You are here

Home

M747DRAFT_256364-T1, M747DRAFT_256364-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_256364-T1
Unique NameM747DRAFT_256364-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851907.1:488269..489526-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_256364-T1 ID=M747DRAFT_256364-T1|Name=M747DRAFT_256364-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1258bp|location=Sequence derived from alignment at KZ851907.1:488269..489526- (Aspergillus niger ATCC 13496)
ATTTCTATTATCAGGGACTAATAATACTGCAGGTTCTCCTGGAATTGCTT
TTCTTTAGAACTGTCACTCACTGAATATTTTCCTTACGGCCATCTGACGT
GCAAGCGTGCATTTAGGAAAGGTTACACAACGGTTCTTTCTCTTTAGAGC
GGCTCTAAACCCTCCTAGTCTCCGATAGTAACAAACAATCTATACTCACC
CCTATCTATCTACACACCCTCTCTAACAGCACACAACACCCCGAACATCA
ACATGGCCACTACCACCGAAGACCCCATCAAACTCACCTACCAAGGCCGT
CTGGCAATCATCACCCTCAACCGGCCCAAGAAACTCAATGCCCTAGACGG
AGACCTCTACTACCTCCTCGGCGAACGTCTCCGCGAAGTAGACAAGCGAG
ATGACATCTTCATCACCATCCTCACAGGCTCAGGACGCTACTTCTCCGCG
TAAGTTTTCCCTTTCTCCCACACATAACCACAAATACCAAATACATCCTA
ATCCTCCATCTCCAGCGGCGCGGACGTAAACTCCTCCCGCCCCGGCGGCG
GCCTCGGCACCTCCGCACGGCGCGACCTCGCCCGGTCTTTCGTAATAAAC
AACTACGACATCACACACACCTTCGCGCACCACTCGAAGATCCTAATCGC
CGCGCTCAATGGCCCCGCTGTCGGGCTCTCCGCGGCCCTCATCGCCCTCG
CGGACTTCATCTACGCCGCGCCGCACACCTTCCTTCTCACGCCGTTCGCC
TCGCTGGGCCTCGTAGCGGAGGGCGGGTCGTCGCGGGCGTTCGTGGAGCG
TCTGGGCATCGCGAAAGCCAACGAGGCGCTTATCATGAGTAAGAGGATTA
CGTGCGAGGAGTTGGTGGCGGCTGGGTTCGTGAATAAGGTGTTTACGGCG
CCGAGTGGGAAGAGCGATGATAGTGAGGGGTTCTTGGGGCTGGTGTTGCA
GGAGGTGGAGGAGAGGTTGGGGTTGCATTTGAATCAGGAGAGTTTGCTCA
AGATTAAGGAGTTGATTAGACGGCCCGAGAGGGAGGTGCTGGATCGCCAG
AACGGGTTGGAGGTTTTCGGGGGGCTCGAGAGGTTTCTTAGTGGGGTGCC
GCAGGAGGAGTTTAGGAGGTTGGCGAGTGGGGAGAAGAAGCACAAGTTGT
GAGACATTGGGTTGGGTTGAAGGGTATATAGTGAGTGTTCGTAGTACATA
TGGGCTAGATGGTTTGTGGAGTATAGAAGGTAGAGAGGTGGAGGAGGTTA
ATGCGAGT
back to top

