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M747DRAFT_252189-T1, M747DRAFT_252189-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_252189-T1
Unique NameM747DRAFT_252189-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1163125..1165971-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_252189-T1 ID=M747DRAFT_252189-T1|Name=M747DRAFT_252189-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2847bp|location=Sequence derived from alignment at KZ851900.1:1163125..1165971- (Aspergillus niger ATCC 13496)
TCGGCATTTATATTTATACTCCTTCCCCAGGATTGTCTGGTCGCATTTCT
TGAGATTGGCTGGTCCAGATCAAGCTCCTATCGTTTCTTCTTATCGGTCC
ATCTACACTACTCTGTATTAACAGCCTTAATCGCCCTGCACCACTTGCGA
CCGTCTCCCGCCTCCCGTCCACCCTTCTCCGTCCTCCGCCCCGGTCATTT
GGCAACTTACTCAACCTTACTCAAACAACCCTCTCTCCTCCTCAGGGTCC
TCACCATTCCAACTACCTCGCCACCACCTTCCGTCTCTTTATTTCTGCGC
CAGAAATCTGTCGCAGAAATAGTATCCTTTGAAGACATACAGCCTGGTGC
TATCCACAACTGCGCTTCTAGTTCGCTGGTTACAGTAGCCGAGGCCACGC
TAGCGAGCGAGTAGCGGCGCTGCGGTTCCAGTGGCACGACTTCGGACTGC
CGTCGCGTGAGAGCATCTACCAGAATTCTTCATTCAGCAAGATGGAAAGC
ACACGGCCTCAGGAGGACAAAACCATGTCCTCCCCTCCGCCCTTCACATC
GATCTTCGGTGGCCCCGCCGAGTCCGCGGAGGAGATCGATGCTGATGCCG
ACAATAGCCAGCTGAAGCCCCACAATCGCAGCAACGTAACAGCAACTTCG
GCCAAGCTCGTGGGCAAAAGTGTCGCCCCTTTCCTCGCAAAGCACGTTCC
CGACCAATACGCCCCCCTCGGATCGCAAAATAGAGAACCTGCCGCCTTGA
GCAGCGCAAATTCCCGCTATTGCTACCGACATCGCCCAGACCGTAAGTGC
CGCCGGCAGGCCGACGAACCGACAATGGACAAATTGCAACGGGTATGTCT
TCTACCAATATCATCCGAAGGACCAAGCAGAAAATGTCTGCCATTTATGA
TCGTGGACTAACGGGTACCCAGGAGTTGGAGTCGCTCCCTCAGAGTGATC
AGCAGGGCATTGCGCATGTTTGGTCGCTCTTCTCAGCCGCCCCAGCCAAG
CACCGAAAACTCATACTCCAGGGAATTATGGCTCAATGCTGCTTCCCGCA
ACTCTCGTTCATTTCCACCACCGTCCGTGACCTCATCCGAATCGATTTCA
TTGCCGCTCTTCCTCCGGAGATCTCTTTCAAAATCCTGTGTTACCTGGAC
ACCACTTCTCTTTGCAAAGCTGCACAAGTCTCGCGACGTTGGAGGGCACT
GGCCGACGACGACGTGGTCTGGCATCGCATGTGCGAGCAACATATTCATC
GCAAGTGCAAGAAATGTGGCTGGGGACTTCCCCTTTTGGATCGGAAGAGG
CTCCGTGAATCGAAGCGCGAGATTGAGATTCGCGCTACGACCTGGGACGT
CAACGGCACGTCTCCGAAAGCGACTCCTGCGCTCCCTGAAGATGCTTCGC
CTGTCGCCGACAGCTCTGGTACCGGTAAACGAAAGCCTGAGCCAAGCGAG
GAAGAGACTGCGGTCGTCAAACGCCACTGTCAGTCACTAGCGATGCGCCC
AGAAGGAAGCGAAGATTATTTCAAAACCCGATACAGGCCTTGGAAGGAGG
TGTACAAGGATCGTTTCAAAGTGGGCACAAACTGGAAGTACGGACGCTGT
TCGATCAGAATCTTCAAAGGCCATACGAATGGCGTGATGTGCTTGCAATT
