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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851905.1:655437..656692- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_255357-T1 ID=M747DRAFT_255357-T1|Name=M747DRAFT_255357-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1256bp|location=Sequence derived from alignment at KZ851905.1:655437..656692- (Aspergillus niger ATCC 13496)
ATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTC
AGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCG
AGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCC
AACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAA
TGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCT
CCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTG
GGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGT
CAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACA
ACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTC
ACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGG
GAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGC
CGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGA
GGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTGTACTTCCCCC
TCCCTCCCCCTCAACCCTATCCCCCCCAACCACAATACTAACAAGTAAAC
CCAGATCTACATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTC
TCGCGGGCCAAACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAA
TCATCCCAGATCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAA
GGGCACCAACACAACAGTCCGGAACAACTACGGCGTATACATCCACGACT
CGACCGTAAACGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCC
TGCGCCCTAGGCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAA
CACATACGAAGACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGG
ATCGGTGGAGTAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGG
CCAGGATTCAACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATT
GAGTAGCAGCGAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGT
TCGAGGATGGAAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTC
TCCTCT back to topCoding sequence (CDS) from alignment at KZ851905.1:655437..656692- >M747DRAFT_255357-T1 ID=M747DRAFT_255357-T1|Name=M747DRAFT_255357-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2382bp|location=Sequence derived from alignment at KZ851905.1:655437..656692- (Aspergillus niger ATCC 13496)
ATCTACATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGC
GGGCCAAACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCAT
CCCAGATCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGC
ACCAACACAACAGTCCGGAACAACTACGGCGTATACATCCACGACTCGAC
CGTAAACGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCG
CCCTAGGCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACA
TACGAAGACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCG
GTGGAGTAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAG
GATTCAACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGT
AGCAGCGAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGTTCGA
GGATGGAAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCT
CTATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCC
TCAGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCG
CGAGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCT
CCAACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATC
AATGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGG
CTCCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCC
TGGGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACC
GTCAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGA
CAACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTC
TCACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTC
GGGAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGC
GCCGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATG
GAGGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTATCTACATC
GGCAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGCGGGCCAAAC
CGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCATCCCAGATCG
TCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGCACCAACACA
ACAGTCCGGAACAACTACGGCGTATACATCCACGACTCGACCGTAAACGC
AGCGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCGCCCTAGGCA
GACCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACATACGAAGAC
GGGAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCGGTGGAGTAA
AAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAGGATTCAACC
TCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGCGAG
GAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGTTCGAGGATGGAAG
GGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCTCTATGCTCC
TCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTCAGCAGCC
ATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCGAGAAATG
CCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCCAACACCC
ACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAATGCCCTC
CCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCTCCTACAA
TGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTGGGCCAGC
AGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGTCAACCTC
ACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACAACGTCTG
GTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTCACCGGCT
CCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGGGAACACT
GATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGCCGTACTC
TGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGAGGGTTTT
ACTACTGCGGGTTCTACTCTTACCAGGATACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042545 | cell wall modification |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030599 | pectinesterase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:CE8 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000070 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF01095 |
| Product | pectin lyase-like protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851905.1 | supercontig | KZ851905.1:655437..656692 - |
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