You are here

Home

M747DRAFT_256668-T1, M747DRAFT_256668-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_256668-T1
Unique NameM747DRAFT_256668-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:191449..192923+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_256668-T1 ID=M747DRAFT_256668-T1|Name=M747DRAFT_256668-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1475bp|location=Sequence derived from alignment at KZ851908.1:191449..192923+ (Aspergillus niger ATCC 13496)
GTAGCCTTCGAATTTTAATCAACTGCATCGCTTTGACACGTCTGAAGATG
CATGAGCACACACGAAAGCACAAGGTGGCCGTGGTCGGCTCCGGTAATTG
GTATGCACCAACCCTTTCTTGCCGCTGCCGCGCATTTGGCTAATACCGTT
GTAATCTAGGGGATCCACCATCTCCAAGATTGTTGCGGAGAACGCCAGAG
AGCATTCGGACCTTTTCGAGCCAGAAGTGCGCATGTGGGTGTTCGAGGAG
GAAATCGAAATCCCTGAATCCTCCAAGCACCACTCCAAACTAGGCGGCCA
GAAGCACAAATTGACCGAGGTCATCAACGGAGTCCACGAGAATGTCAAAT
ACCTGCCGGATATTGCACTCCCTGAAAACGTCGTAGCCGACCCAGATCTC
AAATCGGCTGTTAAAGATGCTACATTACTCGTCTTCAACCTCCCCCATCA
GTTTATCGGCAAGACCCTCGATGGTGTTGTCGGGCACCATCTACCCTATG
CGCGAGGTATCTCTTGCATCAAGGGCGTCGATGTGTCTGACGGAACCGTG
ACCCTTCACTCGGAACTTATCATGGAGCGACTGGGCATCTACTGCGGCGC
CTTGTCCGGCGCCAACATCGCCCCAGAGGTGGCCGCGGAGAAGTTTTGTG
AGACGACCATTGGTTACGACACCCCTCCAATGGATGTGGAGGAGCGTGAT
GGGTCGCCGAAGGAAAACTTAATCAAGATTGATGAGCAGCGGCAACATAA
GACTAAACCCACGCATGTCAAATTACACCCAGTGCCAAAAGATCTCCCCC
CTGTCGACGCTGAGCTGTGGGAGACTCTGTTTGCCCGCCCATATTTCCAT
GTTAATCACGTTCGCGATGTTGCCGGGGTGGCTCTAGGGGGTGCACTCAA
AAACATTGTAGCTTTAGCATCGGGGTTTGTTGCAGGAAAGGGCTGGGGAG
AAAATGCCAAGGCTGCAATTATGCGTGTCGGCATCTTGGAGATGATCAAG
TTTGGTCGGACGTGGTTTCCCAAGTCTGTGGATGAGAGAACCTTTACCGA
GGAGAGCGCGGGTCTAGCGGACGTGATCTCCTCGTGTAGCGGTGGGCGGA
ACTTCCGGTCAGCTTGTCACGCAGTCGAGCAGGGGGTCAGCGTCAATGAA
ATCGAACAGAAGGAGCTCAACGGTCAGAAACTGCAGGGGACTTCGACGGC
CTACGCTGTTTATGACTTTCTCTCGAAGCACGACCAGTTGAAGGAATTTC
CGTTGTTTGTTGCTGTTCATGGTAAGCATTCTCTTCGGTTTTCTGTTCCT
CGCAATCTCTCACTAACTTTTTGTCAGATATCCTCGAAGGGAAGTCTACT
GTTGATGACCTCCCAGCACTGCTAGATGGGAAAAAGAAGAAGAATAAGAG
CGCCTGAGCGTGCGTGATCACATTCAATGGTGCTGGGGAAGTAGATAATG
AGATATGACACGTAGCTAGAATGTG
back to top

Coding sequence (CDS) from alignment at KZ851908.1:191449..192923+

>M747DRAFT_256668-T1 ID=M747DRAFT_256668-T1|Name=M747DRAFT_256668-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3735bp|location=Sequence derived from alignment at KZ851908.1:191449..192923+ (Aspergillus niger ATCC 13496)
ATGCATGAGCACACACGAAAGCACAAGGTGGCCGTGGTCGGCTCCGGTAA
TTGGGGATCCACCATCTCCAAGATTGTTGCGGAGAACGCCAGAGAGCATT
CGGACCTTTTCGAGCCAGAAGTGCGCATGTGGGTGTTCGAGGAGGAAATC
