You are here

Home

M747DRAFT_259056-T1, M747DRAFT_259056-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_259056-T1
Unique NameM747DRAFT_259056-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851913.1:195444..197759+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_259056-T1 ID=M747DRAFT_259056-T1|Name=M747DRAFT_259056-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2316bp|location=Sequence derived from alignment at KZ851913.1:195444..197759+ (Aspergillus niger ATCC 13496)
ATGGCTGAACTCACAACCCGCAACGGCGATCCTTTCGACCGTACACTTTT
TGAGTCACTTTTGAAGCGTCGACTTTTCTATACCGAATCTTTCGAAATTT
ACCGAACCTCTGGAAATCTCACAGGCGATAGCAGGGGCCTCTACGATTAT
GGACCTCCAGGGTGTGCGCTTCAGTCAAACATTGTGGACTTATGGCGGAA
ACACTTCGTCCTTCAGGAAGATATGCTCGAACTGGATTGCACAATTCTAA
CACCTGAGGAAGTATTCAAGACCAGTGGTCATGTTGATAAATTCGAGGAC
TGGATGTGCAAGGATTTCAAGAAGGGAGATTTCTTACGGGCCGACCACCT
TATTGGAACGGTTCTTGAGGCGAGACTGAAGGGTGATAAGGTAGCCAGAG
GCATTGCTGCTGAAGGTGACAAAGCTTATGGTGAAGGGGAAAAGAAGAAG
AAGGGTCCCAGAGTGAGCGACATCAAGGCGATGAAGTTGGAGGATGCTGT
CGTCGCGGAATACGAGGAGGTTCTTGCCAAGGTATGAGCTGATAAGGGTT
TGCCATTCCTTTCTACTACTTATCGTGGGCTTCCTAGATCGATAACTACG
ATGGATCCGAGCTCGGCACGTTGATCAAGAAGTATGACATTCGGAACCCT
GATGGAGACGCACCGGTATCATCACCCGTCCCCTTCAATCTCATGTTCAA
GACAACTGTCGGGCCCAGCAGTGCTTCCCCGGGATATCTCCGACCAGAGA
CAGCCCAAGGCCAGTTCCTAAACTTCAAGAAACTTCTGGACTACAACCAG
AACTCGATGCCATTTGCGTCTGCTTCTATTGGAAAATCATTTCGCAATGA
AATTTCCCCTCGTTCTGGCCTGCTCCGCGTGAGAGAATTCCTTATGGCTG
AGATCGAGCACTTCGTCGATCCAGAAGGTGGAAAGAAGCATGCTAAGTTT
GACCTGGTTAAAGATTTGCAACTCAGCTTCCTCGATCGCGCAACCCAGCT
GGGTGGTAAGACCACTCTGCAGAAGACTACAATCGGAGAAGCAGTGTCCA
GTAAGATGGTAGATAATGAGACGCTGGGATACTTTTTGGGCCGCATCTAC
ATATTTCTGCTGAAGATCGGCGTCGACACGAATAAAGTCCGATTCCGTCA
ACACATGGCAAACGAGATGGCCCATTATGCTACTGACTGCTGGGACGCCG
AGCTCCAGACCACTTACGGCTGGATTGAATGTGTTGGATGTGCGGATCGC
AGCGCCTACGATTTGACCGTCCATTCCAGGAAAACAAAAGAGCCTCTCGT
CGTCCGTGAACCTCGGCGTGAGCCACTGAGAGTAGAAGAGTGGCAAATTG
ACATCAGCAAGCCCAAGCTGGGACCACTCTTCAAGAAAAACGCCAAAGCT
GTGGAAGCGGCGCTGATCGCGCTCTCTCAGTCTGAGCGGGAGTCCCTCGC
TACAATTCTAGAAAAGAAGGGTATCATTACAGTCACTGTCCCCGAGATGG
CAGAACAGGTTGAGATCTCCAAAGACTTGATTAGTATCGTCAAAAGAACG