CGAGGACAACATCCTGGCAACCGGATCTTACGACGCGACGATTAAGATTT
GGGATACCGACACTGGCCAGGAAATTCGTACTCTTCGGGGACACGAGTCG
GGTATCCGCTGCCTGCAGTTTGATGACACGAAGTTGATCAGTGGTAGTAT
GGATGGCAGCGTGAAAGTCTGGAACTGGCGCACTGGCGATTGCATTTCCA
CGTATACTGGTCATCGTGGCGGAGTAATCGGGCTGCACTTCGATGCTACT
ATTCTCGCGTCCGCATCTGTTGATAAGACCGTGAAGATCTGGAATTTCGA
GGACAAATCAACTTGCCTCTTACGAGGACACACGGACTGGGTCAACGCGG
TCCGGGTCGATACGGCTTCTCGCACGGTGTTCTCGGCGTCCGACGACTGC
ACCGTTCGGCTTTGGGATTTGGATACCAAGTCTTGCATTCGGACATTCCA
TGGCCATGTGGGACAGGTTCAACAAGTGGTTCCTCTTCCCCGGGAATTTG
AATTTGAAGAGCATGATGTTGAGTGTGAGAACGACAACCTCAGCACTGTC
TCCGGCGACACCGAGCCGGCATCTCTTCAGGCCACGCTTGGCCTCGAGTC
GAATGCGGTTATTTCTCAGAGTTCACCGTTTGGTCCTTCTTTTGAGTCAG
GCCGGACAGCACCACCGCGCTACATTGTTACTAGCGCCTTGGACTCGACC
ATCCGTTTATGGGAGACTAGCACTGGCCGGTGCTTGCGTACGTTCTTTGG
CCATCTGGAGGGTGTCTGGGCCCTGGCAGCGGATACACTGCGTATTGTTT
CTGGGGCCGAGGACCGGATGATCAAGATCTGGGATCCGCGAACCGGCAAG
TGTGAGCGCACGTTCACCGGCCACTCCGGCCCTGTCACCTGCATCGGACT
TGGCGACAGTCGGTTTGCTACTGGTAGTGAGGACTGCGAAGTGCGCATGT
ACAGCTTTCAGAGCTGATCTGGACATGCTTTATATTGGTGTTGTTTCTTC
TGGCCTTTGATGCTGGCTTAATGTTCTTTCTGATGATGAATACCCTTGAC
TAGCGCAGTTACTTTTTTTGATTGGATGGGTCTGGCTGGCAGAGGGATGG
AGCATTTTTTTTAAACACTTATGATGGGGTTTCGGGCGTTGTGATTTCAA
AATGTGTACTTTAGCTACAGAACGATTAATCTACCGCATCAGTCTGC
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Coding sequence (CDS) from alignment at KZ851900.1:1163125..1165971-

>M747DRAFT_252189-T1 ID=M747DRAFT_252189-T1|Name=M747DRAFT_252189-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4092bp|location=Sequence derived from alignment at KZ851900.1:1163125..1165971- (Aspergillus niger ATCC 13496)
GAGTTGGAGTCGCTCCCTCAGAGTGATCAGCAGGGCATTGCGCATGTTTG
GTCGCTCTTCTCAGCCGCCCCAGCCAAGCACCGAAAACTCATACTCCAGG
GAATTATGGCTCAATGCTGCTTCCCGCAACTCTCGTTCATTTCCACCACC
GTCCGTGACCTCATCCGAATCGATTTCATTGCCGCTCTTCCTCCGGAGAT
CTCTTTCAAAATCCTGTGTTACCTGGACACCACTTCTCTTTGCAAAGCTG
CACAAGTCTCGCGACGTTGGAGGGCACTGGCCGACGACGACGTGGTCTGG
CATCGCATGTGCGAGCAACATATTCATCGCAAGTGCAAGAAATGTGGCTG
GGGACTTCCCCTTTTGGATCGGAAGAGGCTCCGTGAATCGAAGCGCGAGA
TTGAGATTCGCGCTACGACCTGGGACGTCAACGGCACGTCTCCGAAAGCG
ACTCCTGCGCTCCCTGAAGATGCTTCGCCTGTCGCCGACAGCTCTGGTAC
CGGTAAACGAAAGCCTGAGCCAAGCGAGGAAGAGACTGCGGTCGTCAAAC
GCCACTGTCAGTCACTAGCGATGCGCCCAGAAGGAAGCGAAGATTATTTC