Coding sequence (CDS) from alignment at KZ851907.1:488269..489526-

>M747DRAFT_256364-T1 ID=M747DRAFT_256364-T1|Name=M747DRAFT_256364-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1668bp|location=Sequence derived from alignment at KZ851907.1:488269..489526- (Aspergillus niger ATCC 13496)
CGGCGCGGACGTAAACTCCTCCCGCCCCGGCGGCGGCCTCGGCACCTCCG
CACGGCGCGACCTCGCCCGGTCTTTCGTAATAAACAACTACGACATCACA
CACACCTTCGCGCACCACTCGAAGATCCTAATCGCCGCGCTCAATGGCCC
CGCTGTCGGGCTCTCCGCGGCCCTCATCGCCCTCGCGGACTTCATCTACG
CCGCGCCGCACACCTTCCTTCTCACGCCGTTCGCCTCGCTGGGCCTCGTA
GCGGAGGGCGGGTCGTCGCGGGCGTTCGTGGAGCGTCTGGGCATCGCGAA
AGCCAACGAGGCGCTTATCATGAGTAAGAGGATTACGTGCGAGGAGTTGG
TGGCGGCTGGGTTCGTGAATAAGGTGTTTACGGCGCCGAGTGGGAAGAGC
GATGATAGTGAGGGGTTCTTGGGGCTGGTGTTGCAGGAGGTGGAGGAGAG
GTTGGGGTTGCATTTGAATCAGGAGAGTTTGCTCAAGATTAAGGAGTTGA
TTAGACGGCCCGAGAGGGAGGTGCTGGATCGCCAGAACGGGTTGGAGGTT
TTCGGGGGGCTCGAGAGGTTTCTTAGTGGGGTGCCGCAGGAGGAGTTTAG
GAGGTTGGCGAGTGGGGAGAAGAAGCACAAGTTGTGAATGGCCACTACCA
CCGAAGACCCCATCAAACTCACCTACCAAGGCCGTCTGGCAATCATCACC
CTCAACCGGCCCAAGAAACTCAATGCCCTAGACGGAGACCTCTACTACCT
CCTCGGCGAACGTCTCCGCGAAGTAGACAAGCGAGATGACATCTTCATCA
CCATCCTCACAGGCTCAGGACGCTACTTCTCCGCCGGCGCGGACGTAAAC
TCCTCCCGCCCCGGCGGCGGCCTCGGCACCTCCGCACGGCGCGACCTCGC
CCGGTCTTTCGTAATAAACAACTACGACATCACACACACCTTCGCGCACC
ACTCGAAGATCCTAATCGCCGCGCTCAATGGCCCCGCTGTCGGGCTCTCC
GCGGCCCTCATCGCCCTCGCGGACTTCATCTACGCCGCGCCGCACACCTT
CCTTCTCACGCCGTTCGCCTCGCTGGGCCTCGTAGCGGAGGGCGGGTCGT
CGCGGGCGTTCGTGGAGCGTCTGGGCATCGCGAAAGCCAACGAGGCGCTT
ATCATGAGTAAGAGGATTACGTGCGAGGAGTTGGTGGCGGCTGGGTTCGT
GAATAAGGTGTTTACGGCGCCGAGTGGGAAGAGCGATGATAGTGAGGGGT
TCTTGGGGCTGGTGTTGCAGGAGGTGGAGGAGAGGTTGGGGTTGCATTTG
AATCAGGAGAGTTTGCTCAAGATTAAGGAGTTGATTAGACGGCCCGAGAG
GGAGGTGCTGGATCGCCAGAACGGGTTGGAGGTTTTCGGGGGGCTCGAGA
GGTTTCTTAGTGGGGTGCCGCAGGAGGAGTTTAGGAGGTTGGCGAGTGGG
GAGAAGAAGCACAAGTTGTGAATGGCCACTACCACCGAAGACCCCATCAA
ACTCACCTACCAAGGCCGTCTGGCAATCATCACCCTCAACCGGCCCAAGA
AACTCAATGCCCTAGACGGAGACCTCTACTACCTCCTCGGCGAACGTCTC
CGCGAAGTAGACAAGCGAGATGACATCTTCATCACCATCCTCACAGGCTC
AGGACGCTACTTCTCCGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_256364M747DRAFT_256364Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256364-T1M747DRAFT_256364-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256364-T1.cdsM747DRAFT_256364-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256364-T1.utr3p1M747DRAFT_256364-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256364-T1.exon2M747DRAFT_256364-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_256364-T1.exon1M747DRAFT_256364-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256364-T1.utr5p1M747DRAFT_256364-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029045
DBxrefInterPro:IPR001753
DBxrefPFAM:PF16113
DBxrefPFAM:PF00378
ProductClpP/crotonase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851907.1supercontigKZ851907.1:488269..489526 -
Powered by Drupal