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M747DRAFT_256144-T1, M747DRAFT_256144-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_256144-T1
Unique NameM747DRAFT_256144-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:90549..91809+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_256144-T1 ID=M747DRAFT_256144-T1|Name=M747DRAFT_256144-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1261bp|location=Sequence derived from alignment at KZ851907.1:90549..91809+ (Aspergillus niger ATCC 13496)
CTTTTTCTCCTTTCCAAATCTGATTGATTATACCTATACGTTTCTATCAT
CAACCCCGCCAGTCTCCTTCCAAGATGCCGCTCGAAGCTACCATGATCAT
GTCCGTTTAGCCACCTTCATCCCAAGCTCTGTGCGCACCTACTAACGCCA
TCTACAGTGTCGACAATAGCGAAAGCAGCAGAAATGGAGATTATACGTAA
GTTAACTGTTCTAAATCGCCCAGAATCGACCGTCTGGTTCCGCCTCTAAC
AGCTGCCAGCTCGACACGATGGCAAGCTCAGATCGACGCCGTGAGCGTCA
TTCACACCACTAAGATGCGCGTGCACCCTCAGTCTGCTGTCGGTCTTATG
AGCATGGGCGGAAAAGGTCCCGAGGTCCTTTCGACATTTACTTCCGACTT
TGGTGGTATCCTGGCCGGTCTGCATCGCACGAAGATCCATGGCACTGCCC
ACCTTAGCTCCAGCATACAAGTGGCCGGTGTATGTTCAAACGACTCCATC
ATCTCTTCAGATAGATACTGTACGGGATTGATTGCATTGCTAACCTGATG
ATTGGCGCAGCTTGCCCTCAAACACCGCTCCGAGAAGTCCCAGAGACAGC
GCATCATCGTGTTCTCCTGCTCTCCCATCGAAGAAGACGAGAAGACATTA
GTGAAGCTGGCCAAGAAGATGAAGAAGAACAACGTGTCCATCGATGTAAT
TGCCTTTGGAGATCTGGAATCCGATCAGACCAAGAAACTAGAGGCCTTCG
TCGAGAACGTCAAGGGTGGTGACGGCTCTAACCTCGCCATCATTCCCCCG
GGCCCCAACTTGCTGAGTGAGGAGCTTCAGGTTACTCCCATTCTGGGCGG
GGACAGCTCCGGTGCCGATGGTGCAGGTCCTGAAGGCGGCGATGGTGCCT
TTGGGTTCGAGGATGCGGCTGAGAACGACCCCGAACTGGCATTCGCCCTC
CGTCTATCTTTGGAAGAGGAGAAGAACCGGCAAGAGAAGGAAAAGCGCGA
CCGGGAGGAGCAAGAGCGCAAAGCCAACCTGGACAACATTCCCGAGGAGG
GCTCCAGTGGGAGCAAAGACAAGAAAGAGGATGGTGACAAGATGGACACT
GCTTAATGTGGAGACCAGAACAACCTCCTGGATGATTTGATGCATACCCG
GCGTTTTTAAATGTACTTGCGTTTTCTTGCTGTAATTGTAGAAAGCGGCT
GGTTCCCCAGCAACACGCTTTTGAAACAGATGCGATCTAATATGCAGATC
TATCGCCATCG
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Coding sequence (CDS) from alignment at KZ851907.1:90549..91809+

>M747DRAFT_256144-T1 ID=M747DRAFT_256144-T1|Name=M747DRAFT_256144-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3324bp|location=Sequence derived from alignment at KZ851907.1:90549..91809+ (Aspergillus niger ATCC 13496)
ATGCCGCTCGAAGCTACCATGATCATTGTCGACAATAGCGAAAGCAGCAG
AAATGGAGATTATACCTCGACACGATGGCAAGCTCAGATCGACGCCGTGA
GCGTCATTCACACCACTAAGATGCGCGTGCACCCTCAGTCTGCTGTCGGT
CTTATGAGCATGGGCGGAAAAGGTCCCGAGGTCCTTTCGACATTTACTTC
CGACTTTGGTGGTATCCTGGCCGGTCTGCATCGCACGAAGATCCATGGCA
CTGCCCACCTTAGCTCCAGCATACAAGTGGCCGGTCTTGCCCTCAAACAC
CGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCCTGCTCTCC
CATCGAAGAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAAGATGAAGA
AGAACAACGTGTCCATCGATGTAATTGCCTTTGGAGATCTGGAATCCGAT
CAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGTGGTGACGG
CTCTAACCTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAGTGAGGAGC
TTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCGATGGTGCA
GGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCGGCTGAGAA
CGACCCCGAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGAGGAGAAGA
ACCGGCAAGAGAAGGAAAAGCGCGACCGGGAGGAGCAAGAGCGCAAAGCC
AACCTGGACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAAGACAAGAA
AGAGGATGGTGACAAGATGGACACTGCTTAAATGCCGCTCGAAGCTACCA
TGATCATTGTCGACAATAGCGAAAGCAGCAGAAATGGAGATTATACCTCG
ACACGATGGCAAGCTCAGATCGACGCCGTGAGCGTCATTCACACCACTAA
GATGCGCGTGCACCCTCAGTCTGCTGTCGGTCTTATGAGCATGGGCGGAA
AAGGTCCCGAGGTCCTTTCGACATTTACTTCCGACTTTGGTGGTATCCTG
GCCGGTCTGCATCGCACGAAGATCCATGGCACTGCCCACCTTAGCTCCAG
CATACAAGTGGCCGGTCTTGCCCTCAAACACCGCTCCGAGAAGTCCCAGA
GACAGCGCATCATCGTGTTCTCCTGCTCTCCCATCGAAGAAGACGAGAAG