AAAACCCGATACAGGCCTTGGAAGGAGGTGTACAAGGATCGTTTCAAAGT
GGGCACAAACTGGAAGTACGGACGCTGTTCGATCAGAATCTTCAAAGGCC
ATACGAATGGCGTGATGTGCTTGCAATTCGAGGACAACATCCTGGCAACC
GGATCTTACGACGCGACGATTAAGATTTGGGATACCGACACTGGCCAGGA
AATTCGTACTCTTCGGGGACACGAGTCGGGTATCCGCTGCCTGCAGTTTG
ATGACACGAAGTTGATCAGTGGTAGTATGGATGGCAGCGTGAAAGTCTGG
AACTGGCGCACTGGCGATTGCATTTCCACGTATACTGGTCATCGTGGCGG
AGTAATCGGGCTGCACTTCGATGCTACTATTCTCGCGTCCGCATCTGTTG
ATAAGACCGTGAAGATCTGGAATTTCGAGGACAAATCAACTTGCCTCTTA
CGAGGACACACGGACTGGGTCAACGCGGTCCGGGTCGATACGGCTTCTCG
CACGGTGTTCTCGGCGTCCGACGACTGCACCGTTCGGCTTTGGGATTTGG
ATACCAAGTCTTGCATTCGGACATTCCATGGCCATGTGGGACAGGTTCAA
CAAGTGGTTCCTCTTCCCCGGGAATTTGAATTTGAAGAGCATGATGTTGA
GTGTGAGAACGACAACCTCAGCACTGTCTCCGGCGACACCGAGCCGGCAT
CTCTTCAGGCCACGCTTGGCCTCGAGTCGAATGCGGTTATTTCTCAGAGT
TCACCGTTTGGTCCTTCTTTTGAGTCAGGCCGGACAGCACCACCGCGCTA
CATTGTTACTAGCGCCTTGGACTCGACCATCCGTTTATGGGAGACTAGCA
CTGGCCGGTGCTTGCGTACGTTCTTTGGCCATCTGGAGGGTGTCTGGGCC
CTGGCAGCGGATACACTGCGTATTGTTTCTGGGGCCGAGGACCGGATGAT
CAAGATCTGGGATCCGCGAACCGGCAAGTGTGAGCGCACGTTCACCGGCC
ACTCCGGCCCTGTCACCTGCATCGGACTTGGCGACAGTCGGTTTGCTACT
GGTAGTGAGGACTGCGAAGTGCGCATGTACAGCTTTCAGAGCTGAATGGA
AAGCACACGGCCTCAGGAGGACAAAACCATGTCCTCCCCTCCGCCCTTCA
CATCGATCTTCGGTGGCCCCGCCGAGTCCGCGGAGGAGATCGATGCTGAT
GCCGACAATAGCCAGCTGAAGCCCCACAATCGCAGCAACGTAACAGCAAC
TTCGGCCAAGCTCGTGGGCAAAAGTGTCGCCCCTTTCCTCGCAAAGCACG
TTCCCGACCAATACGCCCCCCTCGGATCGCAAAATAGAGAACCTGCCGCC
TTGAGCAGCGCAAATTCCCGCTATTGCTACCGACATCGCCCAGACCGTAA
GTGCCGCCGGCAGGCCGACGAACCGACAATGGACAAATTGCAACGGGAGT
TGGAGTCGCTCCCTCAGAGTGATCAGCAGGGCATTGCGCATGTTTGGTCG
CTCTTCTCAGCCGCCCCAGCCAAGCACCGAAAACTCATACTCCAGGGAAT
TATGGCTCAATGCTGCTTCCCGCAACTCTCGTTCATTTCCACCACCGTCC
GTGACCTCATCCGAATCGATTTCATTGCCGCTCTTCCTCCGGAGATCTCT
TTCAAAATCCTGTGTTACCTGGACACCACTTCTCTTTGCAAAGCTGCACA
AGTCTCGCGACGTTGGAGGGCACTGGCCGACGACGACGTGGTCTGGCATC
GCATGTGCGAGCAACATATTCATCGCAAGTGCAAGAAATGTGGCTGGGGA
CTTCCCCTTTTGGATCGGAAGAGGCTCCGTGAATCGAAGCGCGAGATTGA
GATTCGCGCTACGACCTGGGACGTCAACGGCACGTCTCCGAAAGCGACTC
CTGCGCTCCCTGAAGATGCTTCGCCTGTCGCCGACAGCTCTGGTACCGGT
AAACGAAAGCCTGAGCCAAGCGAGGAAGAGACTGCGGTCGTCAAACGCCA
CTGTCAGTCACTAGCGATGCGCCCAGAAGGAAGCGAAGATTATTTCAAAA
CCCGATACAGGCCTTGGAAGGAGGTGTACAAGGATCGTTTCAAAGTGGGC
ACAAACTGGAAGTACGGACGCTGTTCGATCAGAATCTTCAAAGGCCATAC
GAATGGCGTGATGTGCTTGCAATTCGAGGACAACATCCTGGCAACCGGAT