AGAATTGAAAACATCCGCGAATACATCCCCAATGTTATCGAGCCATCATT
CGGCTTTGGGCGAATTTTCTACAGTCTGCTGGAGCATGTTTACTGGCATC
GTGCTAACGATCCCGCGCGTGGTGTATGTCACTCCTTCCTATAAGCTCAG
CCGGACTACCTTTTTCGTCCTATTTCATCTTGAACTAATGTGTTGCATCA
GGTTCTGTCCCTCCCCATCTCGGTGGCACCCACGAAAGTTCTCATTGTCC
CGCTCTCCACTCACCAAGACTTTGTTCCCATAACAAAGAGAATCACTGAG
GATCTCCGTGAGCTAGGCATATCTTGCCGCGCTGATGAGTCCTCTGCAAG
TATCGGAAAGAGGTATGCCCGGAATGACGAATTGGGTATCCCGCTCGGTA
TCACGATCGACTTCGACTCTGTGAAGGATGGAACGATCACGCTGCGTGAG
CGCGATAGTACAAAGCAAGTCCGCGCCTCTAAAGAGGAAATCCTCGGTGC
TATCGAGTCTCTCATTAGCGGTAAGATGAATTGGGAGGATGTGTTTGCGA
GACTCCCTGAGTTCCTGGGCCAGAGCGGAGATGATTAAAACTACTCGTTA
TTATCTCAATGACGCACAGAATGCTTGGAAGTCTCTCTCATCGCCATTAA
GGGACTTATACATGGGCCTGACGGGTTTTCTTCAAGTTTATTGCTTTTTA
TGCTCTTTCTTGGATCCACATAACCCAGCAGAAAACCTCACGCTTGCCTC
TCTACTCATCGGCTGT
back to top

Coding sequence (CDS) from alignment at KZ851913.1:195444..197759+

>M747DRAFT_259056-T1 ID=M747DRAFT_259056-T1|Name=M747DRAFT_259056-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6012bp|location=Sequence derived from alignment at KZ851913.1:195444..197759+ (Aspergillus niger ATCC 13496)
ATGGCTGAACTCACAACCCGCAACGGCGATCCTTTCGACCGTACACTTTT
TGAGTCACTTTTGAAGCGTCGACTTTTCTATACCGAATCTTTCGAAATTT
ACCGAACCTCTGGAAATCTCACAGGCGATAGCAGGGGCCTCTACGATTAT
GGACCTCCAGGGTGTGCGCTTCAGTCAAACATTGTGGACTTATGGCGGAA
ACACTTCGTCCTTCAGGAAGATATGCTCGAACTGGATTGCACAATTCTAA
CACCTGAGGAAGTATTCAAGACCAGTGGTCATGTTGATAAATTCGAGGAC
TGGATGTGCAAGGATTTCAAGAAGGGAGATTTCTTACGGGCCGACCACCT
TATTGGAACGGTTCTTGAGGCGAGACTGAAGGGTGATAAGGTAGCCAGAG
GCATTGCTGCTGAAGGTGACAAAGCTTATGGTGAAGGGGAAAAGAAGAAG
AAGGGTCCCAGAGTGAGCGACATCAAGGCGATGAAGTTGGAGGATGCTGT
CGTCGCGGAATACGAGGAGGTTCTTGCCAAGATCGATAACTACGATGGAT
CCGAGCTCGGCACGTTGATCAAGAAGTATGACATTCGGAACCCTGATGGA
GACGCACCGGTATCATCACCCGTCCCCTTCAATCTCATGTTCAAGACAAC
TGTCGGGCCCAGCAGTGCTTCCCCGGGATATCTCCGACCAGAGACAGCCC
AAGGCCAGTTCCTAAACTTCAAGAAACTTCTGGACTACAACCAGAACTCG
ATGCCATTTGCGTCTGCTTCTATTGGAAAATCATTTCGCAATGAAATTTC
CCCTCGTTCTGGCCTGCTCCGCGTGAGAGAATTCCTTATGGCTGAGATCG
AGCACTTCGTCGATCCAGAAGGTGGAAAGAAGCATGCTAAGTTTGACCTG
GTTAAAGATTTGCAACTCAGCTTCCTCGATCGCGCAACCCAGCTGGGTGG
