You are here

Home

M747DRAFT_259038-T1, M747DRAFT_259038-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_259038-T1
Unique NameM747DRAFT_259038-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:165639..167858+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_259038-T1 ID=M747DRAFT_259038-T1|Name=M747DRAFT_259038-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2220bp|location=Sequence derived from alignment at KZ851913.1:165639..167858+ (Aspergillus niger ATCC 13496)
GAGCCTCACGCTAGACTACCCGTTATTGACAAATACTAGAGCGATGATTC
TGCACGGGCAACATCTCCACTTATGAGGCTGAGTAAACTCAATTTTGCCC
TGAGGAATCTTTACTAATACGACCCAACCGCCCTTCCGCGAAAGAACCCC
AACCTGCGTGGTCCAACATTGTAGCTTAGCGTGTCGTCAGCAATATGGCC
ATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCTGCGCAA
GTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGTTACGCA
AGAAGGTACTACACGAAGCATATGCTGTGCTTCCATCCTATACGCTTCAG
ACCAATCATTCTGATTATATCGCCAGTGCGATGAAGCCAGACCGAAATGC
TCACGTTGCACCAGACTCTCGTACACATGTCAATATCAACACCGTCCGAA
TACCAGCGAATCGGACACAGAGCCGACGGGTTTCCCGAACTCGGAGATTG
AATTCGCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGATCGTCCA
TCGGGTCCTATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCCACAATC
AAATGGCGAGGAAGATATACCCGGCTTAGACCTACCCTCCCCGGATCCTC
TCAACGCGACCGAACTCAATCTCCTAGCTCATTACCTCTCGCACACTAGC
CAAACGATCCCATTCGATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGT
ACCTAATCTTGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCC
TGGCAGCAGCATGCAAATGCCACGACATAGCAAATGAGAACACCCAAAGA
CCCCTCGACACACGGACCTTAACAGAGATCAATGACCTCCTTGCGTTAGC
CGAACGCCATCACGCGGCATCTCTCCGCCACATCCAAGCCACGATGCAAA
TAACCGAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATGGTCTTG
TACGCATCGGCCAGCCACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGA
GAAATATGGACAGAGGCTGCCGAAAGAATTATTGCCGCAACATTCGCAGT
GGATTTCGTTCACACGCGCAGCGCATACCGCATCTAGTGCTATACTCCAT
GATATTGTTAACGCTACTCCTTCCAGCAGCACGGTGGTGGATACGGGATC
AGAGTCCCATGGAACAACATCAAGTCCTTCATCACCGCAAGGCGGTCCAT
CTCCGAAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACCTGTAAT
CGAGCTCTTGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCA
GCGTTCCTCTGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTCACGCAT
TACTGGAAACCATAAATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCG
CCAGGGGCAAGTGTTAAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATAC
TCAGCACACCTCGATGTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGG
CTCGATACATGATCAGTGTCACGTCTATGGAGGCACCGCAAATTCTCCGA
CGTATCATTATGTCTTTTTTGAACAAGGCTCCGACCGAGTTTCTCAACAT
TGTGCGATCGGTATTGGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTA
CAACACTACCGGCTTCATCCGCAACCAGGGAGCCATTAATGGTCACTCCG
ATACATATCCTGGCTATGGATATATTCGCTCATTGGCTGGTTTTGGTCAT
GTTATTGGATGGGGTGTGGTGGATCAGTAATATTGGACAGTGGGAGCTCA
GCCAAGTCATCTCTTTGATGAAAACACAGAATGTCCTCTCCCAGTTGGCT
GACAGTAGCGAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGA
GCTCACGCCCGATTCCTGGCATTAATAAGCGCGTGATTGTTATATCATAA
AGTGGTCTGGACATAGTTCTAAGCATCGTACAACATTATAACTAACCGGC
CATCGAATATTTGGTAACAGCTGTCATGAATACCTGACACAGCTCACGCA
ATGCAGTACAGGAATCTGAACAGTCAGCTCAAGACAAGCATATCATGATT
CCTACTCCCAGTCCACAAATCGAACCCTAGTTAGCCACGCGCCATCTGGT
CCGTTAGGCTTCGAAAGCAG
back to top

Coding sequence (CDS) from alignment at KZ851913.1:165639..167858+

>M747DRAFT_259038-T1 ID=M747DRAFT_259038-T1|Name=M747DRAFT_259038-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3420bp|location=Sequence derived from alignment at KZ851913.1:165639..167858+ (Aspergillus niger ATCC 13496)
ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGT
TACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGA
CTCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGA
CACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCG
AACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACT
CCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGAGGAAGA
TATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAACGCGACCGAAC
TCAATCTCCTAGCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTC
GATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTT
CAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCA
AATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGG
ACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGC
GGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAATCCTACG
ATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGC
CACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAATATGGACAGAG
GCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGTTCACAC
GCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTTAACGCT
ACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCATGGAAC
AACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAACGAAGA
GCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTTGGAAAT
CTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCTGCTTT
ATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAACCATAA
ATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGTT
AAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACACCTCGAT
GTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCA
GTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTATCATTATGTCT
TTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGCGATCGGTATT
GGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACACTACCGGCTT
CATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCT
ATGGATATATTCGCTCATTGGCTGGTTTTGGTCATGTTATTGGATGGGGT
GTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTT
TGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATG
TGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTC
CTGGCATTAAATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCG
GATATAGGCTGCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGA
TGCAAGCAGTTACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACG
TTGCACCAGACTCTCGTACACATGTCAATATCAACACCGTCCGAATACCA
GCGAATCGGACACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTC
GCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGG
TCCTATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATG
GCGAGGAAGATATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAAC
GCGACCGAACTCAATCTCCTAGCTCATTACCTCTCGCACACTAGCCAAAC
GATCCCATTCGATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTA
ATCTTGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCA
GCAGCATGCAAATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCT
CGACACACGGACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAAC
GCCATCACGCGGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACC
GAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGC
ATCGGCCAGCCACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAAT
ATGGACAGAGGCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATT
TCGTTCACACGCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATAT
TGTTAACGCTACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGT
CCCATGGAACAACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCG
AAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGC
TCTTGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTT
CCTCTGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTG
GAAACCATAAATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGG
GGCAAGTGTTAAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGC
ACACCTCGATGTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGA
TACATGATCAGTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTAT
CATTATGTCTTTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGC
GATCGGTATTGGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACA
CTACCGGCTTCATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACA
TATCCTGGCTATGGATATATTCGCTCATTGGCTGGTTTTGGTCATGTTAT
TGGATGGGGTGTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAA
GTCATCTCTTTGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAG
TAGCGAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCA
CGCCCGATTCCTGGCATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_259038M747DRAFT_259038Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259038-T1.utr5p1M747DRAFT_259038-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259038-T1.exon1M747DRAFT_259038-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_259038-T1.exon2M747DRAFT_259038-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259038-T1.cdsM747DRAFT_259038-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259038-T1.utr3p1M747DRAFT_259038-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259038-T1M747DRAFT_259038-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:165639..167858 +
Powered by Drupal