CTTACGACGCGACGATTAAGATTTGGGATACCGACACTGGCCAGGAAATT
CGTACTCTTCGGGGACACGAGTCGGGTATCCGCTGCCTGCAGTTTGATGA
CACGAAGTTGATCAGTGGTAGTATGGATGGCAGCGTGAAAGTCTGGAACT
GGCGCACTGGCGATTGCATTTCCACGTATACTGGTCATCGTGGCGGAGTA
ATCGGGCTGCACTTCGATGCTACTATTCTCGCGTCCGCATCTGTTGATAA
GACCGTGAAGATCTGGAATTTCGAGGACAAATCAACTTGCCTCTTACGAG
GACACACGGACTGGGTCAACGCGGTCCGGGTCGATACGGCTTCTCGCACG
GTGTTCTCGGCGTCCGACGACTGCACCGTTCGGCTTTGGGATTTGGATAC
CAAGTCTTGCATTCGGACATTCCATGGCCATGTGGGACAGGTTCAACAAG
TGGTTCCTCTTCCCCGGGAATTTGAATTTGAAGAGCATGATGTTGAGTGT
GAGAACGACAACCTCAGCACTGTCTCCGGCGACACCGAGCCGGCATCTCT
TCAGGCCACGCTTGGCCTCGAGTCGAATGCGGTTATTTCTCAGAGTTCAC
CGTTTGGTCCTTCTTTTGAGTCAGGCCGGACAGCACCACCGCGCTACATT
GTTACTAGCGCCTTGGACTCGACCATCCGTTTATGGGAGACTAGCACTGG
CCGGTGCTTGCGTACGTTCTTTGGCCATCTGGAGGGTGTCTGGGCCCTGG
CAGCGGATACACTGCGTATTGTTTCTGGGGCCGAGGACCGGATGATCAAG
ATCTGGGATCCGCGAACCGGCAAGTGTGAGCGCACGTTCACCGGCCACTC
CGGCCCTGTCACCTGCATCGGACTTGGCGACAGTCGGTTTGCTACTGGTA
GTGAGGACTGCGAAGTGCGCATGTACAGCTTTCAGAGCTGAATGGAAAGC
ACACGGCCTCAGGAGGACAAAACCATGTCCTCCCCTCCGCCCTTCACATC
GATCTTCGGTGGCCCCGCCGAGTCCGCGGAGGAGATCGATGCTGATGCCG
ACAATAGCCAGCTGAAGCCCCACAATCGCAGCAACGTAACAGCAACTTCG
GCCAAGCTCGTGGGCAAAAGTGTCGCCCCTTTCCTCGCAAAGCACGTTCC
CGACCAATACGCCCCCCTCGGATCGCAAAATAGAGAACCTGCCGCCTTGA
GCAGCGCAAATTCCCGCTATTGCTACCGACATCGCCCAGACCGTAAGTGC
CGCCGGCAGGCCGACGAACCGACAATGGACAAATTGCAACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_252189M747DRAFT_252189Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252189-T1M747DRAFT_252189-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252189-T1.cdsM747DRAFT_252189-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252189-T1.utr3p1M747DRAFT_252189-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252189-T1.exon2M747DRAFT_252189-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_252189-T1.exon1M747DRAFT_252189-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_252189-T1.utr5p1M747DRAFT_252189-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09260KIY
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductE3 ubiquitin ligase complex SCF subunit sconB
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1163125..1165971 -
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