TAAGACCACTCTGCAGAAGACTACAATCGGAGAAGCAGTGTCCAGTAAGA
TGGTAGATAATGAGACGCTGGGATACTTTTTGGGCCGCATCTACATATTT
CTGCTGAAGATCGGCGTCGACACGAATAAAGTCCGATTCCGTCAACACAT
GGCAAACGAGATGGCCCATTATGCTACTGACTGCTGGGACGCCGAGCTCC
AGACCACTTACGGCTGGATTGAATGTGTTGGATGTGCGGATCGCAGCGCC
TACGATTTGACCGTCCATTCCAGGAAAACAAAAGAGCCTCTCGTCGTCCG
TGAACCTCGGCGTGAGCCACTGAGAGTAGAAGAGTGGCAAATTGACATCA
GCAAGCCCAAGCTGGGACCACTCTTCAAGAAAAACGCCAAAGCTGTGGAA
GCGGCGCTGATCGCGCTCTCTCAGTCTGAGCGGGAGTCCCTCGCTACAAT
TCTAGAAAAGAAGGGTATCATTACAGTCACTGTCCCCGAGATGGCAGAAC
AGGTTGAGATCTCCAAAGACTTGATTAGTATCGTCAAAAGAACGAGAATT
GAAAACATCCGCGAATACATCCCCAATGTTATCGAGCCATCATTCGGCTT
TGGGCGAATTTTCTACAGTCTGCTGGAGCATGTTTACTGGCATCGTGCTA
ACGATCCCGCGCGTGGTGTTCTGTCCCTCCCCATCTCGGTGGCACCCACG
AAAGTTCTCATTGTCCCGCTCTCCACTCACCAAGACTTTGTTCCCATAAC
AAAGAGAATCACTGAGGATCTCCGTGAGCTAGGCATATCTTGCCGCGCTG
ATGAGTCCTCTGCAAGTATCGGAAAGAGGTATGCCCGGAATGACGAATTG
GGTATCCCGCTCGGTATCACGATCGACTTCGACTCTGTGAAGGATGGAAC
GATCACGCTGCGTGAGCGCGATAGTACAAAGCAAGTCCGCGCCTCTAAAG
AGGAAATCCTCGGTGCTATCGAGTCTCTCATTAGCGGTAAGATGAATTGG
GAGGATGTGTTTGCGAGACTCCCTGAGTTCCTGGGCCAGAGCGGAGATGA
TTAAATGGCTGAACTCACAACCCGCAACGGCGATCCTTTCGACCGTACAC
TTTTTGAGTCACTTTTGAAGCGTCGACTTTTCTATACCGAATCTTTCGAA
ATTTACCGAACCTCTGGAAATCTCACAGGCGATAGCAGGGGCCTCTACGA
TTATGGACCTCCAGGGTGTGCGCTTCAGTCAAACATTGTGGACTTATGGC
GGAAACACTTCGTCCTTCAGGAAGATATGCTCGAACTGGATTGCACAATT
CTAACACCTGAGGAAGTATTCAAGACCAGTGGTCATGTTGATAAATTCGA
GGACTGGATGTGCAAGGATTTCAAGAAGGGAGATTTCTTACGGGCCGACC
ACCTTATTGGAACGGTTCTTGAGGCGAGACTGAAGGGTGATAAGGTAGCC
AGAGGCATTGCTGCTGAAGGTGACAAAGCTTATGGTGAAGGGGAAAAGAA
GAAGAAGGGTCCCAGAGTGAGCGACATCAAGGCGATGAAGTTGGAGGATG
CTGTCGTCGCGGAATACGAGGAGGTTCTTGCCAAGATCGATAACTACGAT
GGATCCGAGCTCGGCACGTTGATCAAGAAGTATGACATTCGGAACCCTGA
TGGAGACGCACCGGTATCATCACCCGTCCCCTTCAATCTCATGTTCAAGA
CAACTGTCGGGCCCAGCAGTGCTTCCCCGGGATATCTCCGACCAGAGACA
GCCCAAGGCCAGTTCCTAAACTTCAAGAAACTTCTGGACTACAACCAGAA
CTCGATGCCATTTGCGTCTGCTTCTATTGGAAAATCATTTCGCAATGAAA
TTTCCCCTCGTTCTGGCCTGCTCCGCGTGAGAGAATTCCTTATGGCTGAG
ATCGAGCACTTCGTCGATCCAGAAGGTGGAAAGAAGCATGCTAAGTTTGA
CCTGGTTAAAGATTTGCAACTCAGCTTCCTCGATCGCGCAACCCAGCTGG
GTGGTAAGACCACTCTGCAGAAGACTACAATCGGAGAAGCAGTGTCCAGT
