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M747DRAFT_241967-T1, M747DRAFT_241967-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_241967-T1
Unique NameM747DRAFT_241967-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851927.1:58363..59094+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_241967-T1 ID=M747DRAFT_241967-T1|Name=M747DRAFT_241967-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=732bp|location=Sequence derived from alignment at KZ851927.1:58363..59094+ (Aspergillus niger ATCC 13496)
GTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCG
TTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTGTCG
AGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCTCAG
ATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGCTTA
CTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGCACC
AGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCATGCC
GACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAGGCA
CCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAAGTATGTTGG
AACCTTCGCTGGCTTAGGATGAAATGTGCTGGCGTGCTAACGTGCTACCA
GGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAA
CGTCGAGCTTGCTTTCCAGAACATCCTGACAGGTTAGACTTGCCCCCGGT
CCTCAGTTTACCAGACGAATTCCGTCATGCTGACGTTCTTGTCACCTTTA
GAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGG
CCAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGG
AGGACCCGAAGACCAAGCAGGGATGCTGTTAA
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Coding sequence (CDS) from alignment at KZ851927.1:58363..59094+

>M747DRAFT_241967-T1 ID=M747DRAFT_241967-T1|Name=M747DRAFT_241967-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1809bp|location=Sequence derived from alignment at KZ851927.1:58363..59094+ (Aspergillus niger ATCC 13496)
GTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCG
TTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTGTCG
AGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCTCAG
ATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGCTTA
CTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGCACC
AGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCATGCC
GACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAGGCA
CCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAAGCGAGAACA
ACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTT
GCTTTCCAGAACATCCTGACAGAAATCTACCGTATCGTCTCCAGCAAGGC
TCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACA
TGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGT
TAAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAG
TCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTG
TCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCT
CAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGC
TTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGC
ACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCAT
GCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAG
GCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAAGCGAGA
ACAACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAG
CTTGCTTTCCAGAACATCCTGACAGAAATCTACCGTATCGTCTCCAGCAA
GGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCG
ACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGC
TGTTAAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTT
GAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCG
GTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAG
GCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTC
CGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTA
AGCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGAT
CATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTT
GAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAAGCG
AGAACAACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTC
GAGCTTGCTTTCCAGAACATCCTGACAGAAATCTACCGTATCGTCTCCAG
CAAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCC
GCGACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGA
TGCTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAB11AM747DRAFT_241967Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_241967-T1.exon1M747DRAFT_241967-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_241967-T1.exon2M747DRAFT_241967-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_241967-T1.exon3M747DRAFT_241967-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_241967-T1.cdsM747DRAFT_241967-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_241967-T1M747DRAFT_241967-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductRas- protein Rab-11A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851927.1supercontigKZ851927.1:58363..59094 +
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