTCTTTGAAGGACATGGATACGGAACATTCAATGG
AAGTGGCCAAACCTGGTATAGATATGTTGGATCGACGTCGAATTACCCAC
GGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAG
GGGTTGCGATTCGTGCAGAGCCAGATGTGATGTCATGGTCCAGCCCTGCA
GCCCAGTATATTTACGTGCTTGTGATTCAGTTACATTTGTGGTTTATCCT
GAAGACAGCATTCTCACCGAGTAATCAAGCCATGGCACCTATAGCGTTGA
AAATCCTCCTCTTTACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGAC
CAAGCGAGGAATGGTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGG
ATCCTCAGAAATTGATGATGTGCCTGCAATTGTCGACGCGTTGACTACCT
GTGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTACCATATCAAC
TCCGTTATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGG
TACACTCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF00295 |
| Product | pectin lyase-like protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851918.1 | supercontig | KZ851918.1:228551..230183 - |
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