AAGATGGTAGATAATGAGACGCTGGGATACTTTTTGGGCCGCATCTACAT
ATTTCTGCTGAAGATCGGCGTCGACACGAATAAAGTCCGATTCCGTCAAC
ACATGGCAAACGAGATGGCCCATTATGCTACTGACTGCTGGGACGCCGAG
CTCCAGACCACTTACGGCTGGATTGAATGTGTTGGATGTGCGGATCGCAG
CGCCTACGATTTGACCGTCCATTCCAGGAAAACAAAAGAGCCTCTCGTCG
TCCGTGAACCTCGGCGTGAGCCACTGAGAGTAGAAGAGTGGCAAATTGAC
ATCAGCAAGCCCAAGCTGGGACCACTCTTCAAGAAAAACGCCAAAGCTGT
GGAAGCGGCGCTGATCGCGCTCTCTCAGTCTGAGCGGGAGTCCCTCGCTA
CAATTCTAGAAAAGAAGGGTATCATTACAGTCACTGTCCCCGAGATGGCA
GAACAGGTTGAGATCTCCAAAGACTTGATTAGTATCGTCAAAAGAACGAG
AATTGAAAACATCCGCGAATACATCCCCAATGTTATCGAGCCATCATTCG
GCTTTGGGCGAATTTTCTACAGTCTGCTGGAGCATGTTTACTGGCATCGT
GCTAACGATCCCGCGCGTGGTGTTCTGTCCCTCCCCATCTCGGTGGCACC
CACGAAAGTTCTCATTGTCCCGCTCTCCACTCACCAAGACTTTGTTCCCA
TAACAAAGAGAATCACTGAGGATCTCCGTGAGCTAGGCATATCTTGCCGC
GCTGATGAGTCCTCTGCAAGTATCGGAAAGAGGTATGCCCGGAATGACGA
ATTGGGTATCCCGCTCGGTATCACGATCGACTTCGACTCTGTGAAGGATG
GAACGATCACGCTGCGTGAGCGCGATAGTACAAAGCAAGTCCGCGCCTCT
AAAGAGGAAATCCTCGGTGCTATCGAGTCTCTCATTAGCGGTAAGATGAA
TTGGGAGGATGTGTTTGCGAGACTCCCTGAGTTCCTGGGCCAGAGCGGAG
ATGATTAAATGGCTGAACTCACAACCCGCAACGGCGATCCTTTCGACCGT
ACACTTTTTGAGTCACTTTTGAAGCGTCGACTTTTCTATACCGAATCTTT
CGAAATTTACCGAACCTCTGGAAATCTCACAGGCGATAGCAGGGGCCTCT
ACGATTATGGACCTCCAGGGTGTGCGCTTCAGTCAAACATTGTGGACTTA
TGGCGGAAACACTTCGTCCTTCAGGAAGATATGCTCGAACTGGATTGCAC
AATTCTAACACCTGAGGAAGTATTCAAGACCAGTGGTCATGTTGATAAAT
TCGAGGACTGGATGTGCAAGGATTTCAAGAAGGGAGATTTCTTACGGGCC
GACCACCTTATTGGAACGGTTCTTGAGGCGAGACTGAAGGGTGATAAGGT
AGCCAGAGGCATTGCTGCTGAAGGTGACAAAGCTTATGGTGAAGGGGAAA
AGAAGAAGAAGGGTCCCAGAGTGAGCGACATCAAGGCGATGAAGTTGGAG
GATGCTGTCGTCGCGGAATACGAGGAGGTTCTTGCCAAGATCGATAACTA
CGATGGATCCGAGCTCGGCACGTTGATCAAGAAGTATGACATTCGGAACC
CTGATGGAGACGCACCGGTATCATCACCCGTCCCCTTCAATCTCATGTTC
AAGACAACTGTCGGGCCCAGCAGTGCTTCCCCGGGATATCTCCGACCAGA
GACAGCCCAAGGCCAGTTCCTAAACTTCAAGAAACTTCTGGACTACAACC
AGAACTCGATGCCATTTGCGTCTGCTTCTATTGGAAAATCATTTCGCAAT
GAAATTTCCCCTCGTTCTGGCCTGCTCCGCGTGAGAGAATTCCTTATGGC
TGAGATCGAGCACTTCGTCGATCCAGAAGGTGGAAAGAAGCATGCTAAGT
TTGACCTGGTTAAAGATTTGCAACTCAGCTTCCTCGATCGCGCAACCCAG
CTGGGTGGTAAGACCACTCTGCAGAAGACTACAATCGGAGAAGCAGTGTC
CAGTAAGATGGTAGATAATGAGACGCTGGGATACTTTTTGGGCCGCATCT