ACATTAGTGAAGCTGGCCAAGAAGATGAAGAAGAACAACGTGTCCATCGA
TGTAATTGCCTTTGGAGATCTGGAATCCGATCAGACCAAGAAACTAGAGG
CCTTCGTCGAGAACGTCAAGGGTGGTGACGGCTCTAACCTCGCCATCATT
CCCCCGGGCCCCAACTTGCTGAGTGAGGAGCTTCAGGTTACTCCCATTCT
GGGCGGGGACAGCTCCGGTGCCGATGGTGCAGGTCCTGAAGGCGGCGATG
GTGCCTTTGGGTTCGAGGATGCGGCTGAGAACGACCCCGAACTGGCATTC
GCCCTCCGTCTATCTTTGGAAGAGGAGAAGAACCGGCAAGAGAAGGAAAA
GCGCGACCGGGAGGAGCAAGAGCGCAAAGCCAACCTGGACAACATTCCCG
AGGAGGGCTCCAGTGGGAGCAAAGACAAGAAAGAGGATGGTGACAAGATG
GACACTGCTTAAATGCCGCTCGAAGCTACCATGATCATTGTCGACAATAG
CGAAAGCAGCAGAAATGGAGATTATACCTCGACACGATGGCAAGCTCAGA
TCGACGCCGTGAGCGTCATTCACACCACTAAGATGCGCGTGCACCCTCAG
TCTGCTGTCGGTCTTATGAGCATGGGCGGAAAAGGTCCCGAGGTCCTTTC
GACATTTACTTCCGACTTTGGTGGTATCCTGGCCGGTCTGCATCGCACGA
AGATCCATGGCACTGCCCACCTTAGCTCCAGCATACAAGTGGCCGGTCTT
GCCCTCAAACACCGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGTGTT
CTCCTGCTCTCCCATCGAAGAAGACGAGAAGACATTAGTGAAGCTGGCCA
AGAAGATGAAGAAGAACAACGTGTCCATCGATGTAATTGCCTTTGGAGAT
CTGGAATCCGATCAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAA
GGGTGGTGACGGCTCTAACCTCGCCATCATTCCCCCGGGCCCCAACTTGC
TGAGTGAGGAGCTTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCCGGT
GCCGATGGTGCAGGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGA
TGCGGCTGAGAACGACCCCGAACTGGCATTCGCCCTCCGTCTATCTTTGG
AAGAGGAGAAGAACCGGCAAGAGAAGGAAAAGCGCGACCGGGAGGAGCAA
GAGCGCAAAGCCAACCTGGACAACATTCCCGAGGAGGGCTCCAGTGGGAG
CAAAGACAAGAAAGAGGATGGTGACAAGATGGACACTGCTTAAATGCCGC
TCGAAGCTACCATGATCATTGTCGACAATAGCGAAAGCAGCAGAAATGGA
GATTATACCTCGACACGATGGCAAGCTCAGATCGACGCCGTGAGCGTCAT
TCACACCACTAAGATGCGCGTGCACCCTCAGTCTGCTGTCGGTCTTATGA
GCATGGGCGGAAAAGGTCCCGAGGTCCTTTCGACATTTACTTCCGACTTT
GGTGGTATCCTGGCCGGTCTGCATCGCACGAAGATCCATGGCACTGCCCA
CCTTAGCTCCAGCATACAAGTGGCCGGTCTTGCCCTCAAACACCGCTCCG
AGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCCTGCTCTCCCATCGAA
GAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAAGATGAAGAAGAACAA
CGTGTCCATCGATGTAATTGCCTTTGGAGATCTGGAATCCGATCAGACCA
AGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGTGGTGACGGCTCTAAC
CTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAGTGAGGAGCTTCAGGT
TACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCGATGGTGCAGGTCCTG
AAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCGGCTGAGAACGACCCC
GAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGAGGAGAAGAACCGGCA
AGAGAAGGAAAAGCGCGACCGGGAGGAGCAAGAGCGCAAAGCCAACCTGG
ACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAAGACAAGAAAGAGGAT
GGTGACAAGATGGACACTGCTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_256144M747DRAFT_256144Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256144-T1M747DRAFT_256144-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256144-T1.utr5p1M747DRAFT_256144-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256144-T1.exon1M747DRAFT_256144-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_256144-T1.exon2M747DRAFT_256144-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_256144-T1.exon3M747DRAFT_256144-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_256144-T1.exon4M747DRAFT_256144-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256144-T1.cdsM747DRAFT_256144-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256144-T1.utr3p1M747DRAFT_256144-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264XF3
DBxrefInterPro:IPR003903
DBxrefInterPro:IPR002035
DBxrefInterPro:IPR036465
DBxrefPFAM:PF13519
DBxrefPFAM:PF04056
Product26S proteasome regulatory subunit S5A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:90549..91809 +
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