GAAATCCCTGAATCCTCCAAGCACCACTCCAAACTAGGCGGCCAGAAGCA
CAAATTGACCGAGGTCATCAACGGAGTCCACGAGAATGTCAAATACCTGC
CGGATATTGCACTCCCTGAAAACGTCGTAGCCGACCCAGATCTCAAATCG
GCTGTTAAAGATGCTACATTACTCGTCTTCAACCTCCCCCATCAGTTTAT
CGGCAAGACCCTCGATGGTGTTGTCGGGCACCATCTACCCTATGCGCGAG
GTATCTCTTGCATCAAGGGCGTCGATGTGTCTGACGGAACCGTGACCCTT
CACTCGGAACTTATCATGGAGCGACTGGGCATCTACTGCGGCGCCTTGTC
CGGCGCCAACATCGCCCCAGAGGTGGCCGCGGAGAAGTTTTGTGAGACGA
CCATTGGTTACGACACCCCTCCAATGGATGTGGAGGAGCGTGATGGGTCG
CCGAAGGAAAACTTAATCAAGATTGATGAGCAGCGGCAACATAAGACTAA
ACCCACGCATGTCAAATTACACCCAGTGCCAAAAGATCTCCCCCCTGTCG
ACGCTGAGCTGTGGGAGACTCTGTTTGCCCGCCCATATTTCCATGTTAAT
CACGTTCGCGATGTTGCCGGGGTGGCTCTAGGGGGTGCACTCAAAAACAT
TGTAGCTTTAGCATCGGGGTTTGTTGCAGGAAAGGGCTGGGGAGAAAATG
CCAAGGCTGCAATTATGCGTGTCGGCATCTTGGAGATGATCAAGTTTGGT
CGGACGTGGTTTCCCAAGTCTGTGGATGAGAGAACCTTTACCGAGGAGAG
CGCGGGTCTAGCGGACGTGATCTCCTCGTGTAGCGGTGGGCGGAACTTCC
GGTCAGCTTGTCACGCAGTCGAGCAGGGGGTCAGCGTCAATGAAATCGAA
CAGAAGGAGCTCAACGGTCAGAAACTGCAGGGGACTTCGACGGCCTACGC
TGTTTATGACTTTCTCTCGAAGCACGACCAGTTGAAGGAATTTCCGTTGT
TTGTTGCTGTTCATGATATCCTCGAAGGGAAGTCTACTGTTGATGACCTC
CCAGCACTGCTAGATGGGAAAAAGAAGAAGAATAAGAGCGCCTGAATGCA
TGAGCACACACGAAAGCACAAGGTGGCCGTGGTCGGCTCCGGTAATTGGG
GATCCACCATCTCCAAGATTGTTGCGGAGAACGCCAGAGAGCATTCGGAC
CTTTTCGAGCCAGAAGTGCGCATGTGGGTGTTCGAGGAGGAAATCGAAAT
CCCTGAATCCTCCAAGCACCACTCCAAACTAGGCGGCCAGAAGCACAAAT
TGACCGAGGTCATCAACGGAGTCCACGAGAATGTCAAATACCTGCCGGAT
ATTGCACTCCCTGAAAACGTCGTAGCCGACCCAGATCTCAAATCGGCTGT
TAAAGATGCTACATTACTCGTCTTCAACCTCCCCCATCAGTTTATCGGCA
AGACCCTCGATGGTGTTGTCGGGCACCATCTACCCTATGCGCGAGGTATC
TCTTGCATCAAGGGCGTCGATGTGTCTGACGGAACCGTGACCCTTCACTC
GGAACTTATCATGGAGCGACTGGGCATCTACTGCGGCGCCTTGTCCGGCG
CCAACATCGCCCCAGAGGTGGCCGCGGAGAAGTTTTGTGAGACGACCATT
GGTTACGACACCCCTCCAATGGATGTGGAGGAGCGTGATGGGTCGCCGAA
GGAAAACTTAATCAAGATTGATGAGCAGCGGCAACATAAGACTAAACCCA
CGCATGTCAAATTACACCCAGTGCCAAAAGATCTCCCCCCTGTCGACGCT
GAGCTGTGGGAGACTCTGTTTGCCCGCCCATATTTCCATGTTAATCACGT
TCGCGATGTTGCCGGGGTGGCTCTAGGGGGTGCACTCAAAAACATTGTAG
CTTTAGCATCGGGGTTTGTTGCAGGAAAGGGCTGGGGAGAAAATGCCAAG
GCTGCAATTATGCGTGTCGGCATCTTGGAGATGATCAAGTTTGGTCGGAC
GTGGTTTCCCAAGTCTGTGGATGAGAGAACCTTTACCGAGGAGAGCGCGG
GTCTAGCGGACGTGATCTCCTCGTGTAGCGGTGGGCGGAACTTCCGGTCA
GCTTGTCACGCAGTCGAGCAGGGGGTCAGCGTCAATGAAATCGAACAGAA
GGAGCTCAACGGTCAGAAACTGCAGGGGACTTCGACGGCCTACGCTGTTT
ATGACTTTCTCTCGAAGCACGACCAGTTGAAGGAATTTCCGTTGTTTGTT
GCTGTTCATGATATCCTCGAAGGGAAGTCTACTGTTGATGACCTCCCAGC
ACTGCTAGATGGGAAAAAGAAGAAGAATAAGAGCGCCTGAATGCATGAGC
ACACACGAAAGCACAAGGTGGCCGTGGTCGGCTCCGGTAATTGGGGATCC
ACCATCTCCAAGATTGTTGCGGAGAACGCCAGAGAGCATTCGGACCTTTT
CGAGCCAGAAGTGCGCATGTGGGTGTTCGAGGAGGAAATCGAAATCCCTG
AATCCTCCAAGCACCACTCCAAACTAGGCGGCCAGAAGCACAAATTGACC
GAGGTCATCAACGGAGTCCACGAGAATGTCAAATACCTGCCGGATATTGC
ACTCCCTGAAAACGTCGTAGCCGACCCAGATCTCAAATCGGCTGTTAAAG
ATGCTACATTACTCGTCTTCAACCTCCCCCATCAGTTTATCGGCAAGACC
CTCGATGGTGTTGTCGGGCACCATCTACCCTATGCGCGAGGTATCTCTTG
CATCAAGGGCGTCGATGTGTCTGACGGAACCGTGACCCTTCACTCGGAAC
TTATCATGGAGCGACTGGGCATCTACTGCGGCGCCTTGTCCGGCGCCAAC
ATCGCCCCAGAGGTGGCCGCGGAGAAGTTTTGTGAGACGACCATTGGTTA
CGACACCCCTCCAATGGATGTGGAGGAGCGTGATGGGTCGCCGAAGGAAA
ACTTAATCAAGATTGATGAGCAGCGGCAACATAAGACTAAACCCACGCAT
GTCAAATTACACCCAGTGCCAAAAGATCTCCCCCCTGTCGACGCTGAGCT
GTGGGAGACTCTGTTTGCCCGCCCATATTTCCATGTTAATCACGTTCGCG
ATGTTGCCGGGGTGGCTCTAGGGGGTGCACTCAAAAACATTGTAGCTTTA
GCATCGGGGTTTGTTGCAGGAAAGGGCTGGGGAGAAAATGCCAAGGCTGC
AATTATGCGTGTCGGCATCTTGGAGATGATCAAGTTTGGTCGGACGTGGT
TTCCCAAGTCTGTGGATGAGAGAACCTTTACCGAGGAGAGCGCGGGTCTA
GCGGACGTGATCTCCTCGTGTAGCGGTGGGCGGAACTTCCGGTCAGCTTG
TCACGCAGTCGAGCAGGGGGTCAGCGTCAATGAAATCGAACAGAAGGAGC
TCAACGGTCAGAAACTGCAGGGGACTTCGACGGCCTACGCTGTTTATGAC
TTTCTCTCGAAGCACGACCAGTTGAAGGAATTTCCGTTGTTTGTTGCTGT
TCATGATATCCTCGAAGGGAAGTCTACTGTTGATGACCTCCCAGCACTGC
TAGATGGGAAAAAGAAGAAGAATAAGAGCGCCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0009331glycerol-3-phosphate dehydrogenase complex
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0046168glycerol-3-phosphate catabolic process
GO:0006072glycerol-3-phosphate metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0016491oxidoreductase activity
GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_256668M747DRAFT_256668Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256668-T1M747DRAFT_256668-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256668-T1.utr5p1M747DRAFT_256668-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256668-T1.exon1M747DRAFT_256668-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_256668-T1.exon2M747DRAFT_256668-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_256668-T1.exon3M747DRAFT_256668-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256668-T1.cdsM747DRAFT_256668-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_256668-T1.utr3p1M747DRAFT_256668-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR006109
DBxrefInterPro:IPR011128
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006168
DBxrefPFAM:PF01210
DBxrefPFAM:PF07479
Productglycerol-3-phosphate dehydrogenase [NAD ]
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:191449..192923 +
Powered by Drupal