ACATATTTCTGCTGAAGATCGGCGTCGACACGAATAAAGTCCGATTCCGT
CAACACATGGCAAACGAGATGGCCCATTATGCTACTGACTGCTGGGACGC
CGAGCTCCAGACCACTTACGGCTGGATTGAATGTGTTGGATGTGCGGATC
GCAGCGCCTACGATTTGACCGTCCATTCCAGGAAAACAAAAGAGCCTCTC
GTCGTCCGTGAACCTCGGCGTGAGCCACTGAGAGTAGAAGAGTGGCAAAT
TGACATCAGCAAGCCCAAGCTGGGACCACTCTTCAAGAAAAACGCCAAAG
CTGTGGAAGCGGCGCTGATCGCGCTCTCTCAGTCTGAGCGGGAGTCCCTC
GCTACAATTCTAGAAAAGAAGGGTATCATTACAGTCACTGTCCCCGAGAT
GGCAGAACAGGTTGAGATCTCCAAAGACTTGATTAGTATCGTCAAAAGAA
CGAGAATTGAAAACATCCGCGAATACATCCCCAATGTTATCGAGCCATCA
TTCGGCTTTGGGCGAATTTTCTACAGTCTGCTGGAGCATGTTTACTGGCA
TCGTGCTAACGATCCCGCGCGTGGTGTTCTGTCCCTCCCCATCTCGGTGG
CACCCACGAAAGTTCTCATTGTCCCGCTCTCCACTCACCAAGACTTTGTT
CCCATAACAAAGAGAATCACTGAGGATCTCCGTGAGCTAGGCATATCTTG
CCGCGCTGATGAGTCCTCTGCAAGTATCGGAAAGAGGTATGCCCGGAATG
ACGAATTGGGTATCCCGCTCGGTATCACGATCGACTTCGACTCTGTGAAG
GATGGAACGATCACGCTGCGTGAGCGCGATAGTACAAAGCAAGTCCGCGC
CTCTAAAGAGGAAATCCTCGGTGCTATCGAGTCTCTCATTAGCGGTAAGA
TGAATTGGGAGGATGTGTTTGCGAGACTCCCTGAGTTCCTGGGCCAGAGC
GGAGATGATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
GO:0004820glycine-tRNA ligase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006426glycyl-tRNA aminoacylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_259056M747DRAFT_259056Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259056-T1.exon1M747DRAFT_259056-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_259056-T1.exon2M747DRAFT_259056-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_259056-T1.exon3M747DRAFT_259056-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259056-T1.cdsM747DRAFT_259056-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259056-T1.utr3p1M747DRAFT_259056-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_259056-T1M747DRAFT_259056-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033731
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR002314
DBxrefInterPro:IPR004154
DBxrefInterPro:IPR036621
DBxrefInterPro:IPR002315
DBxrefPFAM:PF03129
Productglycyl-tRNA synthetase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851913.1supercontigKZ851913.1:195444..197759 +
Powered by Drupal