You are here

Home

M747DRAFT_252118-T1, M747DRAFT_252118-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_252118-T1
Unique NameM747DRAFT_252118-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1049622..1050502+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_252118-T1 ID=M747DRAFT_252118-T1|Name=M747DRAFT_252118-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=881bp|location=Sequence derived from alignment at KZ851900.1:1049622..1050502+ (Aspergillus niger ATCC 13496)
GAGCTCAAAAGATCTTGTCTCATCACTGCTATACTGGCATACTACTGCAT
CCATTTACCACTGCATTCTCCCACAACCACGACCTTAATCACTCTATACG
CACACTTACACAAGTAAATTCACAATGGGTATCTTCGGCGGCTCTTCTTC
CCCCTCCACCGACGCCTCCAGCAAGGAAGTCAAGGAGGCCCTTTTCAAGC
AAGTCCAGGCCGAATCCGCCATGAGCAACGCCCGCACTCTGATCACCGTA
CGTTACTTCATCCTTCTTCAGGAAATTTCATTCAAGATTGCGCTGACCAT
TCTATCTGCCATCTAGAACGTCAACGAACACTGCTTCGAAGCCTGCGTTC
CCACTCCCGGAACGACCATGTCCGCCGGCGAACAGGCCTGCCTGACCGAC
TGCATGGAGAAGTACATCGCCTTCTGGAACACCGTTAGCCGGACATACAC
CCGTCGCGTGGGCACCGAGCAGAAGAAGATGCTTTCGCTGTGATTTGCTG
CCATATATTCTTCTTCGTTGATATCCGTGCTGGTTGGGAGTGGTTGGATT
TAGGCGGACCACTTCTCTTCCATGTGTTTGGCCATGTGTTGATCTGATCT
AGAGGTGTTTTTGACCGGTATACCTTGGTGTGATATGAGGCAGTGGCCAT
TGGTGTGATGATCTTTGTGTATATTACGGACGGACGGTTTTGGTTCGGGC
AGCCGGTGGCGTTTTGAAAAGACAAGAGCCTTGAATGGCAGGCTATGCTT
ATGATACAGTTGAGGGACCAGCGTCCACTTATCCAAGACTACTTTTATTG
CAATGGCCAAATCGAATATGTACATTATACAACTGCCGCCACAGGGACAG
GGAAAGGCATAAACGGAAAGATGACATCAAG
back to top

Coding sequence (CDS) from alignment at KZ851900.1:1049622..1050502+

>M747DRAFT_252118-T1 ID=M747DRAFT_252118-T1|Name=M747DRAFT_252118-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=600bp|location=Sequence derived from alignment at KZ851900.1:1049622..1050502+ (Aspergillus niger ATCC 13496)
ATGGGTATCTTCGGCGGCTCTTCTTCCCCCTCCACCGACGCCTCCAGCAA
GGAAGTCAAGGAGGCCCTTTTCAAGCAAGTCCAGGCCGAATCCGCCATGA
GCAACGCCCGCACTCTGATCACCAACGTCAACGAACACTGCTTCGAAGCC
TGCGTTCCCACTCCCGGAACGACCATGTCCGCCGGCGAACAGGCCTGCCT
GACCGACTGCATGGAGAAGTACATCGCCTTCTGGAACACCGTTAGCCGGA
CATACACCCGTCGCGTGGGCACCGAGCAGAAGAAGATGCTTTCGCTGTGA
ATGGGTATCTTCGGCGGCTCTTCTTCCCCCTCCACCGACGCCTCCAGCAA
GGAAGTCAAGGAGGCCCTTTTCAAGCAAGTCCAGGCCGAATCCGCCATGA
GCAACGCCCGCACTCTGATCACCAACGTCAACGAACACTGCTTCGAAGCC
TGCGTTCCCACTCCCGGAACGACCATGTCCGCCGGCGAACAGGCCTGCCT
GACCGACTGCATGGAGAAGTACATCGCCTTCTGGAACACCGTTAGCCGGA
CATACACCCGTCGCGTGGGCACCGAGCAGAAGAAGATGCTTTCGCTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_252118M747DRAFT_252118Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252118-T1.utr5p1M747DRAFT_252118-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252118-T1.exon1M747DRAFT_252118-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_252118-T1.exon2M747DRAFT_252118-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252118-T1.cdsM747DRAFT_252118-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252118-T1.utr3p1M747DRAFT_252118-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252118-T1M747DRAFT_252118-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265PJ3
DBxrefInterPro:IPR035427
DBxrefInterPro:IPR004217
DBxrefPFAM:PF02953
Productimport inner membrane translocase subunit tim13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1049622..1050502 +
Powered